EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSDARG00000077226 (Gene tree)
Gene ID
353295
Gene Symbol
smarca4a
Alias
brahma-related gene 1|brg1|smarca2|smarca4|wu:fb51a08|yng|young
Full Name
SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 4a
Gene Type
protein_coding
Species
Danio_rerio
Status
putative
Strand
Plus strand
Length
36722 bases
Position
chr3:19245804-19282525
Accession
ZDB-GENE-030605-1
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSDARP00000120295ResIIIPF04851.154.6e-0911
ENSDARP00000143385ResIIIPF04851.154.6e-0911
ENSDARP00000120295BRKPF07533.161.3e-1611
ENSDARP00000143385BRKPF07533.161.3e-1611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSDART00000134514-5680XM_021469728ENSDARP000001202951627 (aa)XP_021325403Q7ZSY3
ENSDART00000174668-6220-ENSDARP000001433851627 (aa)-Q7ZSY3
Gene Model
Click here to download ENSDARG00000077226's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000077226's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSDARG00000077226smarca4a10072.185ENSDARG00000008904smarca29472.933
ENSDARG00000077226smarca4a9285.667ENSDARG00000104339SMARCA49485.781
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSDARG00000077226smarca4a10087.401ENSG00000127616SMARCA49994.524Homo_sapiens
ENSDARG00000077226smarca4a9585.741ENSAPOG00000004542SMARCA49985.218Acanthochromis_polyacanthus
ENSDARG00000077226smarca4a7490.262ENSAPOG00000003509smarca4a9689.024Acanthochromis_polyacanthus
ENSDARG00000077226smarca4a10083.294ENSAMEG00000010868SMARCA410083.294Ailuropoda_melanoleuca
ENSDARG00000077226smarca4a9791.280ENSACIG00000021550smarca4a9791.103Amphilophus_citrinellus
ENSDARG00000077226smarca4a9585.567ENSACIG00000003035-9785.576Amphilophus_citrinellus
ENSDARG00000077226smarca4a9087.423ENSAOCG00000019167smarca4a10087.773Amphiprion_ocellaris
ENSDARG00000077226smarca4a9487.143ENSAOCG00000009450-9787.241Amphiprion_ocellaris
ENSDARG00000077226smarca4a10084.748ENSAPEG00000023108-9783.845Amphiprion_percula
ENSDARG00000077226smarca4a9087.491ENSAPEG00000015559smarca4a10087.842Amphiprion_percula
ENSDARG00000077226smarca4a10089.994ENSATEG00000011524smarca4a10089.512Anabas_testudineus
ENSDARG00000077226smarca4a9986.028ENSATEG00000001094-9686.774Anabas_testudineus
ENSDARG00000077226smarca4a9887.664ENSANAG00000036991SMARCA410084.109Aotus_nancymaae
ENSDARG00000077226smarca4a9586.532ENSACLG00000008638-9886.658Astatotilapia_calliptera
ENSDARG00000077226smarca4a9789.266ENSACLG00000000163smarca4a9789.781Astatotilapia_calliptera
ENSDARG00000077226smarca4a9488.694ENSAMXG00000011238-9588.299Astyanax_mexicanus
ENSDARG00000077226smarca4a9887.626ENSAMXG00000021023smarca4a9988.379Astyanax_mexicanus
ENSDARG00000077226smarca4a10087.485ENSBTAG00000019220SMARCA410087.241Bos_taurus
ENSDARG00000077226smarca4a10083.909ENSCJAG00000005936SMARCA410083.382Callithrix_jacchus
