EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000076718 (Gene tree)
Gene ID: 557370
Gene Symbol: prkra
Alias: im:7151758|zgc:162619
Full Name: protein kinase%2C interferon-inducible double stranded RNA dependent activator
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 5773 bases
Position: chr9:1365747-1371519
Accession: ZDB-GENE-050309-206
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000036697	dsrm	PF00035.26	1.3e-27	1	2
ENSDARP00000036697	dsrm	PF00035.26	1.3e-27	2	2
ENSDARP00000115290	dsrm	PF00035.26	1.5e-27	1	2
ENSDARP00000115290	dsrm	PF00035.26	1.5e-27	2	2
ENSDARP00000115290	DND1_DSRM	PF14709.7	1.6e-10	1	1
ENSDARP00000036697	DND1_DSRM	PF14709.7	1.7e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000036605	-	1596	-	ENSDARP00000036697	282 (aa)	-	B0V3F8
ENSDART00000140917	-	934	XM_005172508	ENSDARP00000115290	289 (aa)	XP_005172565	F1Q8C8

Gene Model

Click here to download ENSDARG00000076718's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000076718's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000076718	prkra	96	42.540	ENSDARG00000070471	tarbp2	91	42.587

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000076718	prkra	97	50.865	ENSG00000180228	PRKRA	97	50.865	Homo_sapiens
ENSDARG00000076718	prkra	98	63.082	ENSAPOG00000019819	prkra	92	63.082	Acanthochromis_polyacanthus
ENSDARG00000076718	prkra	97	50.865	ENSAMEG00000000803	PRKRA	89	50.865	Ailuropoda_melanoleuca
ENSDARG00000076718	prkra	98	59.790	ENSACIG00000020131	prkra	96	61.765	Amphilophus_citrinellus
ENSDARG00000076718	prkra	98	60.364	ENSAOCG00000008651	prkra	98	60.364	Amphiprion_ocellaris
ENSDARG00000076718	prkra	98	63.082	ENSAPEG00000022769	prkra	95	61.672	Amphiprion_percula
ENSDARG00000076718	prkra	98	62.143	ENSATEG00000015036	prkra	93	61.189	Anabas_testudineus
ENSDARG00000076718	prkra	97	50.859	ENSACAG00000017232	PRKRA	80	50.859	Anolis_carolinensis
ENSDARG00000076718	prkra	97	50.519	ENSANAG00000019410	PRKRA	89	50.519	Aotus_nancymaae
ENSDARG00000076718	prkra	95	62.731	ENSACLG00000008370	prkra	90	62.731	Astatotilapia_calliptera
ENSDARG00000076718	prkra	97	66.667	ENSAMXG00000034602	prkra	92	66.667	Astyanax_mexicanus
ENSDARG00000076718	prkra	97	50.519	ENSBTAG00000001096	PRKRA	93	50.519	Bos_taurus
ENSDARG00000076718	prkra	97	50.519	ENSCJAG00000021521	PRKRA	89	50.519	Callithrix_jacchus
ENSDARG00000076718	prkra	97	50.519	ENSCAFG00000013850	PRKRA	89	50.519	Canis_familiaris
ENSDARG00000076718	prkra	97	50.519	ENSCHIG00000015333	PRKRA	89	50.519	Capra_hircus
ENSDARG00000076718	prkra	97	50.519	ENSTSYG00000009707	PRKRA	89	50.519	Carlito_syrichta
ENSDARG00000076718	prkra	80	41.921	ENSCAPG00000006602	PRKRA	77	43.716	Cavia_aperea
ENSDARG00000076718	prkra	97	50.519	ENSCPOG00000003900	-	89	50.519	Cavia_porcellus
