EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000076995 (Gene tree)
Gene ID: 793673
Gene Symbol: sharpin
Alias: sipl1
Full Name: SHANK-associated RH domain interacting protein
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 10416 bases
Position: chr2:354424-364839
Accession: ZDB-GENE-101223-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000128247	zf-RanBP	PF00641.18	3.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000155651	-	4149	XM_001333445	ENSDARP00000128247	394 (aa)	XP_001333481	X1WDE8

Gene Model

Click here to download ENSDARG00000076995's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre04217	Necroptosis	KEGG
dre04621	NOD-like receptor signaling pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000076995's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000076995	sharpin	95	53.846	ENSDARG00000059871	shrprbck1r	84	53.846

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000076995	sharpin	98	56.020	ENSAPOG00000023352	sharpin	91	56.020	Acanthochromis_polyacanthus
ENSDARG00000076995	sharpin	94	56.667	ENSAPOG00000022737	shrprbck1r	54	56.667	Acanthochromis_polyacanthus
ENSDARG00000076995	sharpin	94	56.477	ENSACIG00000002184	shrprbck1r	80	54.922	Amphilophus_citrinellus
ENSDARG00000076995	sharpin	94	55.897	ENSAOCG00000002890	shrprbck1r	55	55.897	Amphiprion_ocellaris
ENSDARG00000076995	sharpin	98	56.265	ENSAOCG00000017464	sharpin	91	56.265	Amphiprion_ocellaris
ENSDARG00000076995	sharpin	94	54.962	ENSAPEG00000023274	shrprbck1r	54	54.962	Amphiprion_percula
ENSDARG00000076995	sharpin	98	56.265	ENSAPEG00000004049	sharpin	91	56.265	Amphiprion_percula
ENSDARG00000076995	sharpin	96	56.818	ENSATEG00000007832	sharpin	81	56.818	Anabas_testudineus
ENSDARG00000076995	sharpin	94	54.103	ENSATEG00000014561	shrprbck1r	54	54.359	Anabas_testudineus
ENSDARG00000076995	sharpin	94	56.298	ENSACLG00000022609	shrprbck1r	55	56.041	Astatotilapia_calliptera
ENSDARG00000076995	sharpin	81	35.952	ENSACLG00000020160	-	83	35.952	Astatotilapia_calliptera
ENSDARG00000076995	sharpin	95	54.831	ENSAMXG00000021016	shrprbck1r	62	56.145	Astyanax_mexicanus
ENSDARG00000076995	sharpin	97	64.194	ENSAMXG00000006229	sharpin	99	64.194	Astyanax_mexicanus
ENSDARG00000076995	sharpin	94	52.850	ENSCSEG00000011306	shrprbck1r	54	53.109	Cynoglossus_semilaevis
ENSDARG00000076995	sharpin	98	53.827	ENSCVAG00000006586	sharpin	91	53.827	Cyprinodon_variegatus
ENSDARG00000076995	sharpin	97	52.913	ENSCVAG00000007250	shrprbck1r	58	52.913	Cyprinodon_variegatus
ENSDARG00000076995	sharpin	95	56.030	ENSELUG00000016022	shrprbck1r	55	56.030	Esox_lucius
ENSDARG00000076995	sharpin	98	54.321	ENSFHEG00000013564	sharpin	91	54.321	Fundulus_heteroclitus
ENSDARG00000076995	sharpin	79	63.043	ENSGMOG00000010123	sharpin	85	63.043	Gadus_morhua
ENSDARG00000076995	sharpin	94	42.708	ENSGAFG00000021405	sharpin	86	42.708	Gambusia_affinis
ENSDARG00000076995	sharpin	94	55.155	ENSGAFG00000009309	shrprbck1r	54	55.155	Gambusia_affinis
ENSDARG00000076995	sharpin	94	55.784	ENSHBUG00000021933	shrprbck1r	55	56.555	Haplochromis_burtoni