ENSDARG00000077226smarca4a10087.226ENSCAFG00000017584SMARCA410087.044Canis_familiaris
ENSDARG00000077226smarca4a10086.199ENSCAFG00020024620SMARCA49987.044Canis_lupus_dingo
ENSDARG00000077226smarca4a10083.394ENSCHIG00000015318SMARCA410083.537Capra_hircus
ENSDARG00000077226smarca4a10087.118ENSTSYG00000012966SMARCA410087.118Carlito_syrichta
ENSDARG00000077226smarca4a9481.741ENSCAPG00000015932SMARCA49590.530Cavia_aperea
ENSDARG00000077226smarca4a10087.470ENSCPOG00000015549SMARCA410086.983Cavia_porcellus
ENSDARG00000077226smarca4a10083.363ENSCCAG00000031660SMARCA49984.010Cebus_capucinus
ENSDARG00000077226smarca4a10087.348ENSCATG00000029530SMARCA410087.226Cercocebus_atys
ENSDARG00000077226smarca4a10087.264ENSCLAG00000011946SMARCA410087.355Chinchilla_lanigera
ENSDARG00000077226smarca4a10088.063ENSCPBG00000009994SMARCA410087.698Chrysemys_picta_bellii
ENSDARG00000077226smarca4a10087.287ENSCANG00000036013SMARCA410087.226Colobus_angolensis_palliatus
ENSDARG00000077226smarca4a10087.348ENSCGRG00001016732Smarca410087.105Cricetulus_griseus_chok1gshd
ENSDARG00000077226smarca4a10087.348ENSCGRG00000017242Smarca410087.105Cricetulus_griseus_crigri
ENSDARG00000077226smarca4a9688.600ENSCSEG00000014771smarca4a10089.004Cynoglossus_semilaevis
ENSDARG00000077226smarca4a9789.655ENSCVAG00000006979smarca4a9889.606Cyprinodon_variegatus
ENSDARG00000077226smarca4a9983.560ENSCVAG00000003018-9785.178Cyprinodon_variegatus
ENSDARG00000077226smarca4a10078.114ENSDNOG00000048847SMARCA49091.215Dasypus_novemcinctus
ENSDARG00000077226smarca4a8581.980ENSDORG00000002544Smarca49281.766Dipodomys_ordii
ENSDARG00000077226smarca4a9477.050ENSETEG00000013361SMARCA49476.737Echinops_telfairi
ENSDARG00000077226smarca4a10087.348ENSEASG00005006167SMARCA410085.170Equus_asinus_asinus
ENSDARG00000077226smarca4a10087.409ENSECAG00000008334SMARCA410087.044Equus_caballus
ENSDARG00000077226smarca4a10090.000ENSELUG00000010247smarca4a10089.333Esox_lucius
ENSDARG00000077226smarca4a9979.167ENSELUG00000023232-9878.213Esox_lucius
ENSDARG00000077226smarca4a10087.250ENSFCAG00000004894SMARCA410087.007Felis_catus
ENSDARG00000077226smarca4a9184.115ENSFALG00000004208SMARCA49285.034Ficedula_albicollis
ENSDARG00000077226smarca4a9287.923ENSFDAG00000012237SMARCA49787.658Fukomys_damarensis
ENSDARG00000077226smarca4a10085.194ENSFHEG00000007902-9985.321Fundulus_heteroclitus
ENSDARG00000077226smarca4a9688.449ENSFHEG00000010182smarca4a10088.310Fundulus_heteroclitus
ENSDARG00000077226smarca4a9381.803ENSGMOG00000005756-8981.119Gadus_morhua
ENSDARG00000077226smarca4a8889.831ENSGMOG00000002649smarca4a9486.350Gadus_morhua
ENSDARG00000077226smarca4a7387.552ENSGALG00000047145SMARCA410087.137Gallus_gallus
ENSDARG00000077226smarca4a9981.312ENSGAFG00000008827-9782.622Gambusia_affinis
ENSDARG00000077226smarca4a8889.648ENSGAFG00000014900smarca4a9790.117Gambusia_affinis
ENSDARG00000077226smarca4a9888.840ENSGACG00000006691smarca4a10088.436Gasterosteus_aculeatus
