EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000078401 (Gene tree)
Gene ID: 100332095
Gene Symbol: larp4aa
Alias: larp4a|si:ch211-156j22.2
Full Name: La ribonucleoprotein domain family%2C member 4Aa
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 36223 bases
Position: chr23:27511709-27547931
Accession: ZDB-GENE-090313-50
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000119719	La	PF05383.17	2.1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000135023	-	618	-	ENSDARP00000122135	206 (aa)	-	F1QX31
ENSDART00000144419	-	2782	XM_002666492	ENSDARP00000119719	787 (aa)	XP_002666538	E9QDP4

Gene Model

Click here to download ENSDARG00000078401's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000078401's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000078401	larp4aa	95	52.258	ENSDARG00000074979	larp4ab	86	83.660
ENSDARG00000078401	larp4aa	90	36.104	ENSDARG00000062146	larp4b	59	42.266

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000078401	larp4aa	86	60.219	ENSG00000161813	LARP4	99	60.662	Homo_sapiens
ENSDARG00000078401	larp4aa	100	65.517	ENSAPOG00000007142	larp4aa	100	65.845	Acanthochromis_polyacanthus
ENSDARG00000078401	larp4aa	95	53.488	ENSAPOG00000021331	larp4ab	100	52.461	Acanthochromis_polyacanthus
ENSDARG00000078401	larp4aa	95	48.387	ENSAMEG00000001275	LARP4	99	48.267	Ailuropoda_melanoleuca
ENSDARG00000078401	larp4aa	100	60.794	ENSACIG00000001198	larp4aa	86	88.387	Amphilophus_citrinellus
ENSDARG00000078401	larp4aa	100	65.153	ENSAOCG00000002408	larp4aa	100	65.560	Amphiprion_ocellaris
ENSDARG00000078401	larp4aa	95	53.024	ENSAOCG00000006387	larp4ab	100	51.809	Amphiprion_ocellaris
ENSDARG00000078401	larp4aa	100	64.670	ENSAPEG00000019058	larp4aa	100	65.074	Amphiprion_percula
ENSDARG00000078401	larp4aa	95	51.154	ENSATEG00000001018	larp4ab	100	50.192	Anabas_testudineus
ENSDARG00000078401	larp4aa	100	61.259	ENSATEG00000020715	larp4aa	100	62.056	Anabas_testudineus
ENSDARG00000078401	larp4aa	95	50.130	ENSACAG00000017133	LARP4	96	49.229	Anolis_carolinensis
ENSDARG00000078401	larp4aa	82	62.865	ENSANAG00000029342	LARP4	99	61.172	Aotus_nancymaae
ENSDARG00000078401	larp4aa	100	64.434	ENSACLG00000002575	larp4aa	100	64.390	Astatotilapia_calliptera
ENSDARG00000078401	larp4aa	100	78.837	ENSAMXG00000036493	larp4aa	100	79.455	Astyanax_mexicanus
ENSDARG00000078401	larp4aa	100	54.647	ENSAMXG00000001515	larp4ab	100	54.557	Astyanax_mexicanus
ENSDARG00000078401	larp4aa	82	62.169	ENSCJAG00000021131	LARP4	99	60.219	Callithrix_jacchus
ENSDARG00000078401	larp4aa	95	48.458	ENSCAFG00000008174	LARP4	99	48.342	Canis_familiaris