ENSDARG00000076718	prkra	97	45.205	ENSCPOG00000008302	-	93	45.918	Cavia_porcellus
ENSDARG00000076718	prkra	97	50.519	ENSCCAG00000024400	PRKRA	89	50.519	Cebus_capucinus
ENSDARG00000076718	prkra	97	50.865	ENSCATG00000032736	PRKRA	89	50.865	Cercocebus_atys
ENSDARG00000076718	prkra	97	47.569	ENSCATG00000037246	-	93	47.569	Cercocebus_atys
ENSDARG00000076718	prkra	97	50.519	ENSCLAG00000010338	PRKRA	93	50.519	Chinchilla_lanigera
ENSDARG00000076718	prkra	97	49.135	ENSCSAG00000018878	-	90	49.135	Chlorocebus_sabaeus
ENSDARG00000076718	prkra	97	51.027	ENSCPBG00000021934	PRKRA	89	50.842	Chrysemys_picta_bellii
ENSDARG00000076718	prkra	97	50.865	ENSCANG00000034610	PRKRA	99	50.865	Colobus_angolensis_palliatus
ENSDARG00000076718	prkra	97	47.751	ENSCANG00000037988	-	97	47.751	Colobus_angolensis_palliatus
ENSDARG00000076718	prkra	97	50.694	ENSCGRG00001009200	Prkra	71	50.694	Cricetulus_griseus_chok1gshd
ENSDARG00000076718	prkra	97	50.694	ENSCGRG00000002863	Prkra	89	50.694	Cricetulus_griseus_crigri
ENSDARG00000076718	prkra	99	61.484	ENSCSEG00000002954	prkra	90	60.481	Cynoglossus_semilaevis
ENSDARG00000076718	prkra	99	62.057	ENSCVAG00000002749	prkra	94	61.754	Cyprinodon_variegatus
ENSDARG00000076718	prkra	97	50.173	ENSDNOG00000019701	PRKRA	89	50.173	Dasypus_novemcinctus
ENSDARG00000076718	prkra	97	49.653	ENSDORG00000013338	Prkra	89	49.653	Dipodomys_ordii
ENSDARG00000076718	prkra	59	46.784	ENSETEG00000010357	PRKRA	83	46.784	Echinops_telfairi
ENSDARG00000076718	prkra	97	50.519	ENSEASG00005022436	PRKRA	89	50.519	Equus_asinus_asinus
ENSDARG00000076718	prkra	97	50.519	ENSECAG00000024263	PRKRA	89	50.519	Equus_caballus
ENSDARG00000076718	prkra	97	44.444	ENSEEUG00000000476	PRKRA	89	43.403	Erinaceus_europaeus
ENSDARG00000076718	prkra	99	62.887	ENSELUG00000023321	prkra	94	62.887	Esox_lucius
ENSDARG00000076718	prkra	97	50.519	ENSFCAG00000031042	PRKRA	89	50.519	Felis_catus
ENSDARG00000076718	prkra	97	50.173	ENSFDAG00000012882	PRKRA	93	50.173	Fukomys_damarensis
ENSDARG00000076718	prkra	99	55.556	ENSGMOG00000004021	prkra	97	55.556	Gadus_morhua
ENSDARG00000076718	prkra	99	61.348	ENSGAFG00000004418	prkra	94	61.053	Gambusia_affinis
ENSDARG00000076718	prkra	99	58.703	ENSGACG00000004394	prkra	97	58.703	Gasterosteus_aculeatus
ENSDARG00000076718	prkra	97	51.178	ENSGAGG00000010791	PRKRA	89	50.842	Gopherus_agassizii
ENSDARG00000076718	prkra	97	50.865	ENSGGOG00000005754	PRKRA	89	50.865	Gorilla_gorilla
ENSDARG00000076718	prkra	95	62.731	ENSHBUG00000020169	prkra	90	62.731	Haplochromis_burtoni
ENSDARG00000076718	prkra	97	50.865	ENSHGLG00000010663	PRKRA	89	50.865	Heterocephalus_glaber_female
ENSDARG00000076718	prkra	97	42.561	ENSHGLG00000002194	-	88	42.561	Heterocephalus_glaber_female
ENSDARG00000076718	prkra	97	50.865	ENSHGLG00100013982	-	96	50.865	Heterocephalus_glaber_male
ENSDARG00000076718	prkra	97	42.561	ENSHGLG00100004391	-	88	42.561	Heterocephalus_glaber_male
