EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000076391 (Gene tree)
Gene ID: 797865
Gene Symbol: npm2a
Alias: im:7155659
Full Name: nucleophosmin/nucleoplasmin%2C 2a
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 5648 bases
Position: chr8:37749263-37754910
Accession: ZDB-GENE-060810-57
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000099178	Nucleoplasmin	PF03066.15	7.6e-23	1	1
ENSDARP00000116605	Nucleoplasmin	PF03066.15	7.6e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000108556	-	895	-	ENSDARP00000099178	156 (aa)	-	B0UYT8
ENSDART00000147942	-	941	XM_021478324	ENSDARP00000116605	156 (aa)	XP_021333999	B0UYT8

Gene Model

Click here to download ENSDARG00000076391's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000076391's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000076391	npm2a	63	31.683	ENSDARG00000014329	npm1a	63	31.683
ENSDARG00000076391	npm2a	63	44.554	ENSDARG00000053963	npm2b	55	44.554
ENSDARG00000076391	npm2a	62	35.644	ENSDARG00000103594	npm3	61	36.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000076391	npm2a	69	38.793	ENSG00000158806	NPM2	83	32.927	Homo_sapiens
ENSDARG00000076391	npm2a	76	38.400	ENSACAG00000000163	-	50	39.000	Anolis_carolinensis
ENSDARG00000076391	npm2a	69	37.069	ENSANAG00000038138	-	76	36.893	Aotus_nancymaae
ENSDARG00000076391	npm2a	74	33.858	ENSANAG00000028994	-	52	33.858	Aotus_nancymaae
ENSDARG00000076391	npm2a	85	73.485	ENSAMXG00000001084	npm2a	75	77.982	Astyanax_mexicanus
ENSDARG00000076391	npm2a	63	40.000	ENSAMXG00000038475	npm2b	53	41.000	Astyanax_mexicanus
ENSDARG00000076391	npm2a	69	33.628	ENSBTAG00000046918	NPM2	52	35.644	Bos_taurus
ENSDARG00000076391	npm2a	69	36.522	ENSCJAG00000020389	NPM2	74	36.634	Callithrix_jacchus
ENSDARG00000076391	npm2a	72	36.441	ENSCAFG00020015194	-	51	38.095	Canis_lupus_dingo
ENSDARG00000076391	npm2a	65	38.318	ENSCAFG00020015227	-	50	38.095	Canis_lupus_dingo
ENSDARG00000076391	npm2a	68	33.929	ENSCHIG00000026056	NPM2	51	35.644	Capra_hircus
ENSDARG00000076391	npm2a	70	39.831	ENSTSYG00000026275	NPM2	76	39.048	Carlito_syrichta
ENSDARG00000076391	npm2a	60	32.979	ENSCAPG00000006057	NPM2	52	32.632	Cavia_aperea
ENSDARG00000076391	npm2a	60	32.979	ENSCPOG00000039799	NPM2	52	32.632	Cavia_porcellus
ENSDARG00000076391	npm2a	82	36.765	ENSCCAG00000035076	NPM2	76	36.893	Cebus_capucinus
ENSDARG00000076391	npm2a	69	37.931	ENSCATG00000031833	NPM2	76	37.864	Cercocebus_atys
ENSDARG00000076391	npm2a	68	37.719	ENSCLAG00000013600	NPM2	53	36.893	Chinchilla_lanigera
ENSDARG00000076391	npm2a	69	37.069	ENSCSAG00000016588	NPM2	54	36.893	Chlorocebus_sabaeus
ENSDARG00000076391	npm2a	69	37.069	ENSCANG00000040109	NPM2	76	36.893	Colobus_angolensis_palliatus
ENSDARG00000076391	npm2a	69	39.655	ENSEASG00005018856	NPM2	53	41.584	Equus_asinus_asinus
ENSDARG00000076391	npm2a	73	62.393	ENSELUG00000017306	-	83	61.111	Esox_lucius
ENSDARG00000076391	npm2a	63	39.000	ENSELUG00000004822	npm2b	58	39.000	Esox_lucius
ENSDARG00000076391	npm2a	72	35.246	ENSFDAG00000007971	NPM2	58	35.455	Fukomys_damarensis
ENSDARG00000076391	npm2a	64	42.157	ENSGALG00000050870	NPM2	52	42.157	Gallus_gallus
ENSDARG00000076391	npm2a	88	44.681	ENSGALG00000054664	-	73	49.550	Gallus_gallus
ENSDARG00000076391	npm2a	69	38.793	ENSGGOG00000007071	NPM2	76	38.835	Gorilla_gorilla
ENSDARG00000076391	npm2a	86	73.134	ENSIPUG00000010101	npm2a	87	73.134	Ictalurus_punctatus
ENSDARG00000076391	npm2a	62	41.837	ENSIPUG00000013175	npm2b	57	41.837	Ictalurus_punctatus
ENSDARG00000076391	npm2a	82	38.971	ENSLACG00000016196	NPM2	70	41.322	Latimeria_chalumnae