ENSDARG00000076995	sharpin	97	54.082	ENSHCOG00000018847	sharpin	77	53.865	Hippocampus_comes
ENSDARG00000076995	sharpin	79	83.333	ENSIPUG00000011951	sharpin	100	63.333	Ictalurus_punctatus
ENSDARG00000076995	sharpin	95	54.822	ENSIPUG00000014247	shrprbck1r	54	54.822	Ictalurus_punctatus
ENSDARG00000076995	sharpin	95	54.798	ENSKMAG00000015215	shrprbck1r	55	54.798	Kryptolebias_marmoratus
ENSDARG00000076995	sharpin	94	55.499	ENSKMAG00000015204	sharpin	80	46.850	Kryptolebias_marmoratus
ENSDARG00000076995	sharpin	94	55.243	ENSLBEG00000016876	shrprbck1r	55	55.754	Labrus_bergylta
ENSDARG00000076995	sharpin	100	54.479	ENSLBEG00000016624	sharpin	92	54.479	Labrus_bergylta
ENSDARG00000076995	sharpin	94	46.465	ENSLACG00000010948	-	57	46.465	Latimeria_chalumnae
ENSDARG00000076995	sharpin	97	54.808	ENSLOCG00000008910	shrprbck1r	58	54.808	Lepisosteus_oculatus
ENSDARG00000076995	sharpin	94	53.964	ENSMAMG00000022930	shrprbck1r	55	54.499	Mastacembelus_armatus
ENSDARG00000076995	sharpin	76	68.750	ENSMAMG00000014645	sharpin	79	68.750	Mastacembelus_armatus
ENSDARG00000076995	sharpin	94	56.298	ENSMZEG00005021257	shrprbck1r	55	56.041	Maylandia_zebra
ENSDARG00000076995	sharpin	94	55.584	ENSMMOG00000003764	shrprbck1r	54	55.584	Mola_mola
ENSDARG00000076995	sharpin	78	62.069	ENSMMOG00000016788	sharpin	81	62.069	Mola_mola
ENSDARG00000076995	sharpin	94	55.270	ENSMALG00000008861	shrprbck1r	55	55.270	Monopterus_albus
ENSDARG00000076995	sharpin	53	68.750	ENSMALG00000020528	sharpin	82	68.750	Monopterus_albus
ENSDARG00000076995	sharpin	81	45.963	ENSNBRG00000012382	sharpin	91	45.031	Neolamprologus_brichardi
ENSDARG00000076995	sharpin	94	56.041	ENSNBRG00000002270	shrprbck1r	55	55.784	Neolamprologus_brichardi
ENSDARG00000076995	sharpin	94	49.502	ENSONIG00000009626	-	98	47.755	Oreochromis_niloticus
ENSDARG00000076995	sharpin	94	56.477	ENSONIG00000014401	shrprbck1r	54	56.218	Oreochromis_niloticus
ENSDARG00000076995	sharpin	94	53.470	ENSORLG00000007392	shrprbck1r	55	53.470	Oryzias_latipes
ENSDARG00000076995	sharpin	98	53.528	ENSORLG00000017281	sharpin	91	53.528	Oryzias_latipes
ENSDARG00000076995	sharpin	98	53.285	ENSORLG00020000801	sharpin	91	53.285	Oryzias_latipes_hni
ENSDARG00000076995	sharpin	94	52.699	ENSORLG00020018619	shrprbck1r	55	52.699	Oryzias_latipes_hni
ENSDARG00000076995	sharpin	98	53.528	ENSORLG00015009860	sharpin	91	53.528	Oryzias_latipes_hsok
ENSDARG00000076995	sharpin	94	53.077	ENSORLG00015018865	shrprbck1r	55	53.077	Oryzias_latipes_hsok
ENSDARG00000076995	sharpin	79	76.923	ENSOMEG00000005729	sharpin	80	76.923	Oryzias_melastigma
ENSDARG00000076995	sharpin	94	54.359	ENSOMEG00000012749	shrprbck1r	55	54.359	Oryzias_melastigma
ENSDARG00000076995	sharpin	95	59.391	ENSPKIG00000006933	shrprbck1r	55	58.942	Paramormyrops_kingsleyae
ENSDARG00000076995	sharpin	94	55.471	ENSPKIG00000018308	-	81	55.980	Paramormyrops_kingsleyae
ENSDARG00000076995	sharpin	96	52.346	ENSPMGG00000013254	shrprbck1r	56	52.346	Periophthalmus_magnuspinnatus
ENSDARG00000076995	sharpin	51	73.077	ENSPMGG00000019318	sharpin	86	73.077	Periophthalmus_magnuspinnatus
