EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000077717 (Gene tree)
Gene ID: 445040
Gene Symbol: rpl29
Alias: zgc:92868
Full Name: ribosomal protein L29
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 4465 bases
Position: chr11:1396170-1400634
Accession: ZDB-GENE-040801-167
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000099277	Ribosomal_L29e	PF01779.17	9.7e-27	1	1
ENSDARP00000142056	Ribosomal_L29e	PF01779.17	9.7e-27	1	1
ENSDARP00000142323	Ribosomal_L29e	PF01779.17	9.7e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000172953	-	436	-	ENSDARP00000142323	64 (aa)	-	Q6DGL4
ENSDART00000173145	-	768	-	-	- (aa)	-	-
ENSDART00000111140	-	323	-	ENSDARP00000099277	64 (aa)	-	Q6DGL4
ENSDART00000173029	-	508	-	ENSDARP00000142056	64 (aa)	-	Q6DGL4

Gene Model

Click here to download ENSDARG00000077717's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000077717's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000077717	rpl29	72	100.000	ENSG00000162244	RPL29	97	94.444	Homo_sapiens
ENSDARG00000077717	rpl29	83	92.453	ENSAPOG00000002586	rpl29	88	89.286	Acanthochromis_polyacanthus
ENSDARG00000077717	rpl29	83	96.226	ENSACIG00000018340	rpl29	95	90.323	Amphilophus_citrinellus
ENSDARG00000077717	rpl29	83	96.226	ENSAOCG00000016652	rpl29	88	92.857	Amphiprion_ocellaris
ENSDARG00000077717	rpl29	83	96.226	ENSAPEG00000005754	rpl29	88	92.857	Amphiprion_percula
ENSDARG00000077717	rpl29	72	97.826	ENSACAG00000006888	RPL29	88	92.982	Anolis_carolinensis
ENSDARG00000077717	rpl29	72	100.000	ENSANAG00000024147	-	77	82.609	Aotus_nancymaae
ENSDARG00000077717	rpl29	97	91.935	ENSACLG00000017820	rpl29	95	91.935	Astatotilapia_calliptera
ENSDARG00000077717	rpl29	100	92.188	ENSAMXG00000038794	rpl29	100	92.188	Astyanax_mexicanus
ENSDARG00000077717	rpl29	81	61.538	WBGene00004443	rpl-29	84	61.538	Caenorhabditis_elegans
ENSDARG00000077717	rpl29	72	100.000	ENSCJAG00000042339	-	77	82.609	Callithrix_jacchus
ENSDARG00000077717	rpl29	72	100.000	ENSCCAG00000027980	-	77	82.609	Cebus_capucinus
ENSDARG00000077717	rpl29	72	89.362	ENSCSAG00000017871	-	50	89.286	Chlorocebus_sabaeus
ENSDARG00000077717	rpl29	81	76.923	ENSCING00000018496	-	90	76.923	Ciona_intestinalis
ENSDARG00000077717	rpl29	95	70.492	ENSCSAVG00000005231	-	100	70.492	Ciona_savignyi
ENSDARG00000077717	rpl29	89	94.737	ENSCGRG00001016452	-	84	94.737	Cricetulus_griseus_chok1gshd
ENSDARG00000077717	rpl29	78	96.000	ENSCSEG00000010267	rpl29	94	88.889	Cynoglossus_semilaevis
ENSDARG00000077717	rpl29	78	100.000	ENSCVAG00000023098	rpl29	98	90.625	Cyprinodon_variegatus
ENSDARG00000077717	rpl29	92	55.932	FBgn0016726	RpL29	78	55.932	Drosophila_melanogaster
ENSDARG00000077717	rpl29	67	90.698	ENSEASG00005005507	-	66	90.698	Equus_asinus_asinus
ENSDARG00000077717	rpl29	88	85.714	ENSELUG00000015592	RL29	80	85.714	Esox_lucius
ENSDARG00000077717	rpl29	97	62.903	ENSFCAG00000043006	-	77	62.903	Felis_catus
