EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000075952 (Gene tree)
Gene ID: -
Gene Symbol: mbd2
Alias: wu:fa97f06|zgc:111862
Full Name: methyl-CpG binding domain protein 2
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 49209 bases
Position: chr5:998296-1047504
Accession: ZDB-GENE-030131-9049
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000154272	MBD	PF01429.19	1.5e-26	1	1
ENSDARP00000136077	MBD	PF01429.19	3.4e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000181112	-	717	-	ENSDARP00000154272	137 (aa)	-	A0A2R8RW36
ENSDART00000159346	-	1253	-	ENSDARP00000136077	191 (aa)	-	A0A0R4INE2

Gene Model

Click here to download ENSDARG00000075952's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000075952's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000075952	mbd2	100	73.723	ENSDARG00000061774	mbd3a	50	73.723

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000075952	mbd2	51	54.286	ENSG00000141644	MBD1	80	60.000	Homo_sapiens
ENSDARG00000075952	mbd2	100	72.263	ENSG00000071655	MBD3	100	58.824	Homo_sapiens
ENSDARG00000075952	mbd2	98	85.821	ENSG00000134046	MBD2	76	83.636	Homo_sapiens
ENSDARG00000075952	mbd2	100	89.781	ENSAPOG00000012600	mbd2	57	90.441	Acanthochromis_polyacanthus
ENSDARG00000075952	mbd2	100	76.642	ENSAPOG00000005056	-	50	77.206	Acanthochromis_polyacanthus
ENSDARG00000075952	mbd2	100	86.957	ENSACIG00000012586	mbd2	53	86.957	Amphilophus_citrinellus
ENSDARG00000075952	mbd2	100	76.642	ENSACIG00000014984	-	50	77.206	Amphilophus_citrinellus
ENSDARG00000075952	mbd2	100	76.642	ENSAOCG00000009832	-	50	77.206	Amphiprion_ocellaris
ENSDARG00000075952	mbd2	100	88.321	ENSAOCG00000003632	-	52	88.971	Amphiprion_ocellaris
ENSDARG00000075952	mbd2	100	76.642	ENSAPEG00000007136	-	50	77.206	Amphiprion_percula
ENSDARG00000075952	mbd2	100	88.321	ENSAPEG00000021428	-	52	88.971	Amphiprion_percula
ENSDARG00000075952	mbd2	100	76.642	ENSATEG00000024182	-	50	77.206	Anabas_testudineus
ENSDARG00000075952	mbd2	100	86.232	ENSATEG00000007353	-	52	86.861	Anabas_testudineus
ENSDARG00000075952	mbd2	100	85.612	ENSACAG00000008739	MBD2	51	86.232	Anolis_carolinensis
ENSDARG00000075952	mbd2	100	86.957	ENSACLG00000004512	mbd2	53	86.957	Astatotilapia_calliptera
ENSDARG00000075952	mbd2	100	77.372	ENSACLG00000023390	-	50	77.941	Astatotilapia_calliptera
ENSDARG00000075952	mbd2	100	90.511	ENSAMXG00000042143	-	52	90.511	Astyanax_mexicanus
ENSDARG00000075952	mbd2	100	71.533	ENSAMXG00000041394	mbd3a	50	72.059	Astyanax_mexicanus
ENSDARG00000075952	mbd2	100	71.533	ENSCJAG00000043037	MBD3	59	71.533	Callithrix_jacchus
ENSDARG00000075952	mbd2	96	86.260	ENSCSAG00000018106	MBD2	50	86.923	Chlorocebus_sabaeus
ENSDARG00000075952	mbd2	100	84.058	ENSCPBG00000025606	MBD2	51	84.672	Chrysemys_picta_bellii
ENSDARG00000075952	mbd2	100	85.507	ENSCSEG00000017016	-	54	86.131	Cynoglossus_semilaevis
ENSDARG00000075952	mbd2	100	75.912	ENSCSEG00000005775	-	50	76.471	Cynoglossus_semilaevis
ENSDARG00000075952	mbd2	100	76.642	ENSCVAG00000005691	-	50	77.206	Cyprinodon_variegatus
ENSDARG00000075952	mbd2	100	84.783	ENSCVAG00000011821	mbd2	52	85.401	Cyprinodon_variegatus
ENSDARG00000075952	mbd2	100	66.667	ENSEBUG00000011092	mbd3a	53	66.667	Eptatretus_burgeri
ENSDARG00000075952	mbd2	100	77.372	ENSEBUG00000005327	MBD2	51	77.941	Eptatretus_burgeri
ENSDARG00000075952	mbd2	100	74.453	ENSELUG00000018490	-	50	75.000	Esox_lucius
