EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000076585 (Gene tree)
Gene ID: 569198
Gene Symbol: si:ch211-113e8.11
Alias: -
Full Name: si:ch211-113e8.11
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 7432 bases
Position: chr1:40107811-40115242
Accession: ZDB-GENE-090313-12
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000098389	zf-CCCH	PF00642.24	5.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000113954	-	3802	XM_692566	ENSDARP00000098389	231 (aa)	XP_697658	F1QGQ9

Gene Model

Click here to download ENSDARG00000076585's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000076585's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000076585	si:ch211-113e8.11	98	46.275	ENSAPOG00000010990	si:ch211-113e8.11	96	45.200	Acanthochromis_polyacanthus
ENSDARG00000076585	si:ch211-113e8.11	64	56.494	ENSACIG00000011566	si:ch211-113e8.11	68	58.209	Amphilophus_citrinellus
ENSDARG00000076585	si:ch211-113e8.11	98	46.032	ENSAOCG00000022156	si:ch211-113e8.11	96	43.750	Amphiprion_ocellaris
ENSDARG00000076585	si:ch211-113e8.11	98	46.032	ENSAPEG00000018284	si:ch211-113e8.11	96	43.922	Amphiprion_percula
ENSDARG00000076585	si:ch211-113e8.11	98	49.587	ENSATEG00000018391	si:ch211-113e8.11	95	47.899	Anabas_testudineus
ENSDARG00000076585	si:ch211-113e8.11	97	50.000	ENSACLG00000017011	si:ch211-113e8.11	95	48.276	Astatotilapia_calliptera
ENSDARG00000076585	si:ch211-113e8.11	97	50.000	ENSAMXG00000000733	si:ch211-113e8.11	95	47.222	Astyanax_mexicanus
ENSDARG00000076585	si:ch211-113e8.11	99	49.206	ENSCSEG00000004538	si:ch211-113e8.11	96	46.154	Cynoglossus_semilaevis
ENSDARG00000076585	si:ch211-113e8.11	98	48.560	ENSCVAG00000020156	si:ch211-113e8.11	95	44.856	Cyprinodon_variegatus
ENSDARG00000076585	si:ch211-113e8.11	68	32.515	FBgn0259728	CG42382	61	31.200	Drosophila_melanogaster
ENSDARG00000076585	si:ch211-113e8.11	98	49.416	ENSELUG00000001130	si:ch211-113e8.11	96	46.640	Esox_lucius
ENSDARG00000076585	si:ch211-113e8.11	98	48.718	ENSFHEG00000007870	si:ch211-113e8.11	95	46.983	Fundulus_heteroclitus
ENSDARG00000076585	si:ch211-113e8.11	97	48.523	ENSGAFG00000020570	si:ch211-113e8.11	95	48.945	Gambusia_affinis
ENSDARG00000076585	si:ch211-113e8.11	97	50.215	ENSHBUG00000003552	si:ch211-113e8.11	95	46.957	Haplochromis_burtoni
ENSDARG00000076585	si:ch211-113e8.11	99	45.228	ENSHCOG00000002041	si:ch211-113e8.11	96	42.500	Hippocampus_comes
ENSDARG00000076585	si:ch211-113e8.11	98	56.223	ENSIPUG00000002260	si:ch211-113e8.11	96	53.814	Ictalurus_punctatus
ENSDARG00000076585	si:ch211-113e8.11	98	47.718	ENSKMAG00000000086	si:ch211-113e8.11	95	43.333	Kryptolebias_marmoratus
ENSDARG00000076585	si:ch211-113e8.11	99	42.146	ENSLBEG00000008353	si:ch211-113e8.11	97	41.132	Labrus_bergylta
ENSDARG00000076585	si:ch211-113e8.11	61	44.366	ENSLACG00000004304	si:ch211-113e8.11	62	45.161	Latimeria_chalumnae