ENSDARG00000077717	rpl29	67	72.093	ENSFCAG00000035470	-	58	70.455	Felis_catus
ENSDARG00000077717	rpl29	72	93.478	ENSFALG00000008925	RPL29	84	89.474	Ficedula_albicollis
ENSDARG00000077717	rpl29	100	87.500	ENSFHEG00000015425	rpl29	100	87.500	Fundulus_heteroclitus
ENSDARG00000077717	rpl29	83	86.792	ENSGMOG00000003626	rpl29	82	80.952	Gadus_morhua
ENSDARG00000077717	rpl29	72	97.826	ENSGALG00000026978	RPL29	80	92.982	Gallus_gallus
ENSDARG00000077717	rpl29	100	85.938	ENSGAFG00000012868	rpl29	100	85.938	Gambusia_affinis
ENSDARG00000077717	rpl29	89	91.228	ENSGACG00000007041	rpl29	74	91.228	Gasterosteus_aculeatus
ENSDARG00000077717	rpl29	72	79.167	ENSGAGG00000024203	-	89	79.167	Gopherus_agassizii
ENSDARG00000077717	rpl29	72	100.000	ENSGGOG00000024691	RPL29	60	97.222	Gorilla_gorilla
ENSDARG00000077717	rpl29	97	91.935	ENSHBUG00000010519	rpl29	95	91.935	Haplochromis_burtoni
ENSDARG00000077717	rpl29	78	96.000	ENSHCOG00000000478	rpl29	79	88.889	Hippocampus_comes
ENSDARG00000077717	rpl29	100	87.500	ENSIPUG00000001196	rpl29	100	87.500	Ictalurus_punctatus
ENSDARG00000077717	rpl29	83	100.000	ENSKMAG00000011291	rpl29	100	87.500	Kryptolebias_marmoratus
ENSDARG00000077717	rpl29	83	94.340	ENSLBEG00000016213	rpl29	91	85.484	Labrus_bergylta
ENSDARG00000077717	rpl29	100	82.812	ENSLACG00000018622	rpl29	97	82.812	Latimeria_chalumnae
ENSDARG00000077717	rpl29	88	89.286	ENSLACG00000018031	-	91	82.812	Latimeria_chalumnae
ENSDARG00000077717	rpl29	72	95.652	ENSLOCG00000013798	rpl29	100	84.615	Lepisosteus_oculatus
ENSDARG00000077717	rpl29	83	96.226	ENSMAMG00000014274	rpl29	59	92.857	Mastacembelus_armatus
ENSDARG00000077717	rpl29	97	91.935	ENSMZEG00005013519	rpl29	95	91.935	Maylandia_zebra
ENSDARG00000077717	rpl29	72	97.826	ENSMGAG00000001213	RPL29	80	92.982	Meleagris_gallopavo
ENSDARG00000077717	rpl29	77	85.714	ENSMICG00000049466	-	74	85.714	Microcebus_murinus
ENSDARG00000077717	rpl29	97	88.710	ENSMMOG00000010430	rpl29	95	88.710	Mola_mola
ENSDARG00000077717	rpl29	83	98.113	ENSMALG00000009023	rpl29	72	94.643	Monopterus_albus
ENSDARG00000077717	rpl29	72	100.000	ENSMUSG00000048758	Rpl29	84	94.737	Mus_musculus
ENSDARG00000077717	rpl29	97	91.935	ENSNBRG00000022109	rpl29	95	91.935	Neolamprologus_brichardi
ENSDARG00000077717	rpl29	97	91.935	ENSONIG00000014377	rpl29	97	91.935	Oreochromis_niloticus
ENSDARG00000077717	rpl29	100	89.062	ENSORLG00000023610	rpl29	66	89.062	Oryzias_latipes
ENSDARG00000077717	rpl29	100	89.062	ENSORLG00020018665	rpl29	66	89.062	Oryzias_latipes_hni
ENSDARG00000077717	rpl29	100	89.062	ENSORLG00015014455	rpl29	66	89.062	Oryzias_latipes_hsok
ENSDARG00000077717	rpl29	97	91.935	ENSOMEG00000019919	rpl29	95	91.935	Oryzias_melastigma
ENSDARG00000077717	rpl29	56	97.222	ENSPPAG00000037142	-	61	97.222	Pan_paniscus
ENSDARG00000077717	rpl29	94	68.333	ENSPPRG00000011689	-	80	75.000	Panthera_pardus
ENSDARG00000077717	rpl29	95	63.934	ENSPTIG00000011913	-	63	73.077	Panthera_tigris_altaica