ENSDARG00000078401	larp4aa	89	59.655	ENSCAFG00020014554	LARP4	99	59.655	Canis_lupus_dingo
ENSDARG00000078401	larp4aa	95	47.716	ENSCHIG00000025965	LARP4	99	47.208	Capra_hircus
ENSDARG00000078401	larp4aa	91	55.911	ENSTSYG00000004342	LARP4	96	62.467	Carlito_syrichta
ENSDARG00000078401	larp4aa	94	38.553	ENSCAPG00000012942	LARP4	91	46.866	Cavia_aperea
ENSDARG00000078401	larp4aa	95	44.631	ENSCPOG00000020519	LARP4	99	44.684	Cavia_porcellus
ENSDARG00000078401	larp4aa	83	62.169	ENSCCAG00000024439	LARP4	99	60.000	Cebus_capucinus
ENSDARG00000078401	larp4aa	95	46.164	ENSCATG00000044528	LARP4	99	46.026	Cercocebus_atys
ENSDARG00000078401	larp4aa	95	47.876	ENSCLAG00000001829	LARP4	99	47.402	Chinchilla_lanigera
ENSDARG00000078401	larp4aa	97	49.749	ENSCPBG00000019407	LARP4	92	49.565	Chrysemys_picta_bellii
ENSDARG00000078401	larp4aa	86	60.662	ENSCANG00000029159	-	99	61.111	Colobus_angolensis_palliatus
ENSDARG00000078401	larp4aa	95	43.702	ENSCANG00000033097	-	83	54.647	Colobus_angolensis_palliatus
ENSDARG00000078401	larp4aa	95	48.508	ENSCGRG00001010818	Larp4	99	48.450	Cricetulus_griseus_chok1gshd
ENSDARG00000078401	larp4aa	95	48.505	ENSCGRG00000009382	Larp4	100	48.446	Cricetulus_griseus_crigri
ENSDARG00000078401	larp4aa	99	62.923	ENSCSEG00000001963	larp4aa	99	63.659	Cynoglossus_semilaevis
ENSDARG00000078401	larp4aa	57	56.954	ENSCSEG00000003240	larp4ab	94	47.001	Cynoglossus_semilaevis
ENSDARG00000078401	larp4aa	100	62.999	ENSCVAG00000005488	larp4aa	100	63.450	Cyprinodon_variegatus
ENSDARG00000078401	larp4aa	95	47.871	ENSDNOG00000038525	LARP4	99	47.362	Dasypus_novemcinctus
ENSDARG00000078401	larp4aa	95	45.058	ENSDORG00000004013	Larp4	99	45.293	Dipodomys_ordii
ENSDARG00000078401	larp4aa	53	88.889	ENSETEG00000011683	LARP4	54	88.889	Echinops_telfairi
ENSDARG00000078401	larp4aa	65	40.787	ENSEBUG00000004426	LARP4	89	40.179	Eptatretus_burgeri
ENSDARG00000078401	larp4aa	69	39.896	ENSEBUG00000010394	LARP4	66	55.762	Eptatretus_burgeri
ENSDARG00000078401	larp4aa	82	59.414	ENSEASG00005004356	LARP4	100	59.414	Equus_asinus_asinus
ENSDARG00000078401	larp4aa	95	48.325	ENSECAG00000012479	LARP4	100	49.309	Equus_caballus
ENSDARG00000078401	larp4aa	69	87.179	ENSEEUG00000000316	LARP4	69	87.179	Erinaceus_europaeus
ENSDARG00000078401	larp4aa	100	54.940	ENSELUG00000000395	larp4aa	86	84.426	Esox_lucius
ENSDARG00000078401	larp4aa	95	53.956	ENSELUG00000018650	larp4ab	84	82.096	Esox_lucius
ENSDARG00000078401	larp4aa	88	59.375	ENSFCAG00000031897	LARP4	96	62.698	Felis_catus
ENSDARG00000078401	larp4aa	80	51.173	ENSFALG00000002114	LARP4	96	50.359	Ficedula_albicollis
ENSDARG00000078401	larp4aa	95	48.153	ENSFDAG00000006406	-	99	47.970	Fukomys_damarensis