ENSDARG00000077226smarca4a9980.981ENSGACG00000016033-9780.823Gasterosteus_aculeatus
ENSDARG00000077226smarca4a10088.286ENSGAGG00000016757SMARCA410087.919Gopherus_agassizii
ENSDARG00000077226smarca4a10087.348ENSGGOG00000009882SMARCA410087.226Gorilla_gorilla
ENSDARG00000077226smarca4a10086.033ENSHBUG00000005447-9787.037Haplochromis_burtoni
ENSDARG00000077226smarca4a10089.731ENSHBUG00000021172smarca4a10090.006Haplochromis_burtoni
ENSDARG00000077226smarca4a10086.978ENSHGLG00000010519SMARCA410086.735Heterocephalus_glaber_female
ENSDARG00000077226smarca4a10086.817ENSHGLG00100013774SMARCA410086.270Heterocephalus_glaber_male
ENSDARG00000077226smarca4a9590.302ENSHCOG00000009510smarca4a9690.302Hippocampus_comes
ENSDARG00000077226smarca4a10092.778ENSIPUG00000006107smarca4a10093.558Ictalurus_punctatus
ENSDARG00000077226smarca4a9885.875ENSIPUG00000016346-9785.409Ictalurus_punctatus
ENSDARG00000077226smarca4a10087.226ENSSTOG00000007939SMARCA410086.922Ictidomys_tridecemlineatus
ENSDARG00000077226smarca4a10084.830ENSJJAG00000012877Smarca410084.675Jaculus_jaculus
ENSDARG00000077226smarca4a10088.379ENSKMAG00000011931smarca4a10089.188Kryptolebias_marmoratus
ENSDARG00000077226smarca4a10084.735ENSKMAG00000019518-9886.611Kryptolebias_marmoratus
ENSDARG00000077226smarca4a9587.476ENSLBEG00000017383smarca4a9787.275Labrus_bergylta
ENSDARG00000077226smarca4a9582.636ENSLBEG00000020655-9981.241Labrus_bergylta
ENSDARG00000077226smarca4a5281.170ENSLACG00000015309SMARCA410081.520Latimeria_chalumnae
ENSDARG00000077226smarca4a10087.217ENSLOCG00000007820smarca4a9986.789Lepisosteus_oculatus
ENSDARG00000077226smarca4a10087.189ENSLAFG00000001433SMARCA410086.946Loxodonta_africana
ENSDARG00000077226smarca4a10086.562ENSMFAG00000032146SMARCA49987.226Macaca_fascicularis
ENSDARG00000077226smarca4a10087.348ENSMMUG00000012042SMARCA410087.226Macaca_mulatta
ENSDARG00000077226smarca4a10087.454ENSMNEG00000028512SMARCA410087.272Macaca_nemestrina
ENSDARG00000077226smarca4a10087.128ENSMLEG00000034976SMARCA410087.007Mandrillus_leucophaeus
ENSDARG00000077226smarca4a9984.876ENSMAMG00000002841-9887.637Mastacembelus_armatus
ENSDARG00000077226smarca4a10090.104ENSMAMG00000009256smarca4a10090.409Mastacembelus_armatus
ENSDARG00000077226smarca4a9587.136ENSMZEG00005023861-9887.389Maylandia_zebra
ENSDARG00000077226smarca4a10089.615ENSMZEG00005003889smarca4a10089.890Maylandia_zebra
ENSDARG00000077226smarca4a10087.250ENSMAUG00000020731Smarca410086.825Mesocricetus_auratus
ENSDARG00000077226smarca4a10087.189ENSMICG00000009806SMARCA410086.946Microcebus_murinus
ENSDARG00000077226smarca4a10086.946ENSMOCG00000022209Smarca410086.703Microtus_ochrogaster
ENSDARG00000077226smarca4a9982.273ENSMMOG00000008466-9782.434Mola_mola
ENSDARG00000077226smarca4a9588.867ENSMMOG00000007571smarca4a9888.796Mola_mola
ENSDARG00000077226smarca4a10086.611ENSMODG00000006287SMARCA410085.595Monodelphis_domestica