ENSDARG00000076995	sharpin	98	54.791	ENSPFOG00000015253	sharpin	91	54.791	Poecilia_formosa
ENSDARG00000076995	sharpin	94	55.013	ENSPFOG00000004214	shrprbck1r	81	55.013	Poecilia_formosa
ENSDARG00000076995	sharpin	94	55.013	ENSPLAG00000020523	shrprbck1r	54	55.013	Poecilia_latipinna
ENSDARG00000076995	sharpin	98	54.545	ENSPLAG00000000423	sharpin	91	54.545	Poecilia_latipinna
ENSDARG00000076995	sharpin	94	41.689	ENSPMEG00000023030	sharpin	80	41.689	Poecilia_mexicana
ENSDARG00000076995	sharpin	94	54.359	ENSPMEG00000006877	shrprbck1r	54	54.359	Poecilia_mexicana
ENSDARG00000076995	sharpin	94	53.351	ENSPREG00000014689	shrprbck1r	54	53.351	Poecilia_reticulata
ENSDARG00000076995	sharpin	98	54.034	ENSPREG00000009702	sharpin	91	54.034	Poecilia_reticulata
ENSDARG00000076995	sharpin	94	56.555	ENSPNYG00000022601	shrprbck1r	55	56.298	Pundamilia_nyererei
ENSDARG00000076995	sharpin	94	59.318	ENSPNAG00000002911	sharpin	99	60.367	Pygocentrus_nattereri
ENSDARG00000076995	sharpin	94	54.568	ENSPNAG00000007847	shrprbck1r	56	54.034	Pygocentrus_nattereri
ENSDARG00000076995	sharpin	87	62.385	ENSSFOG00015004028	sharpin	84	48.712	Scleropages_formosus
ENSDARG00000076995	sharpin	94	56.000	ENSSMAG00000018085	shrprbck1r	55	56.250	Scophthalmus_maximus
ENSDARG00000076995	sharpin	94	55.897	ENSSDUG00000002959	shrprbck1r	54	55.897	Seriola_dumerili
ENSDARG00000076995	sharpin	96	41.221	ENSSDUG00000019039	sharpin	87	41.221	Seriola_dumerili
ENSDARG00000076995	sharpin	94	55.385	ENSSLDG00000009026	shrprbck1r	55	55.385	Seriola_lalandi_dorsalis
ENSDARG00000076995	sharpin	94	55.808	ENSSPAG00000016097	shrprbck1r	56	55.808	Stegastes_partitus
ENSDARG00000076995	sharpin	65	60.976	ENSSPAG00000021807	sharpin	89	60.976	Stegastes_partitus
ENSDARG00000076995	sharpin	94	50.000	ENSTRUG00000011046	sharpin	87	50.000	Takifugu_rubripes
ENSDARG00000076995	sharpin	94	53.846	ENSTRUG00000006949	shrprbck1r	53	53.846	Takifugu_rubripes
ENSDARG00000076995	sharpin	94	51.654	ENSTNIG00000008521	sharpin	94	51.654	Tetraodon_nigroviridis
ENSDARG00000076995	sharpin	95	41.985	ENSXCOG00000015019	sharpin	88	41.985	Xiphophorus_couchianus
ENSDARG00000076995	sharpin	94	51.813	ENSXCOG00000006701	shrprbck1r	53	51.813	Xiphophorus_couchianus
ENSDARG00000076995	sharpin	98	53.922	ENSXMAG00000022076	sharpin	91	53.922	Xiphophorus_maculatus
ENSDARG00000076995	sharpin	94	51.554	ENSXMAG00000018972	shrprbck1r	53	51.554	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0004842	ubiquitin-protein transferase activity	21873635.	IBA	Function
GO:0043123	positive regulation of I-kappaB kinase/NF-kappaB signaling	21873635.	IBA	Process
GO:0043130	ubiquitin binding	21873635.	IBA	Function
GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	21873635.	IBA	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:0048592	eye morphogenesis	20956555.	IMP	Process
GO:0048701	embryonic cranial skeleton morphogenesis	20956555.	IMP	Process
GO:0071600	otic vesicle morphogenesis	20956555.	IMP	Process
GO:0071797	LUBAC complex	21873635.	IBA	Component
GO:0097039	protein linear polyubiquitination	21873635.	IBA	Process