EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000076584 (Gene tree)
Gene ID: 560290
Gene Symbol: patz1
Alias: -
Full Name: POZ (BTB) and AT hook containing zinc finger 1
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 17094 bases
Position: chr6:40951227-40968320
Accession: ZDB-GENE-111223-4
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000155487	zf-C2H2	PF00096.26	5.6e-29	1	5
ENSDARP00000155487	zf-C2H2	PF00096.26	5.6e-29	2	5
ENSDARP00000155487	zf-C2H2	PF00096.26	5.6e-29	3	5
ENSDARP00000155487	zf-C2H2	PF00096.26	5.6e-29	4	5
ENSDARP00000155487	zf-C2H2	PF00096.26	5.6e-29	5	5
ENSDARP00000129407	zf-C2H2	PF00096.26	1.5e-22	1	4
ENSDARP00000129407	zf-C2H2	PF00096.26	1.5e-22	2	4
ENSDARP00000129407	zf-C2H2	PF00096.26	1.5e-22	3	4
ENSDARP00000129407	zf-C2H2	PF00096.26	1.5e-22	4	4
ENSDARP00000155487	zf-met	PF12874.7	7.4e-12	1	2
ENSDARP00000155487	zf-met	PF12874.7	7.4e-12	2	2
ENSDARP00000129407	zf-met	PF12874.7	1.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000189219	-	2109	-	ENSDARP00000155487	702 (aa)	-	A0A2R8QM13
ENSDART00000156660	-	6848	XM_009302608	ENSDARP00000129407	625 (aa)	XP_009300883	X1WGP9

Gene Model

Click here to download ENSDARG00000076584's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000076584's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000076584	patz1	98	58.511	ENSG00000100105	PATZ1	97	60.679	Homo_sapiens
ENSDARG00000076584	patz1	100	68.548	ENSAPOG00000018447	patz1	100	68.548	Acanthochromis_polyacanthus
ENSDARG00000076584	patz1	98	55.429	ENSAMEG00000007074	PATZ1	97	55.714	Ailuropoda_melanoleuca
ENSDARG00000076584	patz1	100	67.742	ENSACIG00000016779	patz1	100	67.742	Amphilophus_citrinellus
ENSDARG00000076584	patz1	100	67.123	ENSAPEG00000013354	patz1	100	67.123	Amphiprion_percula
ENSDARG00000076584	patz1	100	69.512	ENSATEG00000011260	patz1	100	69.512	Anabas_testudineus
ENSDARG00000076584	patz1	87	54.817	ENSAPLG00000003934	PATZ1	99	54.817	Anas_platyrhynchos
ENSDARG00000076584	patz1	98	58.511	ENSANAG00000029603	PATZ1	97	60.679	Aotus_nancymaae
ENSDARG00000076584	patz1	100	77.922	ENSAMXG00000002273	patz1	100	77.922	Astyanax_mexicanus
ENSDARG00000076584	patz1	98	58.815	ENSBTAG00000005478	PATZ1	97	60.679	Bos_taurus
ENSDARG00000076584	patz1	98	58.511	ENSCJAG00000010978	PATZ1	97	60.679	Callithrix_jacchus
ENSDARG00000076584	patz1	98	58.967	ENSCAFG00000013087	PATZ1	96	60.679	Canis_familiaris
ENSDARG00000076584	patz1	98	58.815	ENSCHIG00000020203	PATZ1	97	60.679	Capra_hircus
ENSDARG00000076584	patz1	98	58.511	ENSTSYG00000033183	PATZ1	97	60.679	Carlito_syrichta
ENSDARG00000076584	patz1	98	58.511	ENSCCAG00000028772	PATZ1	97	60.679	Cebus_capucinus
ENSDARG00000076584	patz1	98	58.663	ENSCATG00000006101	PATZ1	97	60.679	Cercocebus_atys
ENSDARG00000076584	patz1	99	56.749	ENSCPBG00000011277	PATZ1	99	57.576	Chrysemys_picta_bellii
ENSDARG00000076584	patz1	98	58.663	ENSCANG00000024972	PATZ1	97	60.679	Colobus_angolensis_palliatus
ENSDARG00000076584	patz1	98	57.447	ENSCGRG00001004071	Patz1	97	58.683	Cricetulus_griseus_chok1gshd
ENSDARG00000076584	patz1	92	57.166	ENSCGRG00000004814	Patz1	99	58.386	Cricetulus_griseus_crigri
ENSDARG00000076584	patz1	100	59.534	ENSCSEG00000001385	patz1	96	67.308	Cynoglossus_semilaevis
ENSDARG00000076584	patz1	100	67.178	ENSCVAG00000007684	patz1	100	69.262	Cyprinodon_variegatus
