EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000078159 (Gene tree)
Gene ID: 569236
Gene Symbol: zgc:175284
Alias: -
Full Name: zgc:175284
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 9536 bases
Position: chr22:2549044-2558579
Accession: ZDB-GENE-080219-49
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000097277	zf-C2H2	PF00096.26	6.8e-55	1	11
ENSDARP00000097277	zf-C2H2	PF00096.26	6.8e-55	2	11
ENSDARP00000097277	zf-C2H2	PF00096.26	6.8e-55	3	11
ENSDARP00000097277	zf-C2H2	PF00096.26	6.8e-55	4	11
ENSDARP00000097277	zf-C2H2	PF00096.26	6.8e-55	5	11
ENSDARP00000097277	zf-C2H2	PF00096.26	6.8e-55	6	11
ENSDARP00000097277	zf-C2H2	PF00096.26	6.8e-55	7	11
ENSDARP00000097277	zf-C2H2	PF00096.26	6.8e-55	8	11
ENSDARP00000097277	zf-C2H2	PF00096.26	6.8e-55	9	11
ENSDARP00000097277	zf-C2H2	PF00096.26	6.8e-55	10	11
ENSDARP00000097277	zf-C2H2	PF00096.26	6.8e-55	11	11
ENSDARP00000123460	zf-C2H2	PF00096.26	5.8e-28	1	6
ENSDARP00000123460	zf-C2H2	PF00096.26	5.8e-28	2	6
ENSDARP00000123460	zf-C2H2	PF00096.26	5.8e-28	3	6
ENSDARP00000123460	zf-C2H2	PF00096.26	5.8e-28	4	6
ENSDARP00000123460	zf-C2H2	PF00096.26	5.8e-28	5	6
ENSDARP00000123460	zf-C2H2	PF00096.26	5.8e-28	6	6
ENSDARP00000097277	zf-met	PF12874.7	5.8e-16	1	2
ENSDARP00000097277	zf-met	PF12874.7	5.8e-16	2	2
ENSDARP00000123460	zf-met	PF12874.7	7.6e-13	1	4
ENSDARP00000123460	zf-met	PF12874.7	7.6e-13	2	4
ENSDARP00000123460	zf-met	PF12874.7	7.6e-13	3	4
ENSDARP00000123460	zf-met	PF12874.7	7.6e-13	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000106499	-	1792	-	ENSDARP00000097277	425 (aa)	-	B8JM03
ENSDART00000146337	-	873	-	ENSDARP00000123460	254 (aa)	-	B8JM02

Gene Model

Click here to download ENSDARG00000078159's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000078159's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000078159	zgc:175284	100	48.780	ENSDARG00000113011	zgc:113102	95	47.893
ENSDARG00000078159	zgc:175284	100	61.765	ENSDARG00000077085	zgc:110821	100	63.846
ENSDARG00000078159	zgc:175284	100	55.294	ENSDARG00000100587	zgc:113886	99	42.417
ENSDARG00000078159	zgc:175284	88	38.611	ENSDARG00000104807	si:ch73-221f6.3	73	38.292
ENSDARG00000078159	zgc:175284	86	47.324	ENSDARG00000098898	si:ch211-255f4.2	95	60.284
ENSDARG00000078159	zgc:175284	100	51.575	ENSDARG00000112141	znf1169	87	50.000
ENSDARG00000078159	zgc:175284	100	45.763	ENSDARG00000111614	znf1183	88	48.649
ENSDARG00000078159	zgc:175284	87	48.624	ENSDARG00000103777	znf1001	99	48.624
ENSDARG00000078159	zgc:175284	98	54.023	ENSDARG00000104798	BX510922.2	98	41.446
ENSDARG00000078159	zgc:175284	93	69.504	ENSDARG00000095704	si:dkey-4c15.13	100	69.504
ENSDARG00000078159	zgc:175284	90	51.282	ENSDARG00000088051	AL935044.1	99	47.550
ENSDARG00000078159	zgc:175284	100	68.085	ENSDARG00000071833	znf1162	100	69.118
ENSDARG00000078159	zgc:175284	88	49.275	ENSDARG00000115857	znf1001	98	49.045
ENSDARG00000078159	zgc:175284	100	48.936	ENSDARG00000092605	znf1003	95	49.462
ENSDARG00000078159	zgc:175284	88	47.343	ENSDARG00000102411	CR847850.1	94	46.122
ENSDARG00000078159	zgc:175284	99	59.130	ENSDARG00000094343	si:dkey-20i20.8	80	59.406