ENSDARG00000075952	mbd2	100	75.912	ENSFHEG00000012553	-	50	75.912	Fundulus_heteroclitus
ENSDARG00000075952	mbd2	100	84.783	ENSFHEG00000014371	mbd2	52	85.401	Fundulus_heteroclitus
ENSDARG00000075952	mbd2	96	45.455	ENSGMOG00000000288	-	55	45.802	Gadus_morhua
ENSDARG00000075952	mbd2	100	84.058	ENSGAFG00000007177	mbd2	52	84.672	Gambusia_affinis
ENSDARG00000075952	mbd2	100	86.232	ENSGACG00000018294	mbd2	52	86.861	Gasterosteus_aculeatus
ENSDARG00000075952	mbd2	100	86.957	ENSHBUG00000014830	-	53	86.957	Haplochromis_burtoni
ENSDARG00000075952	mbd2	100	77.372	ENSHBUG00000006135	-	50	77.941	Haplochromis_burtoni
ENSDARG00000075952	mbd2	100	75.182	ENSHCOG00000001410	-	50	75.182	Hippocampus_comes
ENSDARG00000075952	mbd2	100	87.681	ENSHCOG00000016363	-	53	87.681	Hippocampus_comes
ENSDARG00000075952	mbd2	100	75.182	ENSIPUG00000019419	MBD3	50	75.735	Ictalurus_punctatus
ENSDARG00000075952	mbd2	100	93.431	ENSIPUG00000018813	mbd2	52	93.431	Ictalurus_punctatus
ENSDARG00000075952	mbd2	100	76.642	ENSKMAG00000003388	-	50	77.206	Kryptolebias_marmoratus
ENSDARG00000075952	mbd2	100	83.333	ENSKMAG00000006501	mbd2	52	83.942	Kryptolebias_marmoratus
ENSDARG00000075952	mbd2	100	86.131	ENSLBEG00000021918	mbd2	51	86.765	Labrus_bergylta
ENSDARG00000075952	mbd2	100	76.642	ENSLBEG00000018071	-	50	77.206	Labrus_bergylta
ENSDARG00000075952	mbd2	100	92.701	ENSLOCG00000003370	MBD2	52	92.701	Lepisosteus_oculatus
ENSDARG00000075952	mbd2	96	86.260	ENSMMUG00000003136	MBD2	50	86.923	Macaca_mulatta
ENSDARG00000075952	mbd2	100	76.642	ENSMAMG00000019593	-	50	77.206	Mastacembelus_armatus
ENSDARG00000075952	mbd2	100	88.406	ENSMAMG00000018791	mbd2	52	89.051	Mastacembelus_armatus
ENSDARG00000075952	mbd2	100	86.957	ENSMZEG00005001327	mbd2	52	87.591	Maylandia_zebra
ENSDARG00000075952	mbd2	100	77.372	ENSMZEG00005006883	-	50	77.941	Maylandia_zebra
ENSDARG00000075952	mbd2	74	82.353	ENSMGAG00000009222	-	100	82.353	Meleagris_gallopavo
ENSDARG00000075952	mbd2	100	89.130	ENSMMOG00000011781	-	52	89.130	Mola_mola
ENSDARG00000075952	mbd2	100	76.642	ENSMMOG00000000372	-	50	77.206	Mola_mola
ENSDARG00000075952	mbd2	100	76.642	ENSMALG00000007914	MBD3	50	77.206	Monopterus_albus
ENSDARG00000075952	mbd2	100	86.957	ENSMALG00000001538	mbd2	52	87.591	Monopterus_albus
ENSDARG00000075952	mbd2	98	84.328	MGP_SPRETEiJ_G0023301	Mbd2	50	85.385	Mus_spretus
ENSDARG00000075952	mbd2	95	85.385	ENSNGAG00000018354	Mbd2	59	85.366	Nannospalax_galili
ENSDARG00000075952	mbd2	100	77.372	ENSNBRG00000011072	-	50	77.941	Neolamprologus_brichardi
ENSDARG00000075952	mbd2	100	86.957	ENSNBRG00000003778	mbd2	52	87.591	Neolamprologus_brichardi
ENSDARG00000075952	mbd2	100	72.993	ENSNLEG00000001734	MBD3	52	72.993	Nomascus_leucogenys
ENSDARG00000075952	mbd2	100	86.957	ENSONIG00000012635	mbd2	52	87.591	Oreochromis_niloticus
ENSDARG00000075952	mbd2	77	81.905	ENSOANG00000030623	-	83	81.905	Ornithorhynchus_anatinus
ENSDARG00000075952	mbd2	100	71.528	ENSORLG00000004850	-	51	72.028	Oryzias_latipes
ENSDARG00000075952	mbd2	100	85.507	ENSORLG00000024771	mbd2	54	85.507	Oryzias_latipes
ENSDARG00000075952	mbd2	100	75.912	ENSORLG00020003297	-	50	76.471	Oryzias_latipes_hni
ENSDARG00000075952	mbd2	100	75.912	ENSORLG00015021178	-	50	76.471	Oryzias_latipes_hsok
ENSDARG00000075952	mbd2	100	85.507	ENSORLG00015014273	mbd2	56	85.507	Oryzias_latipes_hsok
