EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000077169 (Gene tree)
Gene ID: 335392
Gene Symbol: si:ch211-153b23.4
Alias: fj08f03|fj10b02|im:7041150|wu:fj08f03|wu:fj10b02
Full Name: si:ch211-153b23.4
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 6227 bases
Position: chr14:11450498-11456724
Accession: ZDB-GENE-030131-7332
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000097499	Sua5_yciO_yrdC	PF01300.18	9.3e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000110424	-	3128	-	ENSDARP00000097499	876 (aa)	-	F1QWR2

Gene Model

Click here to download ENSDARG00000077169's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000077169's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000077169	si:ch211-153b23.4	93	67.482	ENSAPOG00000006144	si:ch211-153b23.4	95	67.482	Acanthochromis_polyacanthus
ENSDARG00000077169	si:ch211-153b23.4	98	65.313	ENSAPOG00000006178	si:ch211-153b23.4	98	65.313	Acanthochromis_polyacanthus
ENSDARG00000077169	si:ch211-153b23.4	96	68.949	ENSACIG00000006997	si:ch211-153b23.4	98	68.949	Amphilophus_citrinellus
ENSDARG00000077169	si:ch211-153b23.4	85	43.452	ENSACIG00000006968	si:ch211-153b23.3	97	43.452	Amphilophus_citrinellus
ENSDARG00000077169	si:ch211-153b23.4	89	67.217	ENSAOCG00000010999	si:ch211-153b23.4	95	67.217	Amphiprion_ocellaris
ENSDARG00000077169	si:ch211-153b23.4	94	66.104	ENSAPEG00000014665	si:ch211-153b23.4	97	66.104	Amphiprion_percula
ENSDARG00000077169	si:ch211-153b23.4	99	68.506	ENSATEG00000004948	si:ch211-153b23.4	99	68.506	Anabas_testudineus
ENSDARG00000077169	si:ch211-153b23.4	93	59.074	ENSAPLG00000013596	-	99	59.074	Anas_platyrhynchos
ENSDARG00000077169	si:ch211-153b23.4	99	68.894	ENSACLG00000005471	si:ch211-153b23.4	98	68.894	Astatotilapia_calliptera
ENSDARG00000077169	si:ch211-153b23.4	97	74.736	ENSAMXG00000013879	si:ch211-153b23.4	100	74.707	Astyanax_mexicanus
ENSDARG00000077169	si:ch211-153b23.4	96	67.887	ENSCSEG00000014838	si:ch211-153b23.4	99	67.887	Cynoglossus_semilaevis
ENSDARG00000077169	si:ch211-153b23.4	92	69.420	ENSCVAG00000021145	si:ch211-153b23.4	100	69.420	Cyprinodon_variegatus
ENSDARG00000077169	si:ch211-153b23.4	58	31.992	ENSCVAG00000021124	si:ch211-153b23.3	58	31.992	Cyprinodon_variegatus
ENSDARG00000077169	si:ch211-153b23.4	95	68.705	ENSELUG00000004961	si:ch211-153b23.4	93	68.705	Esox_lucius
ENSDARG00000077169	si:ch211-153b23.4	99	53.103	ENSFALG00000011343	-	99	53.103	Ficedula_albicollis
ENSDARG00000077169	si:ch211-153b23.4	59	31.698	ENSFHEG00000010030	si:ch211-153b23.3	58	31.698	Fundulus_heteroclitus
ENSDARG00000077169	si:ch211-153b23.4	85	69.262	ENSFHEG00000009888	si:ch211-153b23.4	83	69.262	Fundulus_heteroclitus
ENSDARG00000077169	si:ch211-153b23.4	91	69.825	ENSFHEG00000010001	si:ch211-153b23.4	99	69.825	Fundulus_heteroclitus
