EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000079055 (Gene tree)
Gene ID: 566303
Gene Symbol: si:dkey-85a20.4
Alias: -
Full Name: si:dkey-85a20.4
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 45695 bases
Position: chr13:39277178-39322872
Accession: ZDB-GENE-090313-347
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000118921	SpoU_methylase	PF00588.19	2e-31	1	1
ENSDARP00000099781	SpoU_methylase	PF00588.19	2.1e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000132198	-	1187	-	ENSDARP00000122225	396 (aa)	-	F1QVL0
ENSDART00000113259	-	4713	XM_001921839	ENSDARP00000099781	1570 (aa)	XP_001921874	F1R356
ENSDART00000133636	-	2061	-	ENSDARP00000118921	581 (aa)	-	F1Q8L2

Gene Model

Click here to download ENSDARG00000079055's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000079055's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000079055	si:dkey-85a20.4	99	54.152	ENSG00000059588	TARBP1	85	45.996	Homo_sapiens
ENSDARG00000079055	si:dkey-85a20.4	99	71.207	ENSAPOG00000016419	si:dkey-85a20.4	99	56.516	Acanthochromis_polyacanthus
ENSDARG00000079055	si:dkey-85a20.4	99	52.850	ENSAMEG00000003359	TARBP1	99	45.739	Ailuropoda_melanoleuca
ENSDARG00000079055	si:dkey-85a20.4	99	69.795	ENSATEG00000020266	si:dkey-85a20.4	99	56.473	Anabas_testudineus
ENSDARG00000079055	si:dkey-85a20.4	99	55.746	ENSAPLG00000007666	TARBP1	99	46.813	Anas_platyrhynchos
ENSDARG00000079055	si:dkey-85a20.4	98	51.123	ENSACAG00000001142	TARBP1	86	43.939	Anolis_carolinensis
ENSDARG00000079055	si:dkey-85a20.4	99	54.231	ENSANAG00000022031	TARBP1	87	44.982	Aotus_nancymaae
ENSDARG00000079055	si:dkey-85a20.4	99	53.368	ENSBTAG00000004517	TARBP1	98	52.096	Bos_taurus
ENSDARG00000079055	si:dkey-85a20.4	99	54.577	ENSCJAG00000018155	TARBP1	85	46.406	Callithrix_jacchus
ENSDARG00000079055	si:dkey-85a20.4	99	53.460	ENSCAFG00000011533	TARBP1	97	46.571	Canis_familiaris
ENSDARG00000079055	si:dkey-85a20.4	99	53.287	ENSCAFG00020027141	TARBP1	99	42.105	Canis_lupus_dingo
ENSDARG00000079055	si:dkey-85a20.4	99	52.641	ENSCHIG00000011437	TARBP1	99	41.860	Capra_hircus
ENSDARG00000079055	si:dkey-85a20.4	99	54.404	ENSTSYG00000010382	TARBP1	96	46.708	Carlito_syrichta
ENSDARG00000079055	si:dkey-85a20.4	99	51.483	ENSCAPG00000010831	TARBP1	99	43.444	Cavia_aperea
ENSDARG00000079055	si:dkey-85a20.4	99	55.190	ENSCPOG00000013995	TARBP1	86	45.971	Cavia_porcellus
ENSDARG00000079055	si:dkey-85a20.4	99	54.404	ENSCCAG00000037278	TARBP1	99	41.834	Cebus_capucinus
ENSDARG00000079055	si:dkey-85a20.4	99	54.844	ENSCATG00000011754	TARBP1	87	45.669	Cercocebus_atys
ENSDARG00000079055	si:dkey-85a20.4	99	54.844	ENSCLAG00000003655	TARBP1	95	46.682	Chinchilla_lanigera