ENSDARG00000076718	prkra	96	59.273	ENSHCOG00000000168	prkra	90	59.273	Hippocampus_comes
ENSDARG00000076718	prkra	97	65.217	ENSIPUG00000019396	prkra	99	62.887	Ictalurus_punctatus
ENSDARG00000076718	prkra	97	50.519	ENSSTOG00000006156	PRKRA	89	50.519	Ictidomys_tridecemlineatus
ENSDARG00000076718	prkra	97	50.173	ENSJJAG00000013031	Prkra	89	50.173	Jaculus_jaculus
ENSDARG00000076718	prkra	99	62.633	ENSKMAG00000016206	prkra	92	62.633	Kryptolebias_marmoratus
ENSDARG00000076718	prkra	99	59.794	ENSLBEG00000017208	prkra	90	61.818	Labrus_bergylta
ENSDARG00000076718	prkra	97	58.076	ENSLACG00000002855	PRKRA	90	58.076	Latimeria_chalumnae
ENSDARG00000076718	prkra	96	54.710	ENSLOCG00000006829	prkra	90	54.710	Lepisosteus_oculatus
ENSDARG00000076718	prkra	79	47.479	ENSLAFG00000026940	PRKRA	94	47.479	Loxodonta_africana
ENSDARG00000076718	prkra	97	50.865	ENSMFAG00000040213	PRKRA	89	50.865	Macaca_fascicularis
ENSDARG00000076718	prkra	97	50.865	ENSMMUG00000002185	PRKRA	93	50.865	Macaca_mulatta
ENSDARG00000076718	prkra	97	48.188	ENSMNEG00000030245	-	93	47.826	Macaca_nemestrina
ENSDARG00000076718	prkra	97	50.865	ENSMNEG00000031681	PRKRA	89	50.865	Macaca_nemestrina
ENSDARG00000076718	prkra	90	48.889	ENSMLEG00000031889	-	93	48.507	Mandrillus_leucophaeus
ENSDARG00000076718	prkra	97	50.865	ENSMLEG00000019578	PRKRA	97	50.865	Mandrillus_leucophaeus
ENSDARG00000076718	prkra	98	61.922	ENSMAMG00000006591	prkra	92	61.922	Mastacembelus_armatus
ENSDARG00000076718	prkra	80	58.079	ENSMZEG00005004467	prkra	79	58.079	Maylandia_zebra
ENSDARG00000076718	prkra	97	50.865	ENSMAUG00000019631	Prkra	89	50.865	Mesocricetus_auratus
ENSDARG00000076718	prkra	97	50.865	ENSMICG00000009883	PRKRA	89	50.865	Microcebus_murinus
ENSDARG00000076718	prkra	97	51.211	ENSMOCG00000004548	Prkra	89	51.211	Microtus_ochrogaster
ENSDARG00000076718	prkra	99	60.638	ENSMMOG00000000434	prkra	99	60.638	Mola_mola
ENSDARG00000076718	prkra	97	53.571	ENSMODG00000009823	PRKRA	89	53.571	Monodelphis_domestica
ENSDARG00000076718	prkra	99	60.137	ENSMALG00000010225	prkra	89	60.137	Monopterus_albus
ENSDARG00000076718	prkra	97	50.865	MGP_CAROLIEiJ_G0023688	Prkra	89	50.865	Mus_caroli
ENSDARG00000076718	prkra	97	50.865	ENSMUSG00000002731	Prkra	89	50.865	Mus_musculus
ENSDARG00000076718	prkra	97	50.865	MGP_PahariEiJ_G0025139	Prkra	89	50.865	Mus_pahari
ENSDARG00000076718	prkra	97	50.694	MGP_SPRETEiJ_G0024609	Prkra	89	50.694	Mus_spretus
ENSDARG00000076718	prkra	97	50.519	ENSMPUG00000003180	PRKRA	89	50.519	Mustela_putorius_furo
ENSDARG00000076718	prkra	97	46.182	ENSMLUG00000024042	-	97	46.545	Myotis_lucifugus
ENSDARG00000076718	prkra	97	50.173	ENSMLUG00000005810	-	90	50.173	Myotis_lucifugus
ENSDARG00000076718	prkra	97	50.865	ENSNGAG00000021816	Prkra	89	50.865	Nannospalax_galili