ENSDARG00000076584	patz1	88	54.101	ENSDNOG00000003183	PATZ1	98	54.574	Dasypus_novemcinctus
ENSDARG00000076584	patz1	98	58.663	ENSDORG00000023834	Patz1	97	60.679	Dipodomys_ordii
ENSDARG00000076584	patz1	98	58.815	ENSECAG00000025030	PATZ1	97	60.679	Equus_caballus
ENSDARG00000076584	patz1	100	73.022	ENSELUG00000002333	patz1	100	73.022	Esox_lucius
ENSDARG00000076584	patz1	98	58.967	ENSFCAG00000030253	PATZ1	97	60.679	Felis_catus
ENSDARG00000076584	patz1	88	55.099	ENSFALG00000007450	PATZ1	99	55.099	Ficedula_albicollis
ENSDARG00000076584	patz1	96	51.809	ENSFDAG00000005614	PATZ1	99	52.180	Fukomys_damarensis
ENSDARG00000076584	patz1	100	66.514	ENSFHEG00000014755	patz1	100	66.971	Fundulus_heteroclitus
ENSDARG00000076584	patz1	99	59.795	ENSGMOG00000001062	patz1	99	60.234	Gadus_morhua
ENSDARG00000076584	patz1	99	54.839	ENSGALG00000006934	PATZ1	99	54.839	Gallus_gallus
ENSDARG00000076584	patz1	100	69.182	ENSGAFG00000010053	patz1	100	67.879	Gambusia_affinis
ENSDARG00000076584	patz1	86	57.118	ENSGAGG00000003214	PATZ1	99	58.531	Gopherus_agassizii
ENSDARG00000076584	patz1	98	58.511	ENSGGOG00000017171	PATZ1	97	60.679	Gorilla_gorilla
ENSDARG00000076584	patz1	100	66.771	ENSHCOG00000017644	patz1	99	65.995	Hippocampus_comes
ENSDARG00000076584	patz1	100	76.164	ENSIPUG00000017653	patz1	99	76.164	Ictalurus_punctatus
ENSDARG00000076584	patz1	98	58.967	ENSSTOG00000020707	PATZ1	97	60.757	Ictidomys_tridecemlineatus
ENSDARG00000076584	patz1	98	57.594	ENSJJAG00000015259	Patz1	96	59.646	Jaculus_jaculus
ENSDARG00000076584	patz1	100	63.650	ENSKMAG00000008157	patz1	100	68.868	Kryptolebias_marmoratus
ENSDARG00000076584	patz1	98	56.769	ENSLAFG00000002317	PATZ1	97	56.769	Loxodonta_africana
ENSDARG00000076584	patz1	98	58.663	ENSMFAG00000040968	PATZ1	97	60.679	Macaca_fascicularis
ENSDARG00000076584	patz1	98	58.663	ENSMNEG00000037588	PATZ1	97	60.679	Macaca_nemestrina
ENSDARG00000076584	patz1	98	58.663	ENSMLEG00000030938	PATZ1	97	60.679	Mandrillus_leucophaeus
ENSDARG00000076584	patz1	100	67.428	ENSMAMG00000023652	patz1	100	67.428	Mastacembelus_armatus
ENSDARG00000076584	patz1	87	51.907	ENSMGAG00000008439	PATZ1	99	51.907	Meleagris_gallopavo
ENSDARG00000076584	patz1	98	58.663	ENSMAUG00000004129	Patz1	97	60.679	Mesocricetus_auratus
ENSDARG00000076584	patz1	98	58.663	ENSMICG00000005430	PATZ1	97	60.679	Microcebus_murinus
ENSDARG00000076584	patz1	98	58.663	ENSMOCG00000014488	Patz1	97	60.679	Microtus_ochrogaster
ENSDARG00000076584	patz1	100	63.477	ENSMMOG00000021679	patz1	100	63.477	Mola_mola
ENSDARG00000076584	patz1	100	67.852	ENSMALG00000021172	patz1	100	68.388	Monopterus_albus
ENSDARG00000076584	patz1	98	58.663	MGP_CAROLIEiJ_G0016007	Patz1	97	60.679	Mus_caroli
ENSDARG00000076584	patz1	98	58.815	ENSMUSG00000020453	Patz1	97	60.679	Mus_musculus
ENSDARG00000076584	patz1	98	58.815	MGP_PahariEiJ_G0016884	Patz1	97	60.679	Mus_pahari
ENSDARG00000076584	patz1	98	58.815	MGP_SPRETEiJ_G0016846	Patz1	97	60.679	Mus_spretus
ENSDARG00000076584	patz1	98	59.119	ENSMLUG00000009942	PATZ1	97	60.679	Myotis_lucifugus
ENSDARG00000076584	patz1	98	58.815	ENSNGAG00000010268	Patz1	97	60.679	Nannospalax_galili
ENSDARG00000076584	patz1	100	70.146	ENSNBRG00000016032	patz1	100	70.146	Neolamprologus_brichardi
ENSDARG00000076584	patz1	74	52.941	ENSMEUG00000016293	PATZ1	96	53.474	Notamacropus_eugenii