ENSDARG00000075952	mbd2	100	85.507	ENSOMEG00000004312	mbd2	53	85.507	Oryzias_melastigma
ENSDARG00000075952	mbd2	100	75.912	ENSOMEG00000005272	-	50	76.471	Oryzias_melastigma
ENSDARG00000075952	mbd2	99	60.377	ENSOGAG00000024563	MBD3	51	61.538	Otolemur_garnettii
ENSDARG00000075952	mbd2	100	73.723	ENSPKIG00000018562	mbd3a	50	74.265	Paramormyrops_kingsleyae
ENSDARG00000075952	mbd2	100	86.861	ENSPKIG00000015756	mbd2	52	87.500	Paramormyrops_kingsleyae
ENSDARG00000075952	mbd2	100	76.642	ENSPMGG00000014713	-	50	77.206	Periophthalmus_magnuspinnatus
ENSDARG00000075952	mbd2	100	84.672	ENSPMGG00000012079	-	52	85.294	Periophthalmus_magnuspinnatus
ENSDARG00000075952	mbd2	100	84.783	ENSPFOG00000003939	mbd2	52	85.401	Poecilia_formosa
ENSDARG00000075952	mbd2	100	84.783	ENSPLAG00000020914	mbd2	52	85.401	Poecilia_latipinna
ENSDARG00000075952	mbd2	100	76.642	ENSPLAG00000009897	-	50	77.206	Poecilia_latipinna
ENSDARG00000075952	mbd2	100	76.642	ENSPMEG00000004758	-	50	77.206	Poecilia_mexicana
ENSDARG00000075952	mbd2	100	84.058	ENSPREG00000013458	mbd2	52	84.672	Poecilia_reticulata
ENSDARG00000075952	mbd2	100	76.642	ENSPREG00000008542	-	50	77.206	Poecilia_reticulata
ENSDARG00000075952	mbd2	100	77.372	ENSPNYG00000017202	-	50	77.941	Pundamilia_nyererei
ENSDARG00000075952	mbd2	100	86.957	ENSPNYG00000003862	mbd2	53	86.957	Pundamilia_nyererei
ENSDARG00000075952	mbd2	100	72.993	ENSPNAG00000027268	mbd3a	50	73.529	Pygocentrus_nattereri
ENSDARG00000075952	mbd2	100	75.182	ENSPNAG00000017398	-	50	75.735	Pygocentrus_nattereri
ENSDARG00000075952	mbd2	100	91.241	ENSPNAG00000009910	mbd2	52	91.241	Pygocentrus_nattereri
ENSDARG00000075952	mbd2	100	90.511	ENSSFOG00015020812	mbd2	51	91.176	Scleropages_formosus
ENSDARG00000075952	mbd2	100	87.681	ENSSMAG00000011764	mbd2	52	88.321	Scophthalmus_maximus
ENSDARG00000075952	mbd2	100	76.642	ENSSMAG00000011344	-	50	77.206	Scophthalmus_maximus
ENSDARG00000075952	mbd2	100	89.130	ENSSDUG00000017686	mbd2	52	89.781	Seriola_dumerili
ENSDARG00000075952	mbd2	100	76.642	ENSSDUG00000005274	-	50	77.206	Seriola_dumerili
ENSDARG00000075952	mbd2	100	76.642	ENSSLDG00000018975	-	50	77.206	Seriola_lalandi_dorsalis
ENSDARG00000075952	mbd2	100	89.855	ENSSLDG00000016580	mbd2	52	90.511	Seriola_lalandi_dorsalis
ENSDARG00000075952	mbd2	100	86.957	ENSSPAG00000013731	-	52	87.591	Stegastes_partitus
ENSDARG00000075952	mbd2	100	76.642	ENSSPAG00000015752	-	50	77.206	Stegastes_partitus
ENSDARG00000075952	mbd2	78	69.159	ENSTGUG00000000202	-	53	69.159	Taeniopygia_guttata
ENSDARG00000075952	mbd2	100	77.372	ENSTRUG00000019805	-	50	77.941	Takifugu_rubripes
ENSDARG00000075952	mbd2	100	84.058	ENSTRUG00000006522	mbd2	52	84.672	Takifugu_rubripes
ENSDARG00000075952	mbd2	100	84.783	ENSTNIG00000003709	-	52	85.401	Tetraodon_nigroviridis
ENSDARG00000075952	mbd2	100	78.102	ENSTNIG00000010627	-	50	78.676	Tetraodon_nigroviridis
ENSDARG00000075952	mbd2	100	83.942	ENSVVUG00000014700	MBD2	50	86.154	Vulpes_vulpes
ENSDARG00000075952	mbd2	100	65.605	ENSXETG00000013593	mbd3	52	67.308	Xenopus_tropicalis
ENSDARG00000075952	mbd2	100	83.942	ENSXETG00000013688	mbd2	52	83.942	Xenopus_tropicalis
ENSDARG00000075952	mbd2	100	84.058	ENSXCOG00000007101	mbd2	52	84.672	Xiphophorus_couchianus
ENSDARG00000075952	mbd2	100	76.642	ENSXMAG00000012716	-	50	77.206	Xiphophorus_maculatus
ENSDARG00000075952	mbd2	100	84.058	ENSXMAG00000003932	mbd2	52	84.672	Xiphophorus_maculatus