EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Gene Ontology

Description

Ensembl ID: ENSDARG00000077085 (Gene tree)
Gene ID: 503597
Gene Symbol: zgc:110821
Alias: -
Full Name: zgc:110821
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 10564 bases
Position: chr22:2648931-2659494
Accession: ZDB-GENE-050227-8
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000097135	zf-C2H2	PF00096.26	6.5e-34	1	6
ENSDARP00000097135	zf-C2H2	PF00096.26	6.5e-34	2	6
ENSDARP00000097135	zf-C2H2	PF00096.26	6.5e-34	3	6
ENSDARP00000097135	zf-C2H2	PF00096.26	6.5e-34	4	6
ENSDARP00000097135	zf-C2H2	PF00096.26	6.5e-34	5	6
ENSDARP00000097135	zf-C2H2	PF00096.26	6.5e-34	6	6
ENSDARP00000029802	zf-C2H2	PF00096.26	4.5e-15	1	3
ENSDARP00000029802	zf-C2H2	PF00096.26	4.5e-15	2	3
ENSDARP00000029802	zf-C2H2	PF00096.26	4.5e-15	3	3
ENSDARP00000097135	zf-met	PF12874.7	0.00024	1	2
ENSDARP00000097135	zf-met	PF12874.7	0.00024	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000034414	-	905	-	ENSDARP00000029802	125 (aa)	-	F1R9K4
ENSDART00000106357	-	1432	-	ENSDARP00000097135	279 (aa)	-	F1QVF4

Gene Model

Click here to download ENSDARG00000077085's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000077085's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000077085	zgc:110821	94	54.000	ENSDARG00000094343	si:dkey-20i20.8	80	59.055
ENSDARG00000077085	zgc:110821	100	63.846	ENSDARG00000078159	zgc:175284	100	61.765
ENSDARG00000077085	zgc:110821	98	59.375	ENSDARG00000102053	znf1164	100	60.177
ENSDARG00000077085	zgc:110821	72	49.153	ENSDARG00000092027	si:dkey-20i20.9	75	61.111
ENSDARG00000077085	zgc:110821	83	61.538	ENSDARG00000093672	zgc:171435	100	59.804
ENSDARG00000077085	zgc:110821	99	60.526	ENSDARG00000094736	znf1157	99	60.577
ENSDARG00000077085	zgc:110821	95	64.516	ENSDARG00000113666	znf1173	81	64.516
ENSDARG00000077085	zgc:110821	98	56.557	ENSDARG00000092088	si:dkey-4c15.8	99	60.606
ENSDARG00000077085	zgc:110821	92	62.393	ENSDARG00000101885	si:dkey-20i20.11	98	62.393
ENSDARG00000077085	zgc:110821	99	65.152	ENSDARG00000071833	znf1162	100	59.524
ENSDARG00000077085	zgc:110821	96	56.349	ENSDARG00000115326	znf1002	90	56.349
ENSDARG00000077085	zgc:110821	97	64.706	ENSDARG00000094309	si:ch73-92e7.6	100	61.719
ENSDARG00000077085	zgc:110821	96	58.580	ENSDARG00000101425	si:dkey-1b17.5	85	58.580
ENSDARG00000077085	zgc:110821	94	56.667	ENSDARG00000111899	zgc:171435	88	42.069
ENSDARG00000077085	zgc:110821	95	55.645	ENSDARG00000014775	zgc:113220	96	53.333
ENSDARG00000077085	zgc:110821	87	64.545	ENSDARG00000095397	znf1170	100	61.017
ENSDARG00000077085	zgc:110821	100	56.667	ENSDARG00000112141	znf1169	84	43.448
ENSDARG00000077085	zgc:110821	98	64.062	ENSDARG00000093562	si:dkey-20i20.7	86	57.600
ENSDARG00000077085	zgc:110821	92	58.120	ENSDARG00000095455	si:dkey-20i20.10	95	55.556
ENSDARG00000077085	zgc:110821	99	62.609	ENSDARG00000099618	si:dkey-1b17.6	89	61.194
ENSDARG00000077085	zgc:110821	96	63.200	ENSDARG00000095704	si:dkey-4c15.13	100	60.305
ENSDARG00000077085	zgc:110821	96	49.600	ENSDARG00000098898	si:ch211-255f4.2	95	48.092
ENSDARG00000077085	zgc:110821	93	70.248	ENSDARG00000093875	zgc:174224	76	65.354
ENSDARG00000077085	zgc:110821	92	60.345	ENSDARG00000092246	si:dkey-20i20.3	71	57.600
ENSDARG00000077085	zgc:110821	96	55.118	ENSDARG00000100544	zgc:173486	100	51.111
ENSDARG00000077085	zgc:110821	98	60.684	ENSDARG00000071714	znf983	98	57.937

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0046872	metal ion binding	-	IEA	Function