ENSDARG00000076584	patz1	98	58.815	ENSODEG00000003589	PATZ1	97	60.679	Octodon_degus
ENSDARG00000076584	patz1	100	67.123	ENSONIG00000004248	patz1	100	67.123	Oreochromis_niloticus
ENSDARG00000076584	patz1	98	55.380	ENSOANG00000014654	PATZ1	97	55.667	Ornithorhynchus_anatinus
ENSDARG00000076584	patz1	100	65.923	ENSORLG00020010937	patz1	99	67.556	Oryzias_latipes_hni
ENSDARG00000076584	patz1	100	66.057	ENSORLG00015007396	patz1	100	66.057	Oryzias_latipes_hsok
ENSDARG00000076584	patz1	100	69.684	ENSOMEG00000006636	patz1	100	68.238	Oryzias_melastigma
ENSDARG00000076584	patz1	98	55.143	ENSOGAG00000027905	PATZ1	97	55.571	Otolemur_garnettii
ENSDARG00000076584	patz1	98	58.511	ENSPPAG00000033227	PATZ1	97	60.679	Pan_paniscus
ENSDARG00000076584	patz1	98	58.967	ENSPPRG00000001573	PATZ1	97	60.679	Panthera_pardus
ENSDARG00000076584	patz1	87	54.649	ENSPTIG00000007937	PATZ1	90	54.870	Panthera_tigris_altaica
ENSDARG00000076584	patz1	98	58.511	ENSPTRG00000014268	PATZ1	97	60.679	Pan_troglodytes
ENSDARG00000076584	patz1	98	58.663	ENSPANG00000006821	PATZ1	96	60.679	Papio_anubis
ENSDARG00000076584	patz1	100	68.972	ENSPKIG00000019584	patz1	100	69.034	Paramormyrops_kingsleyae
ENSDARG00000076584	patz1	57	58.516	ENSPSIG00000016553	-	91	57.843	Pelodiscus_sinensis
ENSDARG00000076584	patz1	76	69.517	ENSPSIG00000011562	-	99	77.251	Pelodiscus_sinensis
ENSDARG00000076584	patz1	100	63.095	ENSPMGG00000010196	patz1	100	63.095	Periophthalmus_magnuspinnatus
ENSDARG00000076584	patz1	98	58.815	ENSPEMG00000005321	Patz1	97	60.757	Peromyscus_maniculatus_bairdii
ENSDARG00000076584	patz1	100	66.819	ENSPLAG00000010425	patz1	100	68.283	Poecilia_latipinna
ENSDARG00000076584	patz1	100	66.921	ENSPMEG00000000255	patz1	100	70.084	Poecilia_mexicana
ENSDARG00000076584	patz1	100	62.446	ENSPREG00000002440	patz1	100	63.075	Poecilia_reticulata
ENSDARG00000076584	patz1	98	54.857	ENSPPYG00000011732	PATZ1	97	55.429	Pongo_abelii
ENSDARG00000076584	patz1	98	58.663	ENSPCOG00000019729	PATZ1	97	60.679	Propithecus_coquereli
ENSDARG00000076584	patz1	98	55.286	ENSPVAG00000001749	PATZ1	97	55.714	Pteropus_vampyrus
ENSDARG00000076584	patz1	100	67.481	ENSPNYG00000013542	patz1	100	67.481	Pundamilia_nyererei
ENSDARG00000076584	patz1	87	64.516	ENSPNAG00000017222	patz1	100	64.516	Pygocentrus_nattereri
ENSDARG00000076584	patz1	98	58.663	ENSRBIG00000044231	PATZ1	97	60.679	Rhinopithecus_bieti
ENSDARG00000076584	patz1	98	58.663	ENSRROG00000037155	PATZ1	97	60.679	Rhinopithecus_roxellana
ENSDARG00000076584	patz1	98	58.511	ENSSBOG00000003894	PATZ1	97	60.679	Saimiri_boliviensis_boliviensis
ENSDARG00000076584	patz1	82	97.436	ENSSFOG00015013244	patz1	78	97.436	Scleropages_formosus
ENSDARG00000076584	patz1	98	55.588	ENSSPUG00000015298	PATZ1	95	57.336	Sphenodon_punctatus
ENSDARG00000076584	patz1	86	58.730	ENSSSCG00000010027	PATZ1	99	60.488	Sus_scrofa
ENSDARG00000076584	patz1	100	65.284	ENSTRUG00000015366	patz1	100	65.284	Takifugu_rubripes
ENSDARG00000076584	patz1	98	55.143	ENSTTRG00000010279	PATZ1	97	55.571	Tursiops_truncatus
ENSDARG00000076584	patz1	98	58.967	ENSUAMG00000015014	PATZ1	97	60.679	Ursus_americanus
ENSDARG00000076584	patz1	99	53.509	ENSXETG00000004190	patz1	99	54.386	Xenopus_tropicalis
ENSDARG00000076584	patz1	100	66.311	ENSXMAG00000015531	patz1	100	69.874	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0046872	metal ion binding	-	IEA	Function