ENSDARG00000078401	larp4aa	95	46.855	ENSFHEG00000013854	larp4ab	99	46.523	Fundulus_heteroclitus
ENSDARG00000078401	larp4aa	100	61.967	ENSFHEG00000004338	larp4aa	100	61.722	Fundulus_heteroclitus
ENSDARG00000078401	larp4aa	100	61.327	ENSGMOG00000008246	larp4aa	100	60.250	Gadus_morhua
ENSDARG00000078401	larp4aa	91	47.632	ENSGALG00000042122	LARP4	50	65.455	Gallus_gallus
ENSDARG00000078401	larp4aa	95	48.320	ENSGAFG00000021777	larp4ab	99	48.383	Gambusia_affinis
ENSDARG00000078401	larp4aa	100	62.963	ENSGACG00000008381	larp4aa	98	76.567	Gasterosteus_aculeatus
ENSDARG00000078401	larp4aa	95	50.000	ENSGACG00000000680	larp4ab	99	50.345	Gasterosteus_aculeatus
ENSDARG00000078401	larp4aa	95	49.166	ENSGAGG00000006969	LARP4	99	49.231	Gopherus_agassizii
ENSDARG00000078401	larp4aa	95	46.718	ENSGGOG00000015230	LARP4	99	60.219	Gorilla_gorilla
ENSDARG00000078401	larp4aa	100	64.434	ENSHBUG00000023074	larp4aa	100	64.390	Haplochromis_burtoni
ENSDARG00000078401	larp4aa	86	48.784	ENSHGLG00000005513	-	98	48.641	Heterocephalus_glaber_female
ENSDARG00000078401	larp4aa	80	49.842	ENSHGLG00000013875	-	95	48.903	Heterocephalus_glaber_female
ENSDARG00000078401	larp4aa	95	45.964	ENSHGLG00100011678	-	99	45.078	Heterocephalus_glaber_male
ENSDARG00000078401	larp4aa	95	47.301	ENSHGLG00100016984	-	99	47.429	Heterocephalus_glaber_male
ENSDARG00000078401	larp4aa	100	63.300	ENSHCOG00000015951	larp4aa	100	62.562	Hippocampus_comes
ENSDARG00000078401	larp4aa	95	47.938	ENSHCOG00000020857	larp4ab	100	47.044	Hippocampus_comes
ENSDARG00000078401	larp4aa	100	73.159	ENSIPUG00000007514	larp4aa	100	73.408	Ictalurus_punctatus
ENSDARG00000078401	larp4aa	95	49.673	ENSIPUG00000021659	larp4ab	99	49.211	Ictalurus_punctatus
ENSDARG00000078401	larp4aa	95	48.267	ENSSTOG00000003553	LARP4	99	48.000	Ictidomys_tridecemlineatus
ENSDARG00000078401	larp4aa	95	50.000	ENSKMAG00000018556	larp4ab	100	50.000	Kryptolebias_marmoratus
ENSDARG00000078401	larp4aa	100	62.347	ENSKMAG00000006800	larp4aa	100	62.546	Kryptolebias_marmoratus
ENSDARG00000078401	larp4aa	97	63.782	ENSLBEG00000014537	larp4aa	100	62.827	Labrus_bergylta
ENSDARG00000078401	larp4aa	95	50.576	ENSLBEG00000019306	larp4ab	100	50.127	Labrus_bergylta
ENSDARG00000078401	larp4aa	99	50.477	ENSLACG00000019090	LARP4	99	51.106	Latimeria_chalumnae
ENSDARG00000078401	larp4aa	100	61.369	ENSLOCG00000007113	larp4ab	100	62.637	Lepisosteus_oculatus
ENSDARG00000078401	larp4aa	95	47.558	ENSLAFG00000005160	LARP4	100	47.059	Loxodonta_africana
ENSDARG00000078401	larp4aa	82	62.698	ENSMFAG00000043681	LARP4	99	61.397	Macaca_fascicularis