ENSDARG00000076718	prkra	95	62.731	ENSNBRG00000010819	prkra	90	62.731	Neolamprologus_brichardi
ENSDARG00000076718	prkra	97	50.865	ENSNLEG00000006120	-	97	50.865	Nomascus_leucogenys
ENSDARG00000076718	prkra	97	46.367	ENSMEUG00000002625	PRKRA	96	46.975	Notamacropus_eugenii
ENSDARG00000076718	prkra	80	49.383	ENSOPRG00000007575	PRKRA	60	52.821	Ochotona_princeps
ENSDARG00000076718	prkra	97	42.958	ENSODEG00000007930	-	93	42.958	Octodon_degus
ENSDARG00000076718	prkra	97	50.173	ENSODEG00000008743	-	89	50.173	Octodon_degus
ENSDARG00000076718	prkra	95	63.469	ENSONIG00000008579	prkra	96	63.469	Oreochromis_niloticus
ENSDARG00000076718	prkra	97	50.714	ENSOANG00000008630	-	89	50.714	Ornithorhynchus_anatinus
ENSDARG00000076718	prkra	97	49.827	ENSOCUG00000005489	PRKRA	89	49.827	Oryctolagus_cuniculus
ENSDARG00000076718	prkra	97	62.816	ENSORLG00000017598	prkra	90	62.816	Oryzias_latipes
ENSDARG00000076718	prkra	97	62.816	ENSORLG00020020348	prkra	90	62.816	Oryzias_latipes_hni
ENSDARG00000076718	prkra	97	61.232	ENSORLG00015014417	prkra	90	61.232	Oryzias_latipes_hsok
ENSDARG00000076718	prkra	96	62.143	ENSOMEG00000005162	prkra	89	62.143	Oryzias_melastigma
ENSDARG00000076718	prkra	97	50.519	ENSOGAG00000013971	PRKRA	89	50.519	Otolemur_garnettii
ENSDARG00000076718	prkra	97	50.519	ENSOARG00000017321	PRKRA	89	50.519	Ovis_aries
ENSDARG00000076718	prkra	79	47.479	ENSPPAG00000043306	PRKRA	88	47.479	Pan_paniscus
ENSDARG00000076718	prkra	97	50.519	ENSPPRG00000011982	-	89	50.519	Panthera_pardus
ENSDARG00000076718	prkra	97	50.519	ENSPTIG00000010369	PRKRA	97	50.519	Panthera_tigris_altaica
ENSDARG00000076718	prkra	97	50.865	ENSPTRG00000012688	PRKRA	89	50.865	Pan_troglodytes
ENSDARG00000076718	prkra	97	50.865	ENSPANG00000001046	PRKRA	89	50.865	Papio_anubis
ENSDARG00000076718	prkra	90	50.000	ENSPANG00000035264	-	90	49.627	Papio_anubis
ENSDARG00000076718	prkra	99	59.431	ENSPKIG00000022368	prkra	93	58.741	Paramormyrops_kingsleyae
ENSDARG00000076718	prkra	97	49.828	ENSPSIG00000002848	PRKRA	97	49.828	Pelodiscus_sinensis
ENSDARG00000076718	prkra	97	51.389	ENSPEMG00000011967	Prkra	89	51.389	Peromyscus_maniculatus_bairdii
ENSDARG00000076718	prkra	97	51.903	ENSPCIG00000025371	PRKRA	65	51.903	Phascolarctos_cinereus
ENSDARG00000076718	prkra	99	60.993	ENSPFOG00000015000	prkra	93	60.702	Poecilia_formosa
ENSDARG00000076718	prkra	99	60.993	ENSPLAG00000021726	prkra	94	60.702	Poecilia_latipinna
ENSDARG00000076718	prkra	99	62.057	ENSPMEG00000006172	prkra	93	61.754	Poecilia_mexicana
ENSDARG00000076718	prkra	99	61.702	ENSPREG00000005680	prkra	94	61.404	Poecilia_reticulata
ENSDARG00000076718	prkra	97	50.871	ENSPPYG00000012976	PRKRA	89	50.871	Pongo_abelii
ENSDARG00000076718	prkra	97	50.519	ENSPCOG00000018812	PRKRA	89	50.519	Propithecus_coquereli
ENSDARG00000076718	prkra	97	46.021	ENSPVAG00000017505	PRKRA	89	46.021	Pteropus_vampyrus
