EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000078814 (Gene tree)
Gene ID: 100005466
Gene Symbol: si:dkey-34m19.3
Alias: fb99f06|wu:fb99f06
Full Name: si:dkey-34m19.3
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 14121 bases
Position: chr6:10700996-10715116
Accession: ZDB-GENE-030131-2206
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000137465	zf-C2H2	PF00096.26	7.3e-43	1	8
ENSDARP00000137465	zf-C2H2	PF00096.26	7.3e-43	2	8
ENSDARP00000137465	zf-C2H2	PF00096.26	7.3e-43	3	8
ENSDARP00000137465	zf-C2H2	PF00096.26	7.3e-43	4	8
ENSDARP00000137465	zf-C2H2	PF00096.26	7.3e-43	5	8
ENSDARP00000137465	zf-C2H2	PF00096.26	7.3e-43	6	8
ENSDARP00000137465	zf-C2H2	PF00096.26	7.3e-43	7	8
ENSDARP00000137465	zf-C2H2	PF00096.26	7.3e-43	8	8
ENSDARP00000125956	zf-C2H2	PF00096.26	8.4e-40	1	6
ENSDARP00000125956	zf-C2H2	PF00096.26	8.4e-40	2	6
ENSDARP00000125956	zf-C2H2	PF00096.26	8.4e-40	3	6
ENSDARP00000125956	zf-C2H2	PF00096.26	8.4e-40	4	6
ENSDARP00000125956	zf-C2H2	PF00096.26	8.4e-40	5	6
ENSDARP00000125956	zf-C2H2	PF00096.26	8.4e-40	6	6
ENSDARP00000099658	zf-C2H2	PF00096.26	8.5e-40	1	6
ENSDARP00000099658	zf-C2H2	PF00096.26	8.5e-40	2	6
ENSDARP00000099658	zf-C2H2	PF00096.26	8.5e-40	3	6
ENSDARP00000099658	zf-C2H2	PF00096.26	8.5e-40	4	6
ENSDARP00000099658	zf-C2H2	PF00096.26	8.5e-40	5	6
ENSDARP00000099658	zf-C2H2	PF00096.26	8.5e-40	6	6
ENSDARP00000137465	zf-met	PF12874.7	7.1e-07	1	1
ENSDARP00000125956	zf-met	PF12874.7	0.00058	1	1
ENSDARP00000099658	zf-met	PF12874.7	0.00059	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000157704	-	2159	-	ENSDARP00000137465	290 (aa)	-	A0A0R4IQ54
ENSDART00000108656	-	2040	XM_002662300	ENSDARP00000099658	619 (aa)	XP_002662346	F1R8F3
ENSDART00000151488	-	2142	-	ENSDARP00000125956	618 (aa)	-	I3ISR5

Gene Model

Click here to download ENSDARG00000078814's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000078814's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000078814	si:dkey-34m19.3	76	56.886	ENSDARG00000111614	znf1183	83	56.886
ENSDARG00000078814	si:dkey-34m19.3	79	56.637	ENSDARG00000098923	zgc:173577	94	56.637
ENSDARG00000078814	si:dkey-34m19.3	75	59.140	ENSDARG00000116814	CU570894.2	99	48.438
ENSDARG00000078814	si:dkey-34m19.3	77	53.081	ENSDARG00000073821	znf1177	77	53.081
ENSDARG00000078814	si:dkey-34m19.3	95	52.062	ENSDARG00000093378	si:ch211-235i11.5	97	57.384
ENSDARG00000078814	si:dkey-34m19.3	81	65.072	ENSDARG00000101044	si:ch73-138e16.6	87	65.072
ENSDARG00000078814	si:dkey-34m19.3	77	57.576	ENSDARG00000111899	zgc:171435	69	57.576