ENSDARG00000078159	zgc:175284	85	52.299	ENSDARG00000115737	AL954741.2	99	47.761
ENSDARG00000078159	zgc:175284	89	52.041	ENSDARG00000110710	CU210890.1	96	52.041
ENSDARG00000078159	zgc:175284	88	49.275	ENSDARG00000102401	znf1001	98	49.045
ENSDARG00000078159	zgc:175284	100	59.259	ENSDARG00000088507	znf982	98	54.545
ENSDARG00000078159	zgc:175284	100	70.085	ENSDARG00000099618	si:dkey-1b17.6	89	70.085
ENSDARG00000078159	zgc:175284	97	57.377	ENSDARG00000100803	zgc:173517	100	45.028
ENSDARG00000078159	zgc:175284	100	51.587	ENSDARG00000071725	znf1167	99	51.587
ENSDARG00000078159	zgc:175284	100	57.143	ENSDARG00000104065	znf1154	99	48.104
ENSDARG00000078159	zgc:175284	100	56.345	ENSDARG00000014775	zgc:113220	100	56.345
ENSDARG00000078159	zgc:175284	98	55.738	ENSDARG00000103954	znf1152	97	55.738
ENSDARG00000078159	zgc:175284	90	58.036	ENSDARG00000073821	znf1177	88	51.181
ENSDARG00000078159	zgc:175284	98	49.412	ENSDARG00000099890	CU207221.2	99	49.412
ENSDARG00000078159	zgc:175284	100	56.863	ENSDARG00000115326	znf1002	90	54.762
ENSDARG00000078159	zgc:175284	100	55.294	ENSDARG00000093378	si:ch211-235i11.5	99	44.444
ENSDARG00000078159	zgc:175284	88	50.226	ENSDARG00000100915	si:ch211-255f4.7	99	50.226
ENSDARG00000078159	zgc:175284	100	59.406	ENSDARG00000092246	si:dkey-20i20.3	84	51.515
ENSDARG00000078159	zgc:175284	100	50.570	ENSDARG00000094309	si:ch73-92e7.6	100	56.028
ENSDARG00000078159	zgc:175284	100	51.969	ENSDARG00000100882	znf1154	91	48.734
ENSDARG00000078159	zgc:175284	100	56.410	ENSDARG00000079760	zgc:112998	97	47.619
ENSDARG00000078159	zgc:175284	100	58.537	ENSDARG00000103827	znf1144	98	59.259
ENSDARG00000078159	zgc:175284	97	38.571	ENSDARG00000102959	zgc:171220	99	38.483
ENSDARG00000078159	zgc:175284	100	57.534	ENSDARG00000100544	zgc:173486	100	57.534
ENSDARG00000078159	zgc:175284	100	55.118	ENSDARG00000100361	znf1174	89	55.118
ENSDARG00000078159	zgc:175284	100	69.536	ENSDARG00000093875	zgc:174224	79	66.887
ENSDARG00000078159	zgc:175284	90	44.134	ENSDARG00000101562	znf1014	88	43.767
ENSDARG00000078159	zgc:175284	92	45.312	ENSDARG00000091679	FO704858.1	97	46.369
ENSDARG00000078159	zgc:175284	99	49.787	ENSDARG00000078281	zgc:173575	100	45.390
ENSDARG00000078159	zgc:175284	97	41.729	ENSDARG00000098248	CABZ01081730.1	85	45.028
ENSDARG00000078159	zgc:175284	100	52.362	ENSDARG00000098613	si:dkey-15h8.16	90	46.541
ENSDARG00000078159	zgc:175284	100	62.791	ENSDARG00000116814	CU570894.2	99	62.791
ENSDARG00000078159	zgc:175284	88	48.209	ENSDARG00000077712	zgc:113886	99	47.778
ENSDARG00000078159	zgc:175284	98	48.188	ENSDARG00000098021	si:dkey-111k8.2	99	44.262
ENSDARG00000078159	zgc:175284	100	50.000	ENSDARG00000101885	si:dkey-20i20.11	99	53.846
ENSDARG00000078159	zgc:175284	100	49.213	ENSDARG00000101694	znf1184	82	46.618
ENSDARG00000078159	zgc:175284	100	56.436	ENSDARG00000093562	si:dkey-20i20.7	86	56.034
ENSDARG00000078159	zgc:175284	93	49.444	ENSDARG00000108441	CU570894.1	100	48.889
ENSDARG00000078159	zgc:175284	99	47.222	ENSDARG00000095455	si:dkey-20i20.10	96	53.571