ENSDARG00000077226smarca4a9689.627ENSMALG00000003388smarca4a10089.872Monopterus_albus
ENSDARG00000077226smarca4a10087.158MGP_CAROLIEiJ_G0031879Smarca410086.919Mus_caroli
ENSDARG00000077226smarca4a10087.158ENSMUSG00000032187Smarca410086.914Mus_musculus
ENSDARG00000077226smarca4a10087.538MGP_PahariEiJ_G0014745Smarca410087.411Mus_pahari
ENSDARG00000077226smarca4a10087.158MGP_SPRETEiJ_G0033003Smarca410086.919Mus_spretus
ENSDARG00000077226smarca4a10087.226ENSMPUG00000005711SMARCA410086.983Mustela_putorius_furo
ENSDARG00000077226smarca4a10087.015ENSMLUG00000004491-10087.044Myotis_lucifugus
ENSDARG00000077226smarca4a10087.439ENSNGAG00000021852Smarca410086.951Nannospalax_galili
ENSDARG00000077226smarca4a8983.071ENSNBRG00000018865-9984.820Neolamprologus_brichardi
ENSDARG00000077226smarca4a9587.444ENSNBRG00000011457smarca4a9687.701Neolamprologus_brichardi
ENSDARG00000077226smarca4a9584.415ENSNLEG00000012389SMARCA49485.311Nomascus_leucogenys
ENSDARG00000077226smarca4a8093.103ENSOPRG00000000885-7893.103Ochotona_princeps
ENSDARG00000077226smarca4a10085.136ENSODEG00000017127SMARCA410084.485Octodon_degus
ENSDARG00000077226smarca4a10089.731ENSONIG00000008196smarca4a10089.823Oreochromis_niloticus
ENSDARG00000077226smarca4a10086.153ENSONIG00000018040-9887.160Oreochromis_niloticus
ENSDARG00000077226smarca4a9881.864ENSOCUG00000001787SMARCA49881.801Oryctolagus_cuniculus
ENSDARG00000077226smarca4a9585.262ENSORLG00000003955-9785.119Oryzias_latipes
ENSDARG00000077226smarca4a10088.760ENSORLG00000015452smarca4a10088.760Oryzias_latipes
ENSDARG00000077226smarca4a10088.393ENSORLG00020004611smarca4a10088.760Oryzias_latipes_hni
ENSDARG00000077226smarca4a9585.209ENSORLG00020009728-9784.761Oryzias_latipes_hni
ENSDARG00000077226smarca4a9984.887ENSORLG00015007739-9784.498Oryzias_latipes_hsok
ENSDARG00000077226smarca4a10088.332ENSORLG00015016560smarca4a10088.699Oryzias_latipes_hsok
ENSDARG00000077226smarca4a9685.028ENSOMEG00000016626-9784.988Oryzias_melastigma
ENSDARG00000077226smarca4a10089.168ENSOMEG00000007486smarca4a10089.412Oryzias_melastigma
ENSDARG00000077226smarca4a8986.490ENSOGAG00000016148SMARCA410086.490Otolemur_garnettii
ENSDARG00000077226smarca4a10086.927ENSOARG00000017454SMARCA410086.744Ovis_aries
ENSDARG00000077226smarca4a10087.348ENSPPAG00000043191SMARCA410087.226Pan_paniscus
ENSDARG00000077226smarca4a10087.250ENSPPRG00000000064SMARCA410087.007Panthera_pardus
ENSDARG00000077226smarca4a7985.843ENSPTIG00000017447SMARCA410080.678Panthera_tigris_altaica
ENSDARG00000077226smarca4a10087.348ENSPTRG00000010488SMARCA410087.226Pan_troglodytes
ENSDARG00000077226smarca4a10086.788ENSPANG00000011042SMARCA49987.333Papio_anubis
ENSDARG00000077226smarca4a10087.271ENSPKIG00000010087-9787.097Paramormyrops_kingsleyae
ENSDARG00000077226smarca4a10090.881ENSPKIG00000007770SMARCA410091.004Paramormyrops_kingsleyae