ENSDARG00000076585	si:ch211-113e8.11	70	52.023	ENSMAMG00000019098	si:ch211-113e8.11	53	56.061	Mastacembelus_armatus
ENSDARG00000076585	si:ch211-113e8.11	97	50.655	ENSMZEG00005023658	si:ch211-113e8.11	95	48.908	Maylandia_zebra
ENSDARG00000076585	si:ch211-113e8.11	98	44.978	ENSMMOG00000007254	si:ch211-113e8.11	60	53.906	Mola_mola
ENSDARG00000076585	si:ch211-113e8.11	98	44.664	ENSMALG00000005110	si:ch211-113e8.11	96	43.089	Monopterus_albus
ENSDARG00000076585	si:ch211-113e8.11	97	50.000	ENSNBRG00000015060	si:ch211-113e8.11	95	47.845	Neolamprologus_brichardi
ENSDARG00000076585	si:ch211-113e8.11	98	43.154	ENSORLG00000023699	si:ch211-113e8.11	96	40.249	Oryzias_latipes
ENSDARG00000076585	si:ch211-113e8.11	98	44.215	ENSORLG00020022094	si:ch211-113e8.11	96	42.797	Oryzias_latipes_hni
ENSDARG00000076585	si:ch211-113e8.11	98	46.245	ENSORLG00015002588	si:ch211-113e8.11	96	42.324	Oryzias_latipes_hsok
ENSDARG00000076585	si:ch211-113e8.11	97	47.500	ENSOMEG00000010624	si:ch211-113e8.11	95	46.639	Oryzias_melastigma
ENSDARG00000076585	si:ch211-113e8.11	96	43.404	ENSPKIG00000023576	si:ch211-113e8.11	92	44.105	Paramormyrops_kingsleyae
ENSDARG00000076585	si:ch211-113e8.11	99	45.643	ENSPMGG00000018547	si:ch211-113e8.11	99	45.106	Periophthalmus_magnuspinnatus
ENSDARG00000076585	si:ch211-113e8.11	97	51.477	ENSPFOG00000007950	si:ch211-113e8.11	97	49.789	Poecilia_formosa
ENSDARG00000076585	si:ch211-113e8.11	97	51.055	ENSPLAG00000002081	si:ch211-113e8.11	95	49.367	Poecilia_latipinna
ENSDARG00000076585	si:ch211-113e8.11	97	50.420	ENSPMEG00000017505	si:ch211-113e8.11	95	49.791	Poecilia_mexicana
ENSDARG00000076585	si:ch211-113e8.11	97	51.064	ENSPREG00000008530	si:ch211-113e8.11	95	49.785	Poecilia_reticulata
ENSDARG00000076585	si:ch211-113e8.11	97	50.000	ENSPNYG00000022856	si:ch211-113e8.11	95	48.276	Pundamilia_nyererei
ENSDARG00000076585	si:ch211-113e8.11	98	48.988	ENSPNAG00000013782	si:ch211-113e8.11	97	45.902	Pygocentrus_nattereri
ENSDARG00000076585	si:ch211-113e8.11	97	45.570	ENSSFOG00015000959	si:ch211-113e8.11	95	46.809	Scleropages_formosus
ENSDARG00000076585	si:ch211-113e8.11	98	45.600	ENSSMAG00000009732	si:ch211-113e8.11	95	44.980	Scophthalmus_maximus
ENSDARG00000076585	si:ch211-113e8.11	98	47.967	ENSSDUG00000000112	si:ch211-113e8.11	96	45.783	Seriola_dumerili
ENSDARG00000076585	si:ch211-113e8.11	98	47.967	ENSSLDG00000003287	si:ch211-113e8.11	96	45.382	Seriola_lalandi_dorsalis
ENSDARG00000076585	si:ch211-113e8.11	98	45.817	ENSSPAG00000001375	si:ch211-113e8.11	96	44.800	Stegastes_partitus
ENSDARG00000076585	si:ch211-113e8.11	97	48.739	ENSTRUG00000023898	si:ch211-113e8.11	95	47.436	Takifugu_rubripes
ENSDARG00000076585	si:ch211-113e8.11	97	50.209	ENSXMAG00000024104	si:ch211-113e8.11	95	47.280	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0046872	metal ion binding	-	IEA	Function