ENSDARG00000078401	larp4aa	82	62.698	ENSMMUG00000008172	LARP4	99	61.397	Macaca_mulatta
ENSDARG00000078401	larp4aa	76	56.494	ENSMNEG00000037799	-	74	78.571	Macaca_nemestrina
ENSDARG00000078401	larp4aa	94	46.649	ENSMNEG00000034602	LARP4	98	46.265	Macaca_nemestrina
ENSDARG00000078401	larp4aa	86	60.949	ENSMLEG00000039661	LARP4	99	61.397	Mandrillus_leucophaeus
ENSDARG00000078401	larp4aa	100	64.000	ENSMAMG00000011206	larp4aa	100	63.329	Mastacembelus_armatus
ENSDARG00000078401	larp4aa	95	51.157	ENSMAMG00000002616	larp4ab	100	50.641	Mastacembelus_armatus
ENSDARG00000078401	larp4aa	100	64.434	ENSMZEG00005001813	larp4aa	100	64.390	Maylandia_zebra
ENSDARG00000078401	larp4aa	95	44.993	ENSMICG00000030156	-	66	83.459	Microcebus_murinus
ENSDARG00000078401	larp4aa	74	83.851	ENSMICG00000012388	-	97	83.851	Microcebus_murinus
ENSDARG00000078401	larp4aa	95	48.087	ENSMOCG00000020635	Larp4	99	47.516	Microtus_ochrogaster
ENSDARG00000078401	larp4aa	95	48.079	ENSMMOG00000021861	larp4ab	99	58.005	Mola_mola
ENSDARG00000078401	larp4aa	100	60.988	ENSMMOG00000004785	larp4aa	100	61.302	Mola_mola
ENSDARG00000078401	larp4aa	75	58.225	MGP_CAROLIEiJ_G0020281	Larp4	81	64.174	Mus_caroli
ENSDARG00000078401	larp4aa	95	48.302	ENSMUSG00000023025	Larp4	99	49.180	Mus_musculus
ENSDARG00000078401	larp4aa	95	47.296	MGP_PahariEiJ_G0020284	Larp4	99	48.172	Mus_pahari
ENSDARG00000078401	larp4aa	95	48.379	ENSMPUG00000008706	LARP4	96	48.462	Mustela_putorius_furo
ENSDARG00000078401	larp4aa	95	48.645	ENSMLUG00000012513	-	99	48.077	Myotis_lucifugus
ENSDARG00000078401	larp4aa	100	64.799	ENSNBRG00000011292	larp4aa	100	64.634	Neolamprologus_brichardi
ENSDARG00000078401	larp4aa	86	60.949	ENSNLEG00000017798	LARP4	99	61.397	Nomascus_leucogenys
ENSDARG00000078401	larp4aa	95	47.748	ENSODEG00000009770	LARP4	56	60.671	Octodon_degus
ENSDARG00000078401	larp4aa	95	48.834	ENSONIG00000019124	larp4ab	99	48.645	Oreochromis_niloticus
ENSDARG00000078401	larp4aa	100	63.415	ENSONIG00000011895	larp4aa	100	63.035	Oreochromis_niloticus
ENSDARG00000078401	larp4aa	66	54.545	ENSOANG00000004373	LARP4	93	55.056	Ornithorhynchus_anatinus
ENSDARG00000078401	larp4aa	95	48.520	ENSOCUG00000026872	-	99	49.040	Oryctolagus_cuniculus
ENSDARG00000078401	larp4aa	95	49.288	ENSOCUG00000021417	-	99	48.590	Oryctolagus_cuniculus
ENSDARG00000078401	larp4aa	100	62.945	ENSORLG00000006758	larp4aa	100	62.639	Oryzias_latipes
ENSDARG00000078401	larp4aa	100	62.822	ENSORLG00020010258	larp4aa	100	62.931	Oryzias_latipes_hni
ENSDARG00000078401	larp4aa	100	62.577	ENSORLG00015002292	larp4aa	100	62.685	Oryzias_latipes_hsok
ENSDARG00000078401	larp4aa	100	61.663	ENSOMEG00000019749	larp4aa	96	73.596	Oryzias_melastigma
