EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000077516 (Gene tree)
Gene ID: 567383
Gene Symbol: recql4
Alias: -
Full Name: RecQ helicase-like 4
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 69440 bases
Position: chr19:2752933-2822372
Accession: ZDB-GENE-091112-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000103321	zf-CCHC	PF00098.23	1.2e-05	1	1
ENSDARP00000107555	zf-CCHC	PF00098.23	1.2e-05	1	1
ENSDARP00000107555	DEAD	PF00270.29	4.4e-14	1	1
ENSDARP00000103321	DEAD	PF00270.29	4.5e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000109130	-	5578	-	ENSDARP00000103321	1476 (aa)	-	E7F8R0
ENSDART00000122385	-	8798	XM_001920596	ENSDARP00000107555	1459 (aa)	XP_001920631	E7F2M7

Gene Model

Click here to download ENSDARG00000077516's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000077516's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000077516	recql4	91	47.147	ENSG00000160957	RECQL4	99	58.678	Homo_sapiens
ENSDARG00000077516	recql4	100	56.165	ENSAPOG00000016945	recql4	100	55.773	Acanthochromis_polyacanthus
ENSDARG00000077516	recql4	76	50.202	ENSAMEG00000005460	RECQL4	89	49.798	Ailuropoda_melanoleuca
ENSDARG00000077516	recql4	95	62.500	ENSAOCG00000004254	recql4	100	56.992	Amphiprion_ocellaris
ENSDARG00000077516	recql4	85	65.505	ENSAPEG00000005709	recql4	90	65.596	Amphiprion_percula
ENSDARG00000077516	recql4	65	79.167	ENSATEG00000011464	recql4	99	81.250	Anabas_testudineus
ENSDARG00000077516	recql4	89	58.532	ENSACAG00000010589	RECQL4	97	58.044	Anolis_carolinensis
ENSDARG00000077516	recql4	85	48.978	ENSANAG00000024497	RECQL4	91	48.160	Aotus_nancymaae
ENSDARG00000077516	recql4	95	61.992	ENSACLG00000011982	recql4	89	62.241	Astatotilapia_calliptera
ENSDARG00000077516	recql4	80	66.137	ENSAMXG00000004768	recql4	99	65.665	Astyanax_mexicanus
ENSDARG00000077516	recql4	91	46.305	ENSCJAG00000021401	RECQL4	98	46.492	Callithrix_jacchus
ENSDARG00000077516	recql4	65	48.820	ENSCAFG00000001569	RECQL4	68	54.897	Canis_familiaris
ENSDARG00000077516	recql4	85	46.421	ENSCHIG00000011146	RECQL4	90	45.982	Capra_hircus
ENSDARG00000077516	recql4	66	48.861	ENSTSYG00000012090	RECQL4	99	48.551	Carlito_syrichta
ENSDARG00000077516	recql4	67	49.333	ENSCAPG00000017735	RECQL4	83	48.770	Cavia_aperea
ENSDARG00000077516	recql4	83	49.589	ENSCPOG00000015563	RECQL4	88	49.180	Cavia_porcellus
ENSDARG00000077516	recql4	88	48.235	ENSCCAG00000035749	RECQL4	98	46.816	Cebus_capucinus
ENSDARG00000077516	recql4	86	49.290	ENSCATG00000030745	RECQL4	91	49.036	Cercocebus_atys
ENSDARG00000077516	recql4	87	48.409	ENSCLAG00000013847	RECQL4	88	50.154	Chinchilla_lanigera
ENSDARG00000077516	recql4	90	47.943	ENSCSAG00000008275	RECQL4	90	49.795	Chlorocebus_sabaeus
ENSDARG00000077516	recql4	66	58.537	ENSCPBG00000019003	RECQL4	100	55.521	Chrysemys_picta_bellii