ENSDARG00000077226smarca4a10082.388ENSPSIG00000005547SMARCA410081.970Pelodiscus_sinensis
ENSDARG00000077226smarca4a10087.007ENSPEMG00000020389Smarca410086.764Peromyscus_maniculatus_bairdii
ENSDARG00000077226smarca4a10088.239ENSPCIG00000017138SMARCA410087.751Phascolarctos_cinereus
ENSDARG00000077226smarca4a10083.929ENSPFOG00000012930-9985.210Poecilia_formosa
ENSDARG00000077226smarca4a10087.690ENSPFOG00000007892smarca4a10087.932Poecilia_formosa
ENSDARG00000077226smarca4a10087.811ENSPLAG00000014294smarca4a10088.053Poecilia_latipinna
ENSDARG00000077226smarca4a9982.492ENSPLAG00000018616-9786.546Poecilia_latipinna
ENSDARG00000077226smarca4a9588.712ENSPMEG00000003725smarca4a9689.017Poecilia_mexicana
ENSDARG00000077226smarca4a9585.696ENSPMEG00000008929-9686.113Poecilia_mexicana
ENSDARG00000077226smarca4a9784.862ENSPREG00000014608smarca4a10087.659Poecilia_reticulata
ENSDARG00000077226smarca4a9585.741ENSPREG00000014823-9685.750Poecilia_reticulata
ENSDARG00000077226smarca4a10085.569ENSPPYG00000009568SMARCA410084.973Pongo_abelii
ENSDARG00000077226smarca4a7884.848ENSPCAG00000014054SMARCA47586.260Procavia_capensis
ENSDARG00000077226smarca4a10087.226ENSPCOG00000023011SMARCA410087.067Propithecus_coquereli
ENSDARG00000077226smarca4a9682.585ENSPVAG00000007787SMARCA49682.765Pteropus_vampyrus
ENSDARG00000077226smarca4a9590.599ENSPNYG00000000717smarca4a9690.629Pundamilia_nyererei
ENSDARG00000077226smarca4a9585.052ENSPNYG00000023995-9885.126Pundamilia_nyererei
ENSDARG00000077226smarca4a9985.705ENSPNAG00000024136smarca4a9887.259Pygocentrus_nattereri
ENSDARG00000077226smarca4a9588.489ENSPNAG00000006636-9388.224Pygocentrus_nattereri
ENSDARG00000077226smarca4a10087.158ENSRNOG00000009271Smarca410086.914Rattus_norvegicus
ENSDARG00000077226smarca4a10086.501ENSRBIG00000038696SMARCA49987.165Rhinopithecus_bieti
ENSDARG00000077226smarca4a10087.287ENSRROG00000045509SMARCA410087.165Rhinopithecus_roxellana
ENSDARG00000077226smarca4a9987.369ENSSBOG00000026896SMARCA49887.898Saimiri_boliviensis_boliviensis
ENSDARG00000077226smarca4a10088.178ENSSHAG00000001642SMARCA410087.812Sarcophilus_harrisii
ENSDARG00000077226smarca4a9683.396ENSSFOG00015009921-9585.045Scleropages_formosus
ENSDARG00000077226smarca4a10091.748ENSSFOG00015013823smarca410091.198Scleropages_formosus
ENSDARG00000077226smarca4a10088.761ENSSMAG00000003200smarca4a10088.701Scophthalmus_maximus
ENSDARG00000077226smarca4a10083.383ENSSMAG00000014082-9984.002Scophthalmus_maximus
ENSDARG00000077226smarca4a10084.906ENSSDUG00000017298smarca4a10085.610Seriola_dumerili
ENSDARG00000077226smarca4a9987.454ENSSDUG00000005388-9886.449Seriola_dumerili
ENSDARG00000077226smarca4a9586.486ENSSLDG00000023663-9787.956Seriola_lalandi_dorsalis
ENSDARG00000077226smarca4a10089.897ENSSLDG00000024486smarca4a10089.595Seriola_lalandi_dorsalis
ENSDARG00000077226smarca4a6296.894ENSSARG00000013477SMARCA48296.894Sorex_araneus