ENSDARG00000079055	si:dkey-85a20.4	99	54.766	ENSCSAG00000010100	TARBP1	99	47.104	Chlorocebus_sabaeus
ENSDARG00000079055	si:dkey-85a20.4	83	52.041	ENSCPBG00000005587	TARBP1	98	40.678	Chrysemys_picta_bellii
ENSDARG00000079055	si:dkey-85a20.4	70	38.717	ENSCSAVG00000005745	-	98	38.717	Ciona_savignyi
ENSDARG00000079055	si:dkey-85a20.4	99	54.844	ENSCANG00000034343	TARBP1	99	46.199	Colobus_angolensis_palliatus
ENSDARG00000079055	si:dkey-85a20.4	99	55.403	ENSCGRG00001016690	Tarbp1	99	42.574	Cricetulus_griseus_chok1gshd
ENSDARG00000079055	si:dkey-85a20.4	99	55.403	ENSCGRG00000016893	Tarbp1	95	45.872	Cricetulus_griseus_crigri
ENSDARG00000079055	si:dkey-85a20.4	99	65.180	ENSCSEG00000005255	si:dkey-85a20.4	98	58.416	Cynoglossus_semilaevis
ENSDARG00000079055	si:dkey-85a20.4	99	53.873	ENSDNOG00000008637	TARBP1	86	43.953	Dasypus_novemcinctus
ENSDARG00000079055	si:dkey-85a20.4	99	56.597	ENSDORG00000007984	Tarbp1	99	47.135	Dipodomys_ordii
ENSDARG00000079055	si:dkey-85a20.4	99	54.059	ENSEASG00005000252	TARBP1	88	45.859	Equus_asinus_asinus
ENSDARG00000079055	si:dkey-85a20.4	99	53.886	ENSECAG00000023673	TARBP1	87	45.944	Equus_caballus
ENSDARG00000079055	si:dkey-85a20.4	97	70.224	ENSELUG00000012193	si:dkey-85a20.4	99	57.826	Esox_lucius
ENSDARG00000079055	si:dkey-85a20.4	98	53.391	ENSFCAG00000014183	TARBP1	86	44.128	Felis_catus
ENSDARG00000079055	si:dkey-85a20.4	98	54.655	ENSFALG00000013565	TARBP1	99	45.558	Ficedula_albicollis
ENSDARG00000079055	si:dkey-85a20.4	99	51.821	ENSFDAG00000001308	TARBP1	99	44.529	Fukomys_damarensis
ENSDARG00000079055	si:dkey-85a20.4	97	63.228	ENSFHEG00000007565	si:dkey-85a20.4	99	63.228	Fundulus_heteroclitus
ENSDARG00000079055	si:dkey-85a20.4	99	66.893	ENSGMOG00000004549	si:dkey-85a20.4	98	57.536	Gadus_morhua
ENSDARG00000079055	si:dkey-85a20.4	99	53.952	ENSGALG00000011000	TARBP1	99	44.320	Gallus_gallus
ENSDARG00000079055	si:dkey-85a20.4	99	69.257	ENSGAFG00000007387	si:dkey-85a20.4	99	54.461	Gambusia_affinis
ENSDARG00000079055	si:dkey-85a20.4	99	70.847	ENSGACG00000005865	si:dkey-85a20.4	98	59.233	Gasterosteus_aculeatus
ENSDARG00000079055	si:dkey-85a20.4	99	55.766	ENSGAGG00000012102	TARBP1	98	42.069	Gopherus_agassizii
ENSDARG00000079055	si:dkey-85a20.4	99	51.910	ENSGGOG00000022879	TARBP1	98	45.197	Gorilla_gorilla
ENSDARG00000079055	si:dkey-85a20.4	99	71.795	ENSHBUG00000008877	si:dkey-85a20.4	99	56.200	Haplochromis_burtoni
ENSDARG00000079055	si:dkey-85a20.4	99	54.844	ENSHGLG00000011592	TARBP1	87	44.922	Heterocephalus_glaber_female
ENSDARG00000079055	si:dkey-85a20.4	99	54.844	ENSHGLG00100015169	TARBP1	93	45.727	Heterocephalus_glaber_male
ENSDARG00000079055	si:dkey-85a20.4	97	72.887	ENSIPUG00000005249	si:dkey-85a20.4	98	59.913	Ictalurus_punctatus