ENSDARG00000077169	si:ch211-153b23.4	88	67.139	ENSGAFG00000007442	si:ch211-153b23.4	93	68.041	Gambusia_affinis
ENSDARG00000077169	si:ch211-153b23.4	96	68.831	ENSGACG00000018253	si:ch211-153b23.4	99	68.831	Gasterosteus_aculeatus
ENSDARG00000077169	si:ch211-153b23.4	84	58.839	ENSGAGG00000024601	-	99	58.839	Gopherus_agassizii
ENSDARG00000077169	si:ch211-153b23.4	59	33.585	ENSHBUG00000001760	si:ch211-153b23.3	59	33.771	Haplochromis_burtoni
ENSDARG00000077169	si:ch211-153b23.4	76	70.536	ENSHBUG00000000013	si:ch211-153b23.4	89	70.536	Haplochromis_burtoni
ENSDARG00000077169	si:ch211-153b23.4	95	74.910	ENSIPUG00000015205	si:ch211-153b23.4	99	74.910	Ictalurus_punctatus
ENSDARG00000077169	si:ch211-153b23.4	93	69.890	ENSKMAG00000006829	si:ch211-153b23.4	100	69.890	Kryptolebias_marmoratus
ENSDARG00000077169	si:ch211-153b23.4	99	67.237	ENSKMAG00000006919	-	99	67.237	Kryptolebias_marmoratus
ENSDARG00000077169	si:ch211-153b23.4	59	32.514	ENSLBEG00000026324	si:ch211-153b23.3	58	32.514	Labrus_bergylta
ENSDARG00000077169	si:ch211-153b23.4	99	68.607	ENSLBEG00000026309	si:ch211-153b23.4	100	68.607	Labrus_bergylta
ENSDARG00000077169	si:ch211-153b23.4	93	62.136	ENSLACG00000017592	si:ch211-153b23.4	98	62.409	Latimeria_chalumnae
ENSDARG00000077169	si:ch211-153b23.4	93	71.184	ENSMAMG00000009358	si:ch211-153b23.4	99	71.184	Mastacembelus_armatus
ENSDARG00000077169	si:ch211-153b23.4	93	70.889	ENSMAMG00000009277	si:ch211-153b23.4	99	70.889	Mastacembelus_armatus
ENSDARG00000077169	si:ch211-153b23.4	59	31.429	ENSMAMG00000009328	si:ch211-153b23.3	58	31.369	Mastacembelus_armatus
ENSDARG00000077169	si:ch211-153b23.4	93	70.352	ENSMZEG00005011433	si:ch211-153b23.4	100	70.352	Maylandia_zebra
ENSDARG00000077169	si:ch211-153b23.4	93	59.512	ENSMGAG00000005478	-	99	59.512	Meleagris_gallopavo
ENSDARG00000077169	si:ch211-153b23.4	92	70.421	ENSMMOG00000004425	si:ch211-153b23.4	100	70.421	Mola_mola
ENSDARG00000077169	si:ch211-153b23.4	59	33.396	ENSNBRG00000013370	si:ch211-153b23.3	59	33.583	Neolamprologus_brichardi
ENSDARG00000077169	si:ch211-153b23.4	91	71.214	ENSNBRG00000013392	si:ch211-153b23.4	100	71.214	Neolamprologus_brichardi
ENSDARG00000077169	si:ch211-153b23.4	99	68.772	ENSONIG00000017875	si:ch211-153b23.4	99	68.772	Oreochromis_niloticus
ENSDARG00000077169	si:ch211-153b23.4	99	65.868	ENSORLG00000006169	si:ch211-153b23.4	99	65.868	Oryzias_latipes
ENSDARG00000077169	si:ch211-153b23.4	99	65.753	ENSORLG00020009905	si:ch211-153b23.4	99	65.753	Oryzias_latipes_hni
ENSDARG00000077169	si:ch211-153b23.4	99	65.870	ENSORLG00015003709	si:ch211-153b23.4	99	65.870	Oryzias_latipes_hsok
ENSDARG00000077169	si:ch211-153b23.4	96	67.692	ENSOMEG00000007682	si:ch211-153b23.4	99	66.135	Oryzias_melastigma