ENSDARG00000078814	si:dkey-34m19.3	95	52.062	ENSDARG00000100587	zgc:113886	93	57.384
ENSDARG00000078814	si:dkey-34m19.3	86	54.425	ENSDARG00000099618	si:dkey-1b17.6	74	52.174
ENSDARG00000078814	si:dkey-34m19.3	76	61.500	ENSDARG00000103777	znf1001	98	61.500
ENSDARG00000078814	si:dkey-34m19.3	76	54.795	ENSDARG00000100361	znf1174	72	54.795
ENSDARG00000078814	si:dkey-34m19.3	99	55.455	ENSDARG00000088507	znf982	97	53.012
ENSDARG00000078814	si:dkey-34m19.3	82	61.135	ENSDARG00000099890	CU207221.2	99	61.135
ENSDARG00000078814	si:dkey-34m19.3	80	57.965	ENSDARG00000103530	zgc:113102	94	57.965
ENSDARG00000078814	si:dkey-34m19.3	94	56.275	ENSDARG00000100803	zgc:173517	100	60.274
ENSDARG00000078814	si:dkey-34m19.3	83	56.846	ENSDARG00000105074	BX000701.2	95	56.846
ENSDARG00000078814	si:dkey-34m19.3	77	58.986	ENSDARG00000092605	znf1003	67	58.986
ENSDARG00000078814	si:dkey-34m19.3	94	50.685	ENSDARG00000053165	zgc:113377	95	52.525
ENSDARG00000078814	si:dkey-34m19.3	93	53.846	ENSDARG00000099172	BX000701.1	95	53.846
ENSDARG00000078814	si:dkey-34m19.3	75	60.109	ENSDARG00000103827	znf1144	98	77.647
ENSDARG00000078814	si:dkey-34m19.3	82	56.175	ENSDARG00000109703	FO834825.1	82	60.538
ENSDARG00000078814	si:dkey-34m19.3	76	61.644	ENSDARG00000090740	zmp:0000001003	91	61.644
ENSDARG00000078814	si:dkey-34m19.3	78	58.590	ENSDARG00000102411	CR847850.1	94	58.590
ENSDARG00000078814	si:dkey-34m19.3	79	51.012	ENSDARG00000104065	znf1154	89	56.164
ENSDARG00000078814	si:dkey-34m19.3	81	63.677	ENSDARG00000077712	zgc:113886	99	63.677
ENSDARG00000078814	si:dkey-34m19.3	80	57.511	ENSDARG00000106565	CABZ01066720.1	90	57.511
ENSDARG00000078814	si:dkey-34m19.3	78	60.177	ENSDARG00000113011	zgc:113102	85	60.177
ENSDARG00000078814	si:dkey-34m19.3	80	61.187	ENSDARG00000099731	CABZ01066719.1	94	61.187
ENSDARG00000078814	si:dkey-34m19.3	76	59.633	ENSDARG00000098248	CABZ01081730.1	91	59.908

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000078814	si:dkey-34m19.3	81	46.012	ENSACIG00000007882	-	80	46.012	Amphilophus_citrinellus
ENSDARG00000078814	si:dkey-34m19.3	92	45.000	ENSACIG00000008886	znf1164	95	45.000	Amphilophus_citrinellus
ENSDARG00000078814	si:dkey-34m19.3	97	47.317	ENSATEG00000008683	si:ch211-241b2.1	89	47.525	Anabas_testudineus
ENSDARG00000078814	si:dkey-34m19.3	86	45.763	ENSATEG00000008667	-	50	45.763	Anabas_testudineus
ENSDARG00000078814	si:dkey-34m19.3	85	42.262	ENSACLG00000000521	-	93	46.809	Astatotilapia_calliptera
ENSDARG00000078814	si:dkey-34m19.3	79	41.921	ENSACLG00000017449	-	58	41.921	Astatotilapia_calliptera
ENSDARG00000078814	si:dkey-34m19.3	76	60.432	ENSAMXG00000041650	-	86	60.432	Astyanax_mexicanus