ENSDARG00000079055	si:dkey-85a20.4	99	52.422	ENSSTOG00000032291	TARBP1	98	45.797	Ictidomys_tridecemlineatus
ENSDARG00000079055	si:dkey-85a20.4	99	54.059	ENSJJAG00000017840	Tarbp1	93	44.477	Jaculus_jaculus
ENSDARG00000079055	si:dkey-85a20.4	99	68.448	ENSKMAG00000017546	si:dkey-85a20.4	84	60.660	Kryptolebias_marmoratus
ENSDARG00000079055	si:dkey-85a20.4	99	70.568	ENSLBEG00000012132	si:dkey-85a20.4	86	65.527	Labrus_bergylta
ENSDARG00000079055	si:dkey-85a20.4	99	55.060	ENSLACG00000004337	TARBP1	99	42.294	Latimeria_chalumnae
ENSDARG00000079055	si:dkey-85a20.4	99	69.338	ENSLOCG00000016214	si:dkey-85a20.4	99	52.861	Lepisosteus_oculatus
ENSDARG00000079055	si:dkey-85a20.4	99	53.448	ENSLAFG00000011394	TARBP1	90	44.467	Loxodonta_africana
ENSDARG00000079055	si:dkey-85a20.4	99	54.498	ENSMFAG00000041068	TARBP1	99	41.176	Macaca_fascicularis
ENSDARG00000079055	si:dkey-85a20.4	99	54.498	ENSMMUG00000021703	TARBP1	87	44.075	Macaca_mulatta
ENSDARG00000079055	si:dkey-85a20.4	99	54.498	ENSMNEG00000045002	TARBP1	87	45.423	Macaca_nemestrina
ENSDARG00000079055	si:dkey-85a20.4	99	54.844	ENSMLEG00000044182	TARBP1	99	46.300	Mandrillus_leucophaeus
ENSDARG00000079055	si:dkey-85a20.4	99	70.819	ENSMAMG00000021760	si:dkey-85a20.4	99	56.625	Mastacembelus_armatus
ENSDARG00000079055	si:dkey-85a20.4	99	71.966	ENSMZEG00005005751	si:dkey-85a20.4	99	56.385	Maylandia_zebra
ENSDARG00000079055	si:dkey-85a20.4	99	55.232	ENSMAUG00000020968	Tarbp1	99	42.512	Mesocricetus_auratus
ENSDARG00000079055	si:dkey-85a20.4	99	47.387	ENSMICG00000015280	TARBP1	84	41.126	Microcebus_murinus
ENSDARG00000079055	si:dkey-85a20.4	99	54.983	ENSMOCG00000004128	Tarbp1	99	42.583	Microtus_ochrogaster
ENSDARG00000079055	si:dkey-85a20.4	97	70.979	ENSMMOG00000007795	si:dkey-85a20.4	99	55.452	Mola_mola
ENSDARG00000079055	si:dkey-85a20.4	99	54.296	ENSMODG00000008504	TARBP1	99	40.865	Monodelphis_domestica
ENSDARG00000079055	si:dkey-85a20.4	97	72.154	ENSMALG00000002916	si:dkey-85a20.4	99	56.595	Monopterus_albus
ENSDARG00000079055	si:dkey-85a20.4	99	54.639	MGP_CAROLIEiJ_G0031729	Tarbp1	79	62.162	Mus_caroli
ENSDARG00000079055	si:dkey-85a20.4	99	54.296	ENSMUSG00000090290	Tarbp1	89	44.888	Mus_musculus
ENSDARG00000079055	si:dkey-85a20.4	99	55.190	MGP_PahariEiJ_G0023326	Tarbp1	87	46.016	Mus_pahari
ENSDARG00000079055	si:dkey-85a20.4	99	54.811	MGP_SPRETEiJ_G0032846	Tarbp1	89	45.098	Mus_spretus
ENSDARG00000079055	si:dkey-85a20.4	99	53.833	ENSMPUG00000002802	TARBP1	99	46.672	Mustela_putorius_furo
ENSDARG00000079055	si:dkey-85a20.4	99	51.034	ENSMLUG00000002414	TARBP1	99	44.582	Myotis_lucifugus
ENSDARG00000079055	si:dkey-85a20.4	99	54.325	ENSNLEG00000002518	TARBP1	85	46.319	Nomascus_leucogenys
ENSDARG00000079055	si:dkey-85a20.4	80	54.255	ENSMEUG00000011370	-	64	53.896	Notamacropus_eugenii