ENSDARG00000077169	si:ch211-153b23.4	96	67.967	ENSPKIG00000025681	si:ch211-153b23.4	98	67.967	Paramormyrops_kingsleyae
ENSDARG00000077169	si:ch211-153b23.4	95	66.148	ENSPKIG00000014429	si:ch211-153b23.4	96	66.148	Paramormyrops_kingsleyae
ENSDARG00000077169	si:ch211-153b23.4	95	55.660	ENSPMGG00000001313	si:ch211-153b23.4	94	55.778	Periophthalmus_magnuspinnatus
ENSDARG00000077169	si:ch211-153b23.4	80	69.701	ENSPFOG00000012164	si:ch211-153b23.4	99	69.701	Poecilia_formosa
ENSDARG00000077169	si:ch211-153b23.4	92	68.820	ENSPLAG00000016295	si:ch211-153b23.4	100	68.820	Poecilia_latipinna
ENSDARG00000077169	si:ch211-153b23.4	90	68.222	ENSPMEG00000007538	si:ch211-153b23.4	96	68.222	Poecilia_mexicana
ENSDARG00000077169	si:ch211-153b23.4	59	33.585	ENSPNYG00000000251	si:ch211-153b23.3	59	33.771	Pundamilia_nyererei
ENSDARG00000077169	si:ch211-153b23.4	93	70.109	ENSPNYG00000000250	si:ch211-153b23.4	100	70.109	Pundamilia_nyererei
ENSDARG00000077169	si:ch211-153b23.4	99	74.659	ENSPNAG00000019554	si:ch211-153b23.4	99	74.659	Pygocentrus_nattereri
ENSDARG00000077169	si:ch211-153b23.4	98	65.753	ENSSFOG00015003920	-	99	65.753	Scleropages_formosus
ENSDARG00000077169	si:ch211-153b23.4	99	68.565	ENSSFOG00015010891	si:ch211-153b23.4	99	68.565	Scleropages_formosus
ENSDARG00000077169	si:ch211-153b23.4	98	68.641	ENSSMAG00000010067	si:ch211-153b23.4	99	68.641	Scophthalmus_maximus
ENSDARG00000077169	si:ch211-153b23.4	92	69.790	ENSSDUG00000006671	si:ch211-153b23.4	100	69.790	Seriola_dumerili
ENSDARG00000077169	si:ch211-153b23.4	76	67.013	ENSSDUG00000006931	si:ch211-153b23.4	92	67.013	Seriola_dumerili
ENSDARG00000077169	si:ch211-153b23.4	81	71.626	ENSSDUG00000006842	si:ch211-153b23.4	97	49.519	Seriola_dumerili
ENSDARG00000077169	si:ch211-153b23.4	93	59.096	ENSTGUG00000005499	-	99	59.096	Taeniopygia_guttata
ENSDARG00000077169	si:ch211-153b23.4	92	69.420	ENSTRUG00000003247	si:ch211-153b23.4	100	69.420	Takifugu_rubripes
ENSDARG00000077169	si:ch211-153b23.4	94	68.193	ENSTNIG00000008958	si:ch211-153b23.4	99	68.275	Tetraodon_nigroviridis
ENSDARG00000077169	si:ch211-153b23.4	96	55.429	ENSXETG00000004489	-	95	55.429	Xenopus_tropicalis
ENSDARG00000077169	si:ch211-153b23.4	95	69.065	ENSXMAG00000021388	si:ch211-153b23.4	99	69.065	Xiphophorus_maculatus
ENSDARG00000077169	si:ch211-153b23.4	96	67.019	ENSXMAG00000009416	-	100	67.019	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000049	tRNA binding	21873635.	IBA	Function
GO:0003725	double-stranded RNA binding	-	IEA	Function
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0006450	regulation of translational fidelity	21873635.	IBA	Process
GO:0016020	membrane	-	IEA	Component
GO:0016021	integral component of membrane	-	IEA	Component
GO:0016779	nucleotidyltransferase activity	21873635.	IBA	Function