ENSDARG00000078159	zgc:175284	92	65.217	ENSDARG00000113666	znf1173	81	65.217
ENSDARG00000078159	zgc:175284	89	44.928	ENSDARG00000099731	CABZ01066719.1	96	44.898
ENSDARG00000078159	zgc:175284	100	53.917	ENSDARG00000102053	znf1164	100	71.186
ENSDARG00000078159	zgc:175284	89	44.958	ENSDARG00000099917	znf1005	95	46.176
ENSDARG00000078159	zgc:175284	100	52.756	ENSDARG00000071790	znf1153	90	44.803
ENSDARG00000078159	zgc:175284	84	78.947	ENSDARG00000094736	znf1157	100	78.947
ENSDARG00000078159	zgc:175284	100	48.819	ENSDARG00000102678	znf1181	89	46.021
ENSDARG00000078159	zgc:175284	100	60.784	ENSDARG00000071714	znf983	99	55.422
ENSDARG00000078159	zgc:175284	99	48.276	ENSDARG00000097521	si:dkey-111k8.5	100	44.536
ENSDARG00000078159	zgc:175284	98	40.909	ENSDARG00000101093	zgc:162971	98	41.088
ENSDARG00000078159	zgc:175284	94	56.410	ENSDARG00000102282	CABZ01063298.1	89	47.619
ENSDARG00000078159	zgc:175284	100	53.937	ENSDARG00000111899	zgc:171435	89	53.937

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000078159	zgc:175284	86	43.216	ENSACIG00000007882	-	78	43.216	Amphilophus_citrinellus
ENSDARG00000078159	zgc:175284	98	49.143	ENSACIG00000000360	si:ch211-241b2.1	96	49.143	Amphilophus_citrinellus
ENSDARG00000078159	zgc:175284	85	53.472	ENSAMXG00000043291	-	63	53.472	Astyanax_mexicanus
ENSDARG00000078159	zgc:175284	93	33.491	FBgn0037877	CG6689	55	33.491	Drosophila_melanogaster
ENSDARG00000078159	zgc:175284	88	39.266	ENSEBUG00000015073	-	82	40.288	Eptatretus_burgeri
ENSDARG00000078159	zgc:175284	86	47.162	ENSFHEG00000018209	-	72	46.383	Fundulus_heteroclitus
ENSDARG00000078159	zgc:175284	78	45.455	ENSHBUG00000009953	-	59	43.590	Haplochromis_burtoni
ENSDARG00000078159	zgc:175284	86	50.909	ENSHBUG00000018916	-	61	49.145	Haplochromis_burtoni
ENSDARG00000078159	zgc:175284	98	47.742	ENSMZEG00005027943	-	94	44.538	Maylandia_zebra
ENSDARG00000078159	zgc:175284	89	43.662	ENSMZEG00005005162	-	81	43.662	Maylandia_zebra
ENSDARG00000078159	zgc:175284	94	45.270	ENSMZEG00005025729	-	98	45.270	Maylandia_zebra
ENSDARG00000078159	zgc:175284	84	38.384	ENSMALG00000008638	-	60	38.384	Monopterus_albus
ENSDARG00000078159	zgc:175284	85	47.059	ENSORLG00020019341	-	75	75.758	Oryzias_latipes_hni
ENSDARG00000078159	zgc:175284	85	47.170	ENSPKIG00000020324	-	51	47.170	Paramormyrops_kingsleyae
ENSDARG00000078159	zgc:175284	93	40.881	ENSPKIG00000018633	-	60	40.881	Paramormyrops_kingsleyae
ENSDARG00000078159	zgc:175284	86	46.087	ENSPFOG00000001144	-	100	41.923	Poecilia_formosa
ENSDARG00000078159	zgc:175284	86	42.797	ENSPFOG00000011766	-	98	42.797	Poecilia_formosa
ENSDARG00000078159	zgc:175284	95	45.106	ENSPLAG00000016561	zgc:113348	71	43.119	Poecilia_latipinna
ENSDARG00000078159	zgc:175284	91	43.038	ENSPREG00000005538	-	80	34.663	Poecilia_reticulata
ENSDARG00000078159	zgc:175284	86	40.909	ENSPREG00000014105	-	77	38.806	Poecilia_reticulata
ENSDARG00000078159	zgc:175284	90	41.573	ENSSPAG00000009426	-	67	35.165	Stegastes_partitus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0008150	biological_process	-	ND	Process
GO:0046872	metal ion binding	-	IEA	Function