ENSDARG00000079055	si:dkey-85a20.4	99	52.901	ENSOPRG00000013822	TARBP1	70	51.959	Ochotona_princeps
ENSDARG00000079055	si:dkey-85a20.4	99	55.190	ENSODEG00000005238	TARBP1	89	45.389	Octodon_degus
ENSDARG00000079055	si:dkey-85a20.4	99	71.307	ENSONIG00000009789	si:dkey-85a20.4	99	59.957	Oreochromis_niloticus
ENSDARG00000079055	si:dkey-85a20.4	99	52.778	ENSOCUG00000017418	TARBP1	84	45.279	Oryctolagus_cuniculus
ENSDARG00000079055	si:dkey-85a20.4	99	69.535	ENSORLG00000010529	si:dkey-85a20.4	99	54.512	Oryzias_latipes
ENSDARG00000079055	si:dkey-85a20.4	99	69.191	ENSORLG00020019264	si:dkey-85a20.4	99	54.472	Oryzias_latipes_hni
ENSDARG00000079055	si:dkey-85a20.4	99	69.019	ENSORLG00015003276	si:dkey-85a20.4	99	54.478	Oryzias_latipes_hsok
ENSDARG00000079055	si:dkey-85a20.4	99	49.827	ENSOGAG00000002379	TARBP1	87	42.530	Otolemur_garnettii
ENSDARG00000079055	si:dkey-85a20.4	99	52.632	ENSOARG00000003434	TARBP1	93	45.066	Ovis_aries
ENSDARG00000079055	si:dkey-85a20.4	99	54.246	ENSPPAG00000028097	TARBP1	99	46.356	Pan_paniscus
ENSDARG00000079055	si:dkey-85a20.4	99	53.195	ENSPPRG00000013561	TARBP1	87	45.029	Panthera_pardus
ENSDARG00000079055	si:dkey-85a20.4	99	53.195	ENSPTIG00000009281	TARBP1	99	46.450	Panthera_tigris_altaica
ENSDARG00000079055	si:dkey-85a20.4	99	54.325	ENSPTRG00000002124	TARBP1	87	45.530	Pan_troglodytes
ENSDARG00000079055	si:dkey-85a20.4	99	54.844	ENSPANG00000021933	TARBP1	87	45.669	Papio_anubis
ENSDARG00000079055	si:dkey-85a20.4	99	68.942	ENSPKIG00000016716	si:dkey-85a20.4	99	56.642	Paramormyrops_kingsleyae
ENSDARG00000079055	si:dkey-85a20.4	99	54.561	ENSPSIG00000010699	TARBP1	99	45.872	Pelodiscus_sinensis
ENSDARG00000079055	si:dkey-85a20.4	99	54.671	ENSPEMG00000006888	Tarbp1	91	46.513	Peromyscus_maniculatus_bairdii
ENSDARG00000079055	si:dkey-85a20.4	78	68.984	ENSPCIG00000029710	TARBP1	97	68.984	Phascolarctos_cinereus
ENSDARG00000079055	si:dkey-85a20.4	99	68.268	ENSPFOG00000013020	si:dkey-85a20.4	98	58.454	Poecilia_formosa
ENSDARG00000079055	si:dkey-85a20.4	99	68.394	ENSPLAG00000006044	si:dkey-85a20.4	99	54.833	Poecilia_latipinna
ENSDARG00000079055	si:dkey-85a20.4	99	68.912	ENSPMEG00000017857	si:dkey-85a20.4	99	54.681	Poecilia_mexicana
ENSDARG00000079055	si:dkey-85a20.4	99	68.566	ENSPREG00000022753	si:dkey-85a20.4	99	54.669	Poecilia_reticulata
ENSDARG00000079055	si:dkey-85a20.4	99	54.325	ENSPPYG00000000102	TARBP1	99	45.934	Pongo_abelii
ENSDARG00000079055	si:dkey-85a20.4	68	73.913	ENSPCAG00000004808	TARBP1	80	73.913	Procavia_capensis
ENSDARG00000079055	si:dkey-85a20.4	99	50.519	ENSPCOG00000005666	TARBP1	87	43.115	Propithecus_coquereli
ENSDARG00000079055	si:dkey-85a20.4	87	60.215	ENSPVAG00000014798	TARBP1	99	36.638	Pteropus_vampyrus