ENSDARG00000077516	recql4	71	47.313	ENSCANG00000043305	RECQL4	75	49.134	Colobus_angolensis_palliatus
ENSDARG00000077516	recql4	87	48.293	ENSCGRG00001015863	Recql4	92	48.318	Cricetulus_griseus_chok1gshd
ENSDARG00000077516	recql4	68	48.543	ENSCGRG00000013535	Recql4	89	48.571	Cricetulus_griseus_crigri
ENSDARG00000077516	recql4	59	72.401	ENSCSEG00000014814	recql4	98	72.401	Cynoglossus_semilaevis
ENSDARG00000077516	recql4	80	67.416	ENSCVAG00000007993	recql4	100	60.882	Cyprinodon_variegatus
ENSDARG00000077516	recql4	73	52.025	ENSDNOG00000002674	RECQL4	89	53.925	Dasypus_novemcinctus
ENSDARG00000077516	recql4	89	44.627	ENSDORG00000002297	Recql4	92	44.873	Dipodomys_ordii
ENSDARG00000077516	recql4	74	50.990	ENSECAG00000018665	RECQL4	88	53.030	Equus_caballus
ENSDARG00000077516	recql4	68	48.161	ENSEEUG00000005223	RECQL4	76	48.046	Erinaceus_europaeus
ENSDARG00000077516	recql4	100	62.367	ENSELUG00000022177	recql4	100	63.464	Esox_lucius
ENSDARG00000077516	recql4	89	46.026	ENSFDAG00000014917	RECQL4	89	48.560	Fukomys_damarensis
ENSDARG00000077516	recql4	80	71.935	ENSGMOG00000001340	recql4	92	71.689	Gadus_morhua
ENSDARG00000077516	recql4	87	52.786	ENSGALG00000042375	-	67	52.322	Gallus_gallus
ENSDARG00000077516	recql4	87	66.298	ENSGAFG00000009575	recql4	99	56.811	Gambusia_affinis
ENSDARG00000077516	recql4	81	72.043	ENSGACG00000015014	recql4	99	56.571	Gasterosteus_aculeatus
ENSDARG00000077516	recql4	100	53.325	ENSGAGG00000021941	RECQL4	100	52.508	Gopherus_agassizii
ENSDARG00000077516	recql4	91	46.960	ENSGGOG00000014319	RECQL4	99	49.329	Gorilla_gorilla
ENSDARG00000077516	recql4	95	62.327	ENSHBUG00000019085	recql4	89	62.625	Haplochromis_burtoni
ENSDARG00000077516	recql4	71	47.373	ENSHGLG00000015925	RECQL4	75	49.692	Heterocephalus_glaber_female
ENSDARG00000077516	recql4	71	47.373	ENSHGLG00100007626	RECQL4	78	49.692	Heterocephalus_glaber_male
ENSDARG00000077516	recql4	65	71.665	ENSHCOG00000016157	recql4	100	71.768	Hippocampus_comes
ENSDARG00000077516	recql4	100	66.406	ENSIPUG00000004473	recql4	100	66.471	Ictalurus_punctatus
ENSDARG00000077516	recql4	77	53.210	ENSJJAG00000017588	Recql4	93	48.673	Jaculus_jaculus
ENSDARG00000077516	recql4	75	68.934	ENSKMAG00000009537	recql4	88	65.014	Kryptolebias_marmoratus
ENSDARG00000077516	recql4	59	71.163	ENSLBEG00000015884	recql4	97	71.279	Labrus_bergylta
ENSDARG00000077516	recql4	100	55.526	ENSLACG00000004466	recql4	100	55.060	Latimeria_chalumnae
ENSDARG00000077516	recql4	100	62.210	ENSLOCG00000007478	recql4	100	62.053	Lepisosteus_oculatus
ENSDARG00000077516	recql4	71	48.594	ENSLAFG00000009512	RECQL4	77	50.204	Loxodonta_africana
ENSDARG00000077516	recql4	86	49.185	ENSMFAG00000038185	RECQL4	91	49.032	Macaca_fascicularis
ENSDARG00000077516	recql4	86	49.389	ENSMMUG00000015588	RECQL4	91	49.134	Macaca_mulatta
ENSDARG00000077516	recql4	86	48.778	ENSMNEG00000036079	RECQL4	91	48.726	Macaca_nemestrina