ENSDARG00000077226smarca4a9584.939ENSSPUG00000004558SMARCA49884.493Sphenodon_punctatus
ENSDARG00000077226smarca4a9988.940ENSSPAG00000012533-9884.498Stegastes_partitus
ENSDARG00000077226smarca4a10089.534ENSSPAG00000004248smarca4a10089.232Stegastes_partitus
ENSDARG00000077226smarca4a10087.310ENSSSCG00000013629SMARCA410087.067Sus_scrofa
ENSDARG00000077226smarca4a5284.460ENSTGUG00000015488-9884.091Taeniopygia_guttata
ENSDARG00000077226smarca4a9585.013ENSTRUG00000001378SMARCA49885.851Takifugu_rubripes
ENSDARG00000077226smarca4a9084.200ENSTRUG00000004885smarca4a10083.776Takifugu_rubripes
ENSDARG00000077226smarca4a10083.932ENSTNIG00000004536SMARCA410083.857Tetraodon_nigroviridis
ENSDARG00000077226smarca4a7388.298ENSTNIG00000004859-10088.298Tetraodon_nigroviridis
ENSDARG00000077226smarca4a10084.537ENSTTRG00000009519SMARCA410083.701Tursiops_truncatus
ENSDARG00000077226smarca4a10087.287ENSUAMG00000014661SMARCA410087.044Ursus_americanus
ENSDARG00000077226smarca4a9583.397ENSUMAG00000022005SMARCA49991.156Ursus_maritimus
ENSDARG00000077226smarca4a10086.199ENSVVUG00000017820SMARCA49787.044Vulpes_vulpes
ENSDARG00000077226smarca4a10083.164ENSXETG00000009355smarca410082.564Xenopus_tropicalis
ENSDARG00000077226smarca4a9982.579ENSXCOG00000013494-9783.920Xiphophorus_couchianus
ENSDARG00000077226smarca4a10085.603ENSXMAG00000007030-9985.972Xiphophorus_maculatus
ENSDARG00000077226smarca4a10087.849ENSXMAG00000006321smarca4a10088.153Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000185activation of MAPKKK activity12748389.IMPProcess
GO:0001947heart looping21304516.IMPProcess
GO:0003406retinal pigment epithelium development24426776.IMPProcess
GO:0003407neural retina development10769241.IMPProcess
GO:0005524ATP binding-IEAFunction
GO:0005634nucleus-IEAComponent
GO:0006355regulation of transcription, DNA-templated-IEAProcess
GO:0007417central nervous system development16894598.IMPProcess
GO:0010842retina layer formation18753621.IMPProcess
GO:0014032neural crest cell development16894598.IMPProcess
GO:0014033neural crest cell differentiation26553192.IMPProcess
GO:0016514SWI/SNF complex-IEAComponent
GO:0016817hydrolase activity, acting on acid anhydrides-IEAFunction
GO:0016887ATPase activity-IEAFunction
GO:0021634optic nerve formation18753621.IMPProcess
GO:0030182neuron differentiation18753621.IMPProcess
GO:0031101fin regeneration18950614.IMPProcess
GO:0042393histone binding-IEAFunction
GO:0043044ATP-dependent chromatin remodeling-IEAProcess
GO:0048596embryonic camera-type eye morphogenesis12748389.IMPProcess
GO:0048703embryonic viscerocranium morphogenesis26553192.IMPProcess
GO:0060038cardiac muscle cell proliferation21304516.IMPProcess
GO:0060059embryonic retina morphogenesis in camera-type eye18753621.IMPProcess
GO:0060973cell migration involved in heart development21304516.IMPProcess

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