ENSDARG00000077717	rpl29	72	100.000	ENSPTRG00000043237	RPL29	61	97.222	Pan_troglodytes
ENSDARG00000077717	rpl29	72	93.478	ENSPKIG00000025048	rpl29	83	92.727	Paramormyrops_kingsleyae
ENSDARG00000077717	rpl29	72	100.000	ENSPSIG00000014699	RPL29	90	94.737	Pelodiscus_sinensis
ENSDARG00000077717	rpl29	88	91.071	ENSPMGG00000005361	rpl29	82	91.071	Periophthalmus_magnuspinnatus
ENSDARG00000077717	rpl29	97	91.935	ENSPFOG00000011385	rpl29	100	91.935	Poecilia_formosa
ENSDARG00000077717	rpl29	78	96.000	ENSPLAG00000012042	rpl29	98	87.500	Poecilia_latipinna
ENSDARG00000077717	rpl29	78	98.000	ENSPMEG00000018297	rpl29	98	89.062	Poecilia_mexicana
ENSDARG00000077717	rpl29	78	98.000	ENSPREG00000007066	rpl29	98	89.062	Poecilia_reticulata
ENSDARG00000077717	rpl29	97	91.935	ENSPNYG00000019481	rpl29	95	91.935	Pundamilia_nyererei
ENSDARG00000077717	rpl29	100	96.875	ENSPNAG00000007550	rpl29	100	96.875	Pygocentrus_nattereri
ENSDARG00000077717	rpl29	84	88.889	ENSRNOG00000025794	AABR07021239.1	72	88.889	Rattus_norvegicus
ENSDARG00000077717	rpl29	72	73.913	YFR032C-A	RPL29	78	73.913	Saccharomyces_cerevisiae
ENSDARG00000077717	rpl29	83	96.226	ENSSMAG00000013571	rpl29	100	84.375	Scophthalmus_maximus
ENSDARG00000077717	rpl29	72	65.957	ENSSDUG00000020458	-	76	65.957	Seriola_dumerili
ENSDARG00000077717	rpl29	78	96.000	ENSSDUG00000016140	rpl29	88	92.857	Seriola_dumerili
ENSDARG00000077717	rpl29	78	96.000	ENSSLDG00000003932	rpl29	88	92.857	Seriola_lalandi_dorsalis
ENSDARG00000077717	rpl29	72	97.826	ENSSPUG00000003760	RPL29	90	92.982	Sphenodon_punctatus
ENSDARG00000077717	rpl29	83	86.792	ENSSPAG00000020292	rpl29	92	81.356	Stegastes_partitus
ENSDARG00000077717	rpl29	88	66.071	ENSSSCG00000031314	-	89	66.071	Sus_scrofa
ENSDARG00000077717	rpl29	59	94.737	ENSSSCG00000037047	-	100	89.796	Sus_scrofa
ENSDARG00000077717	rpl29	72	93.478	ENSTGUG00000006027	RPL29	90	89.474	Taeniopygia_guttata
ENSDARG00000077717	rpl29	100	81.250	ENSTRUG00000022273	rpl29	97	81.250	Takifugu_rubripes
ENSDARG00000077717	rpl29	83	92.453	ENSTNIG00000014816	rpl29	90	87.097	Tetraodon_nigroviridis
ENSDARG00000077717	rpl29	86	81.818	ENSTBEG00000000807	-	67	81.818	Tupaia_belangeri
ENSDARG00000077717	rpl29	83	85.965	ENSUAMG00000002601	-	100	85.965	Ursus_americanus
ENSDARG00000077717	rpl29	72	93.478	ENSVVUG00000012400	-	100	89.474	Vulpes_vulpes
ENSDARG00000077717	rpl29	72	100.000	ENSXETG00000010811	rpl29	76	94.737	Xenopus_tropicalis
ENSDARG00000077717	rpl29	88	94.643	ENSXCOG00000013543	rpl29	88	94.643	Xiphophorus_couchianus
ENSDARG00000077717	rpl29	100	85.938	ENSXMAG00000020948	rpl29	100	85.938	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0002181	cytoplasmic translation	21873635.	IBA	Process
GO:0003735	structural constituent of ribosome	21873635.	IBA	Function
GO:0003735	structural constituent of ribosome	-	IEA	Function
GO:0005840	ribosome	-	IEA	Component
GO:0006412	translation	-	IEA	Process
GO:0022625	cytosolic large ribosomal subunit	21873635.	IBA	Component