EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000077653 (Gene tree)
Gene ID: 100003036
Gene Symbol: rabl6b
Alias: si:ch211-102c2.5
Full Name: RAB%2C member RAS oncogene family-like 6b
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 22773 bases
Position: chr5:26805608-26828380
Accession: ZDB-GENE-081104-97
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000115793	MMR_HSR1	PF01926.23	5.1e-05	1	1
ENSDARP00000098339	MMR_HSR1	PF01926.23	5.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000188981	-	297	-	ENSDARP00000150476	98 (aa)	-	A0A2R8Q879
ENSDART00000111019	-	3013	-	ENSDARP00000098339	689 (aa)	-	E7EYK1
ENSDART00000142753	-	2704	XM_005171945	ENSDARP00000115793	764 (aa)	XP_005172002	A0A0J9YIW5

Gene Model

Click here to download ENSDARG00000077653's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000077653's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000077653	rabl6b	99	63.768	ENSAMXG00000038771	rabl6b	99	60.495	Astyanax_mexicanus
ENSDARG00000077653	rabl6b	98	62.139	ENSCSEG00000012430	-	50	36.779	Cynoglossus_semilaevis
ENSDARG00000077653	rabl6b	99	61.972	ENSELUG00000004448	rabl6b	90	69.635	Esox_lucius
ENSDARG00000077653	rabl6b	99	62.861	ENSGAFG00000013561	rabl6b	99	66.736	Gambusia_affinis
ENSDARG00000077653	rabl6b	93	57.399	ENSLOCG00000001402	rabl6b	80	88.980	Lepisosteus_oculatus
ENSDARG00000077653	rabl6b	69	62.012	ENSMZEG00005003942	rabl6b	52	69.466	Maylandia_zebra
ENSDARG00000077653	rabl6b	69	64.669	ENSMMOG00000009459	rabl6b	52	79.268	Mola_mola
ENSDARG00000077653	rabl6b	69	61.934	ENSNBRG00000012512	rabl6b	52	68.702	Neolamprologus_brichardi
ENSDARG00000077653	rabl6b	99	64.121	ENSORLG00020017557	rabl6b	99	60.025	Oryzias_latipes_hni
ENSDARG00000077653	rabl6b	99	64.214	ENSORLG00015007848	rabl6b	89	67.184	Oryzias_latipes_hsok
ENSDARG00000077653	rabl6b	99	60.139	ENSPCIG00000023722	RABL6	92	57.719	Phascolarctos_cinereus
ENSDARG00000077653	rabl6b	99	71.449	ENSPNAG00000010857	rabl6b	93	70.655	Pygocentrus_nattereri

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005525	GTP binding	-	IEA	Function