ENSDARG00000079055	si:dkey-85a20.4	99	72.539	ENSPNYG00000019135	si:dkey-85a20.4	99	55.252	Pundamilia_nyererei
ENSDARG00000079055	si:dkey-85a20.4	99	51.375	ENSRNOG00000053574	Tarbp1	89	43.627	Rattus_norvegicus
ENSDARG00000079055	si:dkey-85a20.4	99	54.844	ENSRBIG00000043362	TARBP1	95	42.175	Rhinopithecus_bieti
ENSDARG00000079055	si:dkey-85a20.4	99	54.844	ENSRROG00000029527	TARBP1	91	45.669	Rhinopithecus_roxellana
ENSDARG00000079055	si:dkey-85a20.4	99	53.713	ENSSBOG00000034503	TARBP1	98	45.768	Saimiri_boliviensis_boliviensis
ENSDARG00000079055	si:dkey-85a20.4	99	55.043	ENSSHAG00000000013	TARBP1	99	45.827	Sarcophilus_harrisii
ENSDARG00000079055	si:dkey-85a20.4	99	70.826	ENSSFOG00015002660	si:dkey-85a20.4	96	61.103	Scleropages_formosus
ENSDARG00000079055	si:dkey-85a20.4	99	71.088	ENSSMAG00000007081	si:dkey-85a20.4	99	55.657	Scophthalmus_maximus
ENSDARG00000079055	si:dkey-85a20.4	99	68.205	ENSSDUG00000023566	si:dkey-85a20.4	99	56.830	Seriola_dumerili
ENSDARG00000079055	si:dkey-85a20.4	99	72.539	ENSSLDG00000020200	si:dkey-85a20.4	99	56.898	Seriola_lalandi_dorsalis
ENSDARG00000079055	si:dkey-85a20.4	84	54.588	ENSSARG00000012207	TARBP1	75	54.197	Sorex_araneus
ENSDARG00000079055	si:dkey-85a20.4	99	55.517	ENSSPUG00000015364	TARBP1	99	40.481	Sphenodon_punctatus
ENSDARG00000079055	si:dkey-85a20.4	99	72.586	ENSSPAG00000007213	si:dkey-85a20.4	99	56.728	Stegastes_partitus
ENSDARG00000079055	si:dkey-85a20.4	99	53.195	ENSSSCG00000010160	TARBP1	99	41.151	Sus_scrofa
ENSDARG00000079055	si:dkey-85a20.4	99	54.623	ENSTGUG00000010214	TARBP1	99	44.875	Taeniopygia_guttata
ENSDARG00000079055	si:dkey-85a20.4	99	69.625	ENSTNIG00000016586	si:dkey-85a20.4	99	59.764	Tetraodon_nigroviridis
ENSDARG00000079055	si:dkey-85a20.4	86	50.099	ENSTTRG00000008707	TARBP1	80	44.954	Tursiops_truncatus
ENSDARG00000079055	si:dkey-85a20.4	99	53.114	ENSUMAG00000006730	TARBP1	96	46.160	Ursus_maritimus
ENSDARG00000079055	si:dkey-85a20.4	75	70.652	ENSVPAG00000007665	TARBP1	74	70.238	Vicugna_pacos
ENSDARG00000079055	si:dkey-85a20.4	99	53.287	ENSVVUG00000007460	TARBP1	98	46.269	Vulpes_vulpes
ENSDARG00000079055	si:dkey-85a20.4	99	50.775	ENSXETG00000016224	tarbp1	99	43.024	Xenopus_tropicalis
ENSDARG00000079055	si:dkey-85a20.4	97	66.025	ENSXCOG00000011779	si:dkey-85a20.4	100	51.064	Xiphophorus_couchianus
ENSDARG00000079055	si:dkey-85a20.4	91	67.167	ENSXMAG00000009600	si:dkey-85a20.4	100	56.357	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	IEA	Function
GO:0006396	RNA processing	-	IEA	Process
GO:0008173	RNA methyltransferase activity	-	IEA	Function
GO:0016423	tRNA (guanine) methyltransferase activity	21873635.	IBA	Function
GO:0030488	tRNA methylation	21873635.	IBA	Process