ENSDARG00000078401	larp4aa	65	51.661	ENSOGAG00000001415	LARP4	99	52.757	Otolemur_garnettii
ENSDARG00000078401	larp4aa	95	47.529	ENSOARG00000017702	LARP4	99	47.402	Ovis_aries
ENSDARG00000078401	larp4aa	71	59.518	ENSPPAG00000035100	LARP4	85	62.269	Pan_paniscus
ENSDARG00000078401	larp4aa	88	59.375	ENSPPRG00000004522	LARP4	96	62.698	Panthera_pardus
ENSDARG00000078401	larp4aa	88	59.375	ENSPTIG00000015617	LARP4	96	62.698	Panthera_tigris_altaica
ENSDARG00000078401	larp4aa	86	61.397	ENSPTRG00000004935	LARP4	99	61.397	Pan_troglodytes
ENSDARG00000078401	larp4aa	86	60.949	ENSPANG00000022964	LARP4	99	61.397	Papio_anubis
ENSDARG00000078401	larp4aa	100	60.990	ENSPKIG00000005950	larp4ab	100	60.650	Paramormyrops_kingsleyae
ENSDARG00000078401	larp4aa	95	47.911	ENSPEMG00000018433	Larp4	99	47.396	Peromyscus_maniculatus_bairdii
ENSDARG00000078401	larp4aa	69	42.039	ENSPMAG00000002788	LARP4	98	42.226	Petromyzon_marinus
ENSDARG00000078401	larp4aa	96	50.388	ENSPCIG00000000384	LARP4	99	50.130	Phascolarctos_cinereus
ENSDARG00000078401	larp4aa	100	63.305	ENSPFOG00000013148	larp4aa	100	63.062	Poecilia_formosa
ENSDARG00000078401	larp4aa	95	48.695	ENSPFOG00000009764	larp4ab	99	48.512	Poecilia_formosa
ENSDARG00000078401	larp4aa	95	48.956	ENSPLAG00000008502	larp4ab	99	48.889	Poecilia_latipinna
ENSDARG00000078401	larp4aa	100	61.604	ENSPLAG00000013626	larp4aa	100	61.361	Poecilia_latipinna
ENSDARG00000078401	larp4aa	95	47.655	ENSPMEG00000002720	larp4ab	99	48.708	Poecilia_mexicana
ENSDARG00000078401	larp4aa	100	63.183	ENSPMEG00000014271	larp4aa	100	63.062	Poecilia_mexicana
ENSDARG00000078401	larp4aa	100	62.090	ENSPREG00000022597	larp4aa	100	61.876	Poecilia_reticulata
ENSDARG00000078401	larp4aa	65	52.355	ENSPPYG00000004512	-	99	54.713	Pongo_abelii
ENSDARG00000078401	larp4aa	82	46.809	ENSPCAG00000003671	LARP4	71	79.646	Procavia_capensis
ENSDARG00000078401	larp4aa	82	63.032	ENSPCOG00000026291	LARP4	96	62.730	Propithecus_coquereli
ENSDARG00000078401	larp4aa	89	42.340	ENSPVAG00000016840	LARP4	90	41.931	Pteropus_vampyrus
ENSDARG00000078401	larp4aa	100	64.434	ENSPNYG00000022265	larp4aa	100	64.390	Pundamilia_nyererei
ENSDARG00000078401	larp4aa	96	77.191	ENSPNAG00000024770	larp4aa	100	78.479	Pygocentrus_nattereri
ENSDARG00000078401	larp4aa	100	55.296	ENSPNAG00000014478	larp4ab	100	54.747	Pygocentrus_nattereri
ENSDARG00000078401	larp4aa	91	49.492	ENSRBIG00000036890	-	99	49.492	Rhinopithecus_bieti
ENSDARG00000078401	larp4aa	82	53.211	ENSRBIG00000038857	-	92	60.949	Rhinopithecus_bieti
ENSDARG00000078401	larp4aa	86	60.949	ENSRROG00000042764	-	99	60.949	Rhinopithecus_roxellana