ENSDARG00000076718	prkra	95	62.362	ENSPNYG00000008795	prkra	90	62.362	Pundamilia_nyererei
ENSDARG00000076718	prkra	97	64.103	ENSPNAG00000021962	prkra	91	63.636	Pygocentrus_nattereri
ENSDARG00000076718	prkra	97	50.865	ENSRNOG00000011195	Prkra	89	50.865	Rattus_norvegicus
ENSDARG00000076718	prkra	97	50.709	ENSRBIG00000042015	-	93	50.709	Rhinopithecus_bieti
ENSDARG00000076718	prkra	97	50.865	ENSRBIG00000035301	PRKRA	89	50.865	Rhinopithecus_bieti
ENSDARG00000076718	prkra	97	50.865	ENSRROG00000035389	PRKRA	89	50.865	Rhinopithecus_roxellana
ENSDARG00000076718	prkra	97	50.519	ENSSBOG00000012105	PRKRA	89	50.519	Saimiri_boliviensis_boliviensis
ENSDARG00000076718	prkra	97	52.669	ENSSHAG00000009949	PRKRA	96	52.669	Sarcophilus_harrisii
ENSDARG00000076718	prkra	98	60.932	ENSSFOG00015002157	prkra	94	58.763	Scleropages_formosus
ENSDARG00000076718	prkra	96	61.538	ENSSMAG00000015615	prkra	81	61.538	Scophthalmus_maximus
ENSDARG00000076718	prkra	98	62.989	ENSSDUG00000000636	prkra	93	62.456	Seriola_dumerili
ENSDARG00000076718	prkra	96	60.294	ENSSLDG00000000652	prkra	86	60.294	Seriola_lalandi_dorsalis
ENSDARG00000076718	prkra	97	50.173	ENSSARG00000003080	PRKRA	89	50.173	Sorex_araneus
ENSDARG00000076718	prkra	96	52.837	ENSSPUG00000006140	PRKRA	80	52.837	Sphenodon_punctatus
ENSDARG00000076718	prkra	97	62.455	ENSSPAG00000021062	prkra	90	62.455	Stegastes_partitus
ENSDARG00000076718	prkra	97	50.519	ENSSSCG00000038254	PRKRA	89	50.519	Sus_scrofa
ENSDARG00000076718	prkra	99	59.441	ENSTRUG00000021336	prkra	95	59.310	Takifugu_rubripes
ENSDARG00000076718	prkra	97	62.319	ENSTNIG00000016963	prkra	90	62.319	Tetraodon_nigroviridis
ENSDARG00000076718	prkra	97	50.694	ENSTBEG00000006494	PRKRA	89	50.694	Tupaia_belangeri
ENSDARG00000076718	prkra	79	47.479	ENSTTRG00000009700	PRKRA	88	47.479	Tursiops_truncatus
ENSDARG00000076718	prkra	97	50.173	ENSUMAG00000016566	PRKRA	97	50.173	Ursus_maritimus
ENSDARG00000076718	prkra	97	47.038	ENSVPAG00000003485	PRKRA	96	47.038	Vicugna_pacos
ENSDARG00000076718	prkra	97	50.519	ENSVVUG00000010032	PRKRA	93	50.519	Vulpes_vulpes
ENSDARG00000076718	prkra	96	62.545	ENSXMAG00000027764	prkra	90	62.545	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	IEA	Function
GO:0003725	double-stranded RNA binding	-	IEA	Function
GO:0005737	cytoplasm	-	IEA	Component
GO:0005737	cytoplasm	-	ISS	Component
GO:0008047	enzyme activator activity	-	IEA	Function
GO:0016301	kinase activity	-	IEA	Function
GO:0016310	phosphorylation	-	IEA	Process
GO:0016740	transferase activity	-	IEA	Function
GO:0030422	production of siRNA involved in RNA interference	-	IEA	Process
GO:0030422	production of siRNA involved in RNA interference	-	ISS	Process
GO:0031047	gene silencing by RNA	-	IEA	Process
GO:0048471	perinuclear region of cytoplasm	-	IEA	Component