ENSDARG00000077516	recql4	67	49.189	ENSMLEG00000036034	RECQL4	99	49.328	Mandrillus_leucophaeus
ENSDARG00000077516	recql4	81	70.862	ENSMAMG00000015565	recql4	93	63.050	Mastacembelus_armatus
ENSDARG00000077516	recql4	55	73.724	ENSMZEG00005026699	recql4	94	73.724	Maylandia_zebra
ENSDARG00000077516	recql4	85	49.448	ENSMAUG00000008628	Recql4	91	49.039	Mesocricetus_auratus
ENSDARG00000077516	recql4	66	49.121	ENSMICG00000015923	RECQL4	99	48.914	Microcebus_murinus
ENSDARG00000077516	recql4	90	47.872	ENSMOCG00000009648	Recql4	93	48.940	Microtus_ochrogaster
ENSDARG00000077516	recql4	59	68.974	ENSMMOG00000018356	recql4	98	68.974	Mola_mola
ENSDARG00000077516	recql4	95	50.135	ENSMODG00000011014	RECQL4	99	48.774	Monodelphis_domestica
ENSDARG00000077516	recql4	55	72.084	ENSMALG00000007361	recql4	93	72.084	Monopterus_albus
ENSDARG00000077516	recql4	89	47.723	MGP_CAROLIEiJ_G0019945	Recql4	95	47.293	Mus_caroli
ENSDARG00000077516	recql4	89	48.102	ENSMUSG00000033762	Recql4	95	47.863	Mus_musculus
ENSDARG00000077516	recql4	89	47.628	MGP_PahariEiJ_G0019955	Recql4	95	47.388	Mus_pahari
ENSDARG00000077516	recql4	89	48.102	MGP_SPRETEiJ_G0020848	Recql4	95	47.719	Mus_spretus
ENSDARG00000077516	recql4	71	47.619	ENSMPUG00000006086	RECQL4	84	48.835	Mustela_putorius_furo
ENSDARG00000077516	recql4	89	48.402	ENSMLUG00000011295	RECQL4	90	50.607	Myotis_lucifugus
ENSDARG00000077516	recql4	87	49.797	ENSNGAG00000004346	Recql4	93	49.797	Nannospalax_galili
ENSDARG00000077516	recql4	70	43.004	ENSNLEG00000010900	RECQL4	89	47.674	Nomascus_leucogenys
ENSDARG00000077516	recql4	67	53.807	ENSMEUG00000001818	-	99	53.176	Notamacropus_eugenii
ENSDARG00000077516	recql4	69	52.840	ENSOPRG00000002588	RECQL4	75	52.689	Ochotona_princeps
ENSDARG00000077516	recql4	83	50.462	ENSODEG00000012082	RECQL4	88	50.309	Octodon_degus
ENSDARG00000077516	recql4	95	62.557	ENSONIG00000019801	recql4	93	62.137	Oreochromis_niloticus
ENSDARG00000077516	recql4	86	50.559	ENSOANG00000003526	RECQL4	96	50.183	Ornithorhynchus_anatinus
ENSDARG00000077516	recql4	86	66.440	ENSORLG00000024764	recql4	99	53.590	Oryzias_latipes
ENSDARG00000077516	recql4	60	75.893	ENSOMEG00000023534	recql4	87	75.893	Oryzias_melastigma
ENSDARG00000077516	recql4	86	49.137	ENSOGAG00000013008	RECQL4	92	49.036	Otolemur_garnettii
ENSDARG00000077516	recql4	67	45.821	ENSOARG00000012917	RECQL4	85	49.374	Ovis_aries
ENSDARG00000077516	recql4	72	46.960	ENSPPAG00000038772	RECQL4	92	46.866	Pan_paniscus
ENSDARG00000077516	recql4	91	47.053	ENSPTRG00000048119	RECQL4	99	49.536	Pan_troglodytes
ENSDARG00000077516	recql4	86	49.290	ENSPANG00000024705	RECQL4	91	48.832	Papio_anubis
ENSDARG00000077516	recql4	100	64.000	ENSPKIG00000020206	recql4	100	64.042	Paramormyrops_kingsleyae
ENSDARG00000077516	recql4	55	43.843	ENSPSIG00000003148	-	98	43.117	Pelodiscus_sinensis
