EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDARG00000077239 (Gene tree)
Gene ID: 100149646
Gene Symbol: si:ch211-165i18.2
Alias: -
Full Name: si:ch211-165i18.2
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 6273 bases
Position: chr4:73606482-73612754
Accession: ZDB-GENE-070705-77
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000125149	Endonuclease_NS	PF01223.23	9.8e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000150765	-	2232	-	ENSDARP00000125149	595 (aa)	-	A5PM73

Gene Model

Click here to download ENSDARG00000077239's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000077239's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000077239	si:ch211-165i18.2	52	39.871	ENSCPBG00000007740	-	66	39.871	Chrysemys_picta_bellii
ENSDARG00000077239	si:ch211-165i18.2	99	34.790	ENSCPBG00000009952	-	99	34.790	Chrysemys_picta_bellii
ENSDARG00000077239	si:ch211-165i18.2	52	30.351	ENSCPBG00000024041	ENDOD1	59	30.351	Chrysemys_picta_bellii
ENSDARG00000077239	si:ch211-165i18.2	100	34.615	ENSCPBG00000005639	-	99	34.615	Chrysemys_picta_bellii
ENSDARG00000077239	si:ch211-165i18.2	50	30.097	ENSELUG00000023889	-	98	30.097	Esox_lucius
ENSDARG00000077239	si:ch211-165i18.2	100	33.858	ENSGAGG00000016563	-	99	33.858	Gopherus_agassizii
ENSDARG00000077239	si:ch211-165i18.2	81	35.088	ENSLOCG00000001272	-	100	35.088	Lepisosteus_oculatus
ENSDARG00000077239	si:ch211-165i18.2	92	36.637	ENSMZEG00005024062	si:ch211-165i18.2	99	36.637	Maylandia_zebra
ENSDARG00000077239	si:ch211-165i18.2	92	40.385	ENSORLG00000003245	si:ch211-165i18.2	98	40.531	Oryzias_latipes
ENSDARG00000077239	si:ch211-165i18.2	91	40.569	ENSORLG00020006296	-	98	40.569	Oryzias_latipes_hni
ENSDARG00000077239	si:ch211-165i18.2	91	39.858	ENSORLG00020006331	-	98	39.858	Oryzias_latipes_hni
ENSDARG00000077239	si:ch211-165i18.2	91	39.502	ENSORLG00015009196	si:ch211-165i18.2	98	39.502	Oryzias_latipes_hsok
ENSDARG00000077239	si:ch211-165i18.2	99	37.752	ENSOMEG00000007309	-	100	37.752	Oryzias_melastigma
ENSDARG00000077239	si:ch211-165i18.2	72	38.688	ENSOMEG00000007367	-	97	38.688	Oryzias_melastigma
ENSDARG00000077239	si:ch211-165i18.2	92	38.772	ENSOMEG00000012820	-	99	38.772	Oryzias_melastigma
ENSDARG00000077239	si:ch211-165i18.2	61	48.148	ENSPKIG00000007340	-	88	49.091	Paramormyrops_kingsleyae
ENSDARG00000077239	si:ch211-165i18.2	99	45.484	ENSPKIG00000019032	-	99	45.484	Paramormyrops_kingsleyae
ENSDARG00000077239	si:ch211-165i18.2	50	44.308	ENSPKIG00000016597	-	95	44.308	Paramormyrops_kingsleyae
ENSDARG00000077239	si:ch211-165i18.2	99	46.141	ENSPKIG00000003602	-	99	46.141	Paramormyrops_kingsleyae
ENSDARG00000077239	si:ch211-165i18.2	97	43.939	ENSPKIG00000007324	-	98	43.939	Paramormyrops_kingsleyae
ENSDARG00000077239	si:ch211-165i18.2	50	44.518	ENSPSIG00000009892	-	97	44.518	Pelodiscus_sinensis
ENSDARG00000077239	si:ch211-165i18.2	90	40.000	ENSPNYG00000003385	si:ch211-165i18.2	98	40.000	Pundamilia_nyererei
ENSDARG00000077239	si:ch211-165i18.2	89	40.108	ENSPNAG00000010161	si:ch211-165i18.2	99	40.451	Pygocentrus_nattereri
ENSDARG00000077239	si:ch211-165i18.2	51	30.030	ENSPNAG00000006702	-	99	30.030	Pygocentrus_nattereri
ENSDARG00000077239	si:ch211-165i18.2	99	39.870	ENSSFOG00015005448	-	99	39.617	Scleropages_formosus
ENSDARG00000077239	si:ch211-165i18.2	50	30.818	ENSSLDG00000000636	-	97	30.818	Seriola_lalandi_dorsalis
ENSDARG00000077239	si:ch211-165i18.2	50	30.097	ENSTRUG00000020325	si:dkey-85k7.11	71	30.097	Takifugu_rubripes
ENSDARG00000077239	si:ch211-165i18.2	52	31.153	ENSXMAG00000021219	si:dkey-85k7.11	94	31.153	Xiphophorus_maculatus