EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000078835 (Gene tree)
Gene ID: 100149182
Gene Symbol: mrpl58
Alias: ict1|si:ch1073-357b18.5
Full Name: mitochondrial ribosomal protein L58
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 2482 bases
Position: chr12:47439-49920
Accession: ZDB-GENE-121214-202
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000102976	RF-1	PF00472.20	4.9e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000114732	-	654	-	ENSDARP00000102976	193 (aa)	-	E7F0D0

Gene Model

Click here to download ENSDARG00000078835's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000078835's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000078835	mrpl58	95	52.284	ENSAPOG00000001092	-	96	52.284	Acanthochromis_polyacanthus
ENSDARG00000078835	mrpl58	100	52.683	ENSAOCG00000017975	mrpl58	100	52.683	Amphiprion_ocellaris
ENSDARG00000078835	mrpl58	75	65.278	ENSATEG00000005139	mrpl58	76	65.278	Anabas_testudineus
ENSDARG00000078835	mrpl58	68	53.030	ENSAPLG00000006285	-	99	48.077	Anas_platyrhynchos
ENSDARG00000078835	mrpl58	76	63.699	ENSACLG00000023065	mrpl58	82	63.699	Astatotilapia_calliptera
ENSDARG00000078835	mrpl58	70	66.667	ENSAMXG00000034224	mrpl58	68	66.667	Astyanax_mexicanus
ENSDARG00000078835	mrpl58	68	38.060	WBGene00019838	R02F2.9	81	38.060	Caenorhabditis_elegans
ENSDARG00000078835	mrpl58	71	62.774	ENSELUG00000022498	mrpl58	87	62.406	Esox_lucius
ENSDARG00000078835	mrpl58	87	47.305	ENSFALG00000001244	-	86	47.305	Ficedula_albicollis
ENSDARG00000078835	mrpl58	83	60.248	ENSFHEG00000018330	mrpl58	81	60.248	Fundulus_heteroclitus
ENSDARG00000078835	mrpl58	76	63.699	ENSHBUG00000005924	mrpl58	82	63.699	Haplochromis_burtoni
ENSDARG00000078835	mrpl58	81	56.604	ENSHCOG00000018870	mrpl58	79	56.604	Hippocampus_comes
ENSDARG00000078835	mrpl58	89	59.538	ENSIPUG00000004625	mrpl58	86	59.538	Ictalurus_punctatus
ENSDARG00000078835	mrpl58	74	62.937	ENSKMAG00000000189	-	75	62.937	Kryptolebias_marmoratus
ENSDARG00000078835	mrpl58	81	56.688	ENSLBEG00000023210	mrpl58	81	56.688	Labrus_bergylta
ENSDARG00000078835	mrpl58	100	53.266	ENSMAMG00000002209	mrpl58	100	53.266	Mastacembelus_armatus
ENSDARG00000078835	mrpl58	76	63.699	ENSMZEG00005005403	mrpl58	75	63.699	Maylandia_zebra
ENSDARG00000078835	mrpl58	74	63.636	ENSONIG00000019597	mrpl58	73	63.636	Oreochromis_niloticus
ENSDARG00000078835	mrpl58	76	58.904	ENSORLG00000020755	mrpl58	79	58.904	Oryzias_latipes
ENSDARG00000078835	mrpl58	70	62.500	ENSORLG00020010282	mrpl58	74	62.500	Oryzias_latipes_hni
ENSDARG00000078835	mrpl58	75	59.722	ENSOMEG00000016576	mrpl58	79	59.722	Oryzias_melastigma
ENSDARG00000078835	mrpl58	69	63.433	ENSPMGG00000021529	mrpl58	89	63.433	Periophthalmus_magnuspinnatus
ENSDARG00000078835	mrpl58	70	66.667	ENSPNAG00000025708	mrpl58	67	66.667	Pygocentrus_nattereri
ENSDARG00000078835	mrpl58	74	64.336	ENSSDUG00000011564	mrpl58	75	64.336	Seriola_dumerili
ENSDARG00000078835	mrpl58	74	63.636	ENSSLDG00000001648	mrpl58	75	63.636	Seriola_lalandi_dorsalis
ENSDARG00000078835	mrpl58	74	66.434	ENSSPAG00000011315	mrpl58	73	66.434	Stegastes_partitus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003747	translation release factor activity	-	IEA	Function
GO:0005762	mitochondrial large ribosomal subunit	21873635.	IBA	Component
GO:0006415	translational termination	-	IEA	Process
GO:0070126	mitochondrial translational termination	21873635.	IBA	Process