ENSDARG00000077516	recql4	93	61.005	ENSPMGG00000021408	recql4	98	60.754	Periophthalmus_magnuspinnatus
ENSDARG00000077516	recql4	88	50.306	ENSPEMG00000008586	Recql4	95	50.000	Peromyscus_maniculatus_bairdii
ENSDARG00000077516	recql4	74	68.100	ENSPFOG00000005814	recql4	99	56.814	Poecilia_formosa
ENSDARG00000077516	recql4	74	68.011	ENSPLAG00000011704	recql4	73	68.190	Poecilia_latipinna
ENSDARG00000077516	recql4	74	68.011	ENSPMEG00000011683	recql4	73	68.190	Poecilia_mexicana
ENSDARG00000077516	recql4	85	70.964	ENSPREG00000012196	recql4	92	70.755	Poecilia_reticulata
ENSDARG00000077516	recql4	89	48.500	ENSPPYG00000018984	RECQL4	91	49.440	Pongo_abelii
ENSDARG00000077516	recql4	66	50.000	ENSPCOG00000013744	RECQL4	99	49.690	Propithecus_coquereli
ENSDARG00000077516	recql4	83	53.480	ENSPVAG00000006784	RECQL4	95	48.679	Pteropus_vampyrus
ENSDARG00000077516	recql4	55	73.350	ENSPNYG00000008927	recql4	94	73.350	Pundamilia_nyererei
ENSDARG00000077516	recql4	99	69.033	ENSPNAG00000005987	recql4	100	69.122	Pygocentrus_nattereri
ENSDARG00000077516	recql4	81	46.439	ENSRNOG00000032446	Recql4	95	46.198	Rattus_norvegicus
ENSDARG00000077516	recql4	66	49.483	ENSRROG00000040848	RECQL4	99	49.483	Rhinopithecus_roxellana
ENSDARG00000077516	recql4	74	45.545	ENSSBOG00000021445	RECQL4	83	47.108	Saimiri_boliviensis_boliviensis
ENSDARG00000077516	recql4	96	52.500	ENSSHAG00000010333	-	99	52.344	Sarcophilus_harrisii
ENSDARG00000077516	recql4	94	79.901	ENSSFOG00015010493	recql4	99	79.777	Scleropages_formosus
ENSDARG00000077516	recql4	55	71.357	ENSSMAG00000005002	recql4	89	71.357	Scophthalmus_maximus
ENSDARG00000077516	recql4	60	72.222	ENSSDUG00000013245	recql4	99	72.222	Seriola_dumerili
ENSDARG00000077516	recql4	60	72.346	ENSSLDG00000016407	recql4	99	72.099	Seriola_lalandi_dorsalis
ENSDARG00000077516	recql4	54	52.000	ENSSARG00000013351	-	71	52.000	Sorex_araneus
ENSDARG00000077516	recql4	67	54.536	ENSSPUG00000018087	RECQL4	94	58.846	Sphenodon_punctatus
ENSDARG00000077516	recql4	55	70.932	ENSSPAG00000006827	recql4	93	70.932	Stegastes_partitus
ENSDARG00000077516	recql4	75	48.842	ENSSSCG00000025736	RECQL4	95	49.645	Sus_scrofa
ENSDARG00000077516	recql4	71	80.282	ENSTRUG00000012749	recql4	98	80.282	Takifugu_rubripes
ENSDARG00000077516	recql4	98	62.977	ENSTNIG00000017539	recql4	93	62.715	Tetraodon_nigroviridis
ENSDARG00000077516	recql4	72	46.919	ENSUMAG00000019403	RECQL4	74	49.843	Ursus_maritimus
ENSDARG00000077516	recql4	74	59.567	ENSXETG00000016582	recql4	77	58.903	Xenopus_tropicalis
ENSDARG00000077516	recql4	55	71.092	ENSXCOG00000019857	recql4	91	71.092	Xiphophorus_couchianus
ENSDARG00000077516	recql4	55	71.357	ENSXMAG00000015315	recql4	91	71.092	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0008270	zinc ion binding	-	IEA	Function
GO:0046872	metal ion binding	-	IEA	Function