ENSDARG00000078401	larp4aa	91	49.492	ENSRROG00000025487	-	99	49.492	Rhinopithecus_roxellana
ENSDARG00000078401	larp4aa	82	61.111	ENSSBOG00000026650	LARP4	99	58.759	Saimiri_boliviensis_boliviensis
ENSDARG00000078401	larp4aa	100	64.500	ENSSFOG00015014096	larp4ab	100	64.375	Scleropages_formosus
ENSDARG00000078401	larp4aa	95	63.979	ENSSFOG00015003868	larp4aa	99	63.178	Scleropages_formosus
ENSDARG00000078401	larp4aa	100	64.303	ENSSMAG00000019473	larp4aa	100	63.647	Scophthalmus_maximus
ENSDARG00000078401	larp4aa	95	51.658	ENSSMAG00000002838	larp4ab	100	52.357	Scophthalmus_maximus
ENSDARG00000078401	larp4aa	95	51.407	ENSSDUG00000006655	larp4ab	100	50.771	Seriola_dumerili
ENSDARG00000078401	larp4aa	100	62.802	ENSSDUG00000010621	larp4aa	100	64.338	Seriola_dumerili
ENSDARG00000078401	larp4aa	95	52.308	ENSSLDG00000001791	larp4ab	100	51.918	Seriola_lalandi_dorsalis
ENSDARG00000078401	larp4aa	100	62.636	ENSSLDG00000004942	larp4aa	100	63.480	Seriola_lalandi_dorsalis
ENSDARG00000078401	larp4aa	84	51.957	ENSSARG00000012469	LARP4	89	51.957	Sorex_araneus
ENSDARG00000078401	larp4aa	90	48.985	ENSSPUG00000016552	LARP4	93	49.458	Sphenodon_punctatus
ENSDARG00000078401	larp4aa	87	73.274	ENSSPAG00000007222	larp4aa	98	72.452	Stegastes_partitus
ENSDARG00000078401	larp4aa	95	52.774	ENSSPAG00000002172	larp4ab	100	50.447	Stegastes_partitus
ENSDARG00000078401	larp4aa	95	46.632	ENSSSCG00000028516	LARP4	99	46.855	Sus_scrofa
ENSDARG00000078401	larp4aa	65	54.598	ENSTRUG00000007206	larp4ab	100	48.240	Takifugu_rubripes
ENSDARG00000078401	larp4aa	96	59.898	ENSTNIG00000015109	larp4aa	99	60.897	Tetraodon_nigroviridis
ENSDARG00000078401	larp4aa	95	46.859	ENSTNIG00000014571	larp4ab	100	46.026	Tetraodon_nigroviridis
ENSDARG00000078401	larp4aa	95	41.473	ENSTBEG00000005167	LARP4	82	53.529	Tupaia_belangeri
ENSDARG00000078401	larp4aa	95	47.516	ENSTTRG00000003764	LARP4	99	46.879	Tursiops_truncatus
ENSDARG00000078401	larp4aa	65	54.307	ENSUAMG00000013764	LARP4	97	54.664	Ursus_americanus
ENSDARG00000078401	larp4aa	95	48.840	ENSUMAG00000008473	LARP4	99	48.718	Ursus_maritimus
ENSDARG00000078401	larp4aa	95	46.895	ENSVPAG00000010136	LARP4	99	46.641	Vicugna_pacos
ENSDARG00000078401	larp4aa	89	58.276	ENSVVUG00000024717	LARP4	99	57.288	Vulpes_vulpes
ENSDARG00000078401	larp4aa	87	51.293	ENSXETG00000007283	larp4	95	51.149	Xenopus_tropicalis
ENSDARG00000078401	larp4aa	100	61.747	ENSXCOG00000006387	larp4aa	100	61.652	Xiphophorus_couchianus
ENSDARG00000078401	larp4aa	95	49.157	ENSXMAG00000002156	larp4ab	99	49.091	Xiphophorus_maculatus
ENSDARG00000078401	larp4aa	100	63.548	ENSXMAG00000010519	larp4aa	100	63.183	Xiphophorus_maculatus