ENSDARG00000078814	si:dkey-34m19.3	77	50.581	ENSAMXG00000029660	-	50	50.581	Astyanax_mexicanus
ENSDARG00000078814	si:dkey-34m19.3	77	53.363	ENSAMXG00000043291	-	66	53.363	Astyanax_mexicanus
ENSDARG00000078814	si:dkey-34m19.3	76	40.000	ENSCSEG00000015585	-	71	40.476	Cynoglossus_semilaevis
ENSDARG00000078814	si:dkey-34m19.3	78	47.573	ENSEBUG00000015073	-	82	46.847	Eptatretus_burgeri
ENSDARG00000078814	si:dkey-34m19.3	83	46.907	ENSFHEG00000018209	-	72	46.907	Fundulus_heteroclitus
ENSDARG00000078814	si:dkey-34m19.3	76	52.535	ENSHBUG00000018916	-	87	52.535	Haplochromis_burtoni
ENSDARG00000078814	si:dkey-34m19.3	82	43.243	ENSHBUG00000009953	-	64	43.243	Haplochromis_burtoni
ENSDARG00000078814	si:dkey-34m19.3	84	43.636	ENSLBEG00000022939	-	58	43.636	Labrus_bergylta
ENSDARG00000078814	si:dkey-34m19.3	79	46.552	ENSMAMG00000014743	-	50	47.321	Mastacembelus_armatus
ENSDARG00000078814	si:dkey-34m19.3	89	49.045	ENSMZEG00005027943	-	93	47.368	Maylandia_zebra
ENSDARG00000078814	si:dkey-34m19.3	79	41.176	ENSMZEG00005005162	-	71	47.619	Maylandia_zebra
ENSDARG00000078814	si:dkey-34m19.3	84	46.860	ENSMZEG00005021426	-	83	46.860	Maylandia_zebra
ENSDARG00000078814	si:dkey-34m19.3	86	51.031	ENSMZEG00005025729	-	87	51.031	Maylandia_zebra
ENSDARG00000078814	si:dkey-34m19.3	84	55.294	ENSMZEG00005026470	-	59	55.294	Maylandia_zebra
ENSDARG00000078814	si:dkey-34m19.3	76	42.174	ENSMZEG00005025568	-	78	42.174	Maylandia_zebra
ENSDARG00000078814	si:dkey-34m19.3	76	52.535	ENSMZEG00005007426	-	80	52.535	Maylandia_zebra
ENSDARG00000078814	si:dkey-34m19.3	77	40.088	ENSMZEG00005022161	-	78	40.088	Maylandia_zebra
ENSDARG00000078814	si:dkey-34m19.3	83	47.586	ENSONIG00000013908	-	100	47.586	Oreochromis_niloticus
ENSDARG00000078814	si:dkey-34m19.3	78	49.541	ENSORLG00020019341	-	77	63.889	Oryzias_latipes_hni
ENSDARG00000078814	si:dkey-34m19.3	78	42.188	ENSPKIG00000020324	-	54	41.104	Paramormyrops_kingsleyae
ENSDARG00000078814	si:dkey-34m19.3	76	42.105	ENSPMGG00000001558	znf1174	54	42.105	Periophthalmus_magnuspinnatus
ENSDARG00000078814	si:dkey-34m19.3	78	43.946	ENSPFOG00000011766	-	100	43.946	Poecilia_formosa
ENSDARG00000078814	si:dkey-34m19.3	93	51.269	ENSPLAG00000016561	zgc:113348	96	47.024	Poecilia_latipinna
ENSDARG00000078814	si:dkey-34m19.3	77	41.573	ENSPNYG00000024183	zgc:173577	98	41.573	Pundamilia_nyererei
ENSDARG00000078814	si:dkey-34m19.3	81	40.000	ENSSPAG00000009426	-	68	40.860	Stegastes_partitus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003677	DNA binding	-	IEA	Function
GO:0046872	metal ion binding	-	IEA	Function