ENSDARG00000076391	npm2a	63	39.806	ENSLOCG00000014878	npm2b	53	39.806	Lepisosteus_oculatus
ENSDARG00000076391	npm2a	69	37.931	ENSMFAG00000032098	NPM2	76	37.864	Macaca_fascicularis
ENSDARG00000076391	npm2a	69	37.931	ENSMMUG00000002034	NPM2	76	37.864	Macaca_mulatta
ENSDARG00000076391	npm2a	69	37.931	ENSMNEG00000010994	NPM2	76	37.864	Macaca_nemestrina
ENSDARG00000076391	npm2a	69	37.931	ENSMLEG00000030071	NPM2	76	37.864	Mandrillus_leucophaeus
ENSDARG00000076391	npm2a	71	37.069	ENSMAUG00000004228	Npm2	51	36.111	Mesocricetus_auratus
ENSDARG00000076391	npm2a	70	35.897	ENSMICG00000030722	-	75	36.893	Microcebus_murinus
ENSDARG00000076391	npm2a	81	34.532	ENSMOCG00000017251	Npm2	66	35.200	Microtus_ochrogaster
ENSDARG00000076391	npm2a	62	38.235	ENSMODG00000009677	-	52	39.048	Monodelphis_domestica
ENSDARG00000076391	npm2a	71	38.938	ENSMUSG00000047911	Npm2	57	40.000	Mus_musculus
ENSDARG00000076391	npm2a	79	40.909	ENSMPUG00000004012	NPM2	52	42.241	Mustela_putorius_furo
ENSDARG00000076391	npm2a	81	37.778	ENSNGAG00000022056	Npm2	55	37.931	Nannospalax_galili
ENSDARG00000076391	npm2a	69	37.069	ENSNLEG00000035765	NPM2	76	36.893	Nomascus_leucogenys
ENSDARG00000076391	npm2a	71	36.752	ENSOPRG00000012940	NPM2	55	36.752	Ochotona_princeps
ENSDARG00000076391	npm2a	72	34.677	ENSODEG00000006433	NPM2	51	34.513	Octodon_degus
ENSDARG00000076391	npm2a	79	37.857	ENSOGAG00000011562	NPM2	57	39.516	Otolemur_garnettii
ENSDARG00000076391	npm2a	69	38.793	ENSPPAG00000040749	NPM2	76	38.835	Pan_paniscus
ENSDARG00000076391	npm2a	69	37.931	ENSPPRG00000022157	NPM2	74	39.604	Panthera_pardus
ENSDARG00000076391	npm2a	60	39.000	ENSPTIG00000011553	NPM2	82	39.000	Panthera_tigris_altaica
ENSDARG00000076391	npm2a	69	38.793	ENSPTRG00000020045	NPM2	76	38.835	Pan_troglodytes
ENSDARG00000076391	npm2a	69	37.931	ENSPANG00000031080	NPM2	76	37.864	Papio_anubis
ENSDARG00000076391	npm2a	69	60.909	ENSPKIG00000007241	npm2a	71	60.000	Paramormyrops_kingsleyae
ENSDARG00000076391	npm2a	63	36.275	ENSPKIG00000009700	npm2b	52	36.275	Paramormyrops_kingsleyae
ENSDARG00000076391	npm2a	76	39.516	ENSPSIG00000007722	NPM2	51	43.269	Pelodiscus_sinensis
ENSDARG00000076391	npm2a	75	35.156	ENSPCIG00000012716	-	50	35.185	Phascolarctos_cinereus
ENSDARG00000076391	npm2a	70	36.752	ENSPCOG00000018483	-	75	37.864	Propithecus_coquereli
ENSDARG00000076391	npm2a	63	42.574	ENSPNAG00000001303	npm2b	54	42.574	Pygocentrus_nattereri
ENSDARG00000076391	npm2a	85	74.242	ENSPNAG00000018186	npm2a	92	73.333	Pygocentrus_nattereri
ENSDARG00000076391	npm2a	69	37.069	ENSRBIG00000029235	NPM2	76	36.893	Rhinopithecus_bieti
ENSDARG00000076391	npm2a	69	37.069	ENSRROG00000044119	NPM2	76	36.893	Rhinopithecus_roxellana
ENSDARG00000076391	npm2a	82	37.500	ENSSBOG00000025301	NPM2	75	38.235	Saimiri_boliviensis_boliviensis
ENSDARG00000076391	npm2a	63	42.574	ENSSFOG00015010466	npm2b	58	42.157	Scleropages_formosus
ENSDARG00000076391	npm2a	60	41.237	ENSSPUG00000011509	NPM2	68	41.237	Sphenodon_punctatus
ENSDARG00000076391	npm2a	69	39.655	ENSSSCG00000009610	NPM2	55	39.604	Sus_scrofa
ENSDARG00000076391	npm2a	74	42.735	ENSXETG00000016499	-	81	45.631	Xenopus_tropicalis
ENSDARG00000076391	npm2a	73	42.373	ENSXETG00000010542	npm2	57	45.631	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003682	chromatin binding	21873635.	IBA	Function
GO:0005654	nucleoplasm	21873635.	IBA	Component
GO:0005730	nucleolus	21873635.	IBA	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0006338	chromatin remodeling	21873635.	IBA	Process
GO:0008150	biological_process	-	ND	Process
GO:0042393	histone binding	21873635.	IBA	Function