EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000079245 (Gene tree)
Gene ID: 100000683
Gene Symbol: si:dkey-73p2.2
Alias: -
Full Name: si:dkey-73p2.2
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 8327 bases
Position: chr3:4294936-4303262
Accession: ZDB-GENE-131119-50
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000099312	MMR_HSR1	PF01926.23	1.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000112819	-	2901	XM_021474819	ENSDARP00000099312	916 (aa)	XP_021330494	F1RBS9

Gene Model

Click here to download ENSDARG00000079245's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000079245's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000079245	si:dkey-73p2.2	53	30.418	ENSDARG00000087012	BX004816.2	65	31.015
ENSDARG00000079245	si:dkey-73p2.2	52	44.928	ENSDARG00000076573	si:dkey-88j15.3	93	43.262
ENSDARG00000079245	si:dkey-73p2.2	55	32.903	ENSDARG00000099678	BX569789.1	73	36.250
ENSDARG00000079245	si:dkey-73p2.2	51	37.313	ENSDARG00000069707	si:ch211-113e8.5	85	36.567
ENSDARG00000079245	si:dkey-73p2.2	50	44.043	ENSDARG00000040497	BX004816.1	87	39.895
ENSDARG00000079245	si:dkey-73p2.2	91	80.400	ENSDARG00000078832	si:dkey-73p2.3	67	78.674
ENSDARG00000079245	si:dkey-73p2.2	51	83.898	ENSDARG00000095076	si:dkey-73p2.3	95	84.889
ENSDARG00000079245	si:dkey-73p2.2	50	38.589	ENSDARG00000112755	CR394546.4	96	37.674
ENSDARG00000079245	si:dkey-73p2.2	50	74.912	ENSDARG00000095739	si:dkey-73p2.1	99	74.138
ENSDARG00000079245	si:dkey-73p2.2	58	37.343	ENSDARG00000086048	si:ch211-229i14.2	93	36.684
ENSDARG00000079245	si:dkey-73p2.2	50	75.618	ENSDARG00000115941	LO018551.1	99	74.828
ENSDARG00000079245	si:dkey-73p2.2	99	81.760	ENSDARG00000093476	si:dkey-175d9.2	99	81.760
ENSDARG00000079245	si:dkey-73p2.2	51	37.768	ENSDARG00000100199	si:ch1073-185p12.2	86	33.432
ENSDARG00000079245	si:dkey-73p2.2	58	42.936	ENSDARG00000079471	si:dkey-88j15.4	88	41.989

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000079245	si:dkey-73p2.2	54	38.941	ENSAPOG00000006169	-	90	34.656	Acanthochromis_polyacanthus
ENSDARG00000079245	si:dkey-73p2.2	50	35.962	ENSACIG00000000893	-	85	44.601	Amphilophus_citrinellus
ENSDARG00000079245	si:dkey-73p2.2	51	43.636	ENSAOCG00000008522	-	71	48.624	Amphiprion_ocellaris
ENSDARG00000079245	si:dkey-73p2.2	51	44.574	ENSAPEG00000004217	-	81	47.442	Amphiprion_percula
ENSDARG00000079245	si:dkey-73p2.2	51	35.741	ENSATEG00000005844	-	81	34.256	Anabas_testudineus
ENSDARG00000079245	si:dkey-73p2.2	50	35.336	ENSACLG00000011921	-	86	34.629	Astatotilapia_calliptera
ENSDARG00000079245	si:dkey-73p2.2	53	35.959	ENSACLG00000011913	-	68	41.071	Astatotilapia_calliptera
ENSDARG00000079245	si:dkey-73p2.2	50	37.591	ENSAMXG00000031520	-	69	41.395	Astyanax_mexicanus
ENSDARG00000079245	si:dkey-73p2.2	55	41.212	ENSAMXG00000042278	-	83	41.033	Astyanax_mexicanus
ENSDARG00000079245	si:dkey-73p2.2	50	42.045	ENSCVAG00000003300	-	65	45.415	Cyprinodon_variegatus
ENSDARG00000079245	si:dkey-73p2.2	50	44.398	ENSGAFG00000002939	-	92	34.454	Gambusia_affinis
ENSDARG00000079245	si:dkey-73p2.2	50	42.963	ENSGACG00000008318	-	92	46.009	Gasterosteus_aculeatus
ENSDARG00000079245	si:dkey-73p2.2	55	35.799	ENSKMAG00000002395	-	62	33.795	Kryptolebias_marmoratus
ENSDARG00000079245	si:dkey-73p2.2	50	37.363	ENSLBEG00000012508	-	70	38.767	Labrus_bergylta
ENSDARG00000079245	si:dkey-73p2.2	50	46.512	ENSLBEG00000020071	-	79	50.228	Labrus_bergylta
ENSDARG00000079245	si:dkey-73p2.2	51	38.462	ENSLBEG00000025779	-	67	39.301	Labrus_bergylta
ENSDARG00000079245	si:dkey-73p2.2	50	37.363	ENSLBEG00000025786	-	83	37.363	Labrus_bergylta
ENSDARG00000079245	si:dkey-73p2.2	51	39.931	ENSLBEG00000005618	-	93	38.144	Labrus_bergylta
ENSDARG00000079245	si:dkey-73p2.2	50	40.602	ENSLBEG00000019815	-	86	37.003	Labrus_bergylta
ENSDARG00000079245	si:dkey-73p2.2	52	45.725	ENSLOCG00000000272	-	97	50.224	Lepisosteus_oculatus
ENSDARG00000079245	si:dkey-73p2.2	52	36.042	ENSLOCG00000011715	-	74	41.395	Lepisosteus_oculatus
ENSDARG00000079245	si:dkey-73p2.2	51	43.775	ENSMAMG00000015996	-	79	45.070	Mastacembelus_armatus
ENSDARG00000079245	si:dkey-73p2.2	51	36.014	ENSMZEG00005006351	-	88	35.664	Maylandia_zebra
ENSDARG00000079245	si:dkey-73p2.2	50	36.042	ENSMZEG00005006362	-	78	35.336	Maylandia_zebra
ENSDARG00000079245	si:dkey-73p2.2	51	41.923	ENSMALG00000009646	-	75	47.196	Monopterus_albus
ENSDARG00000079245	si:dkey-73p2.2	50	39.231	ENSNBRG00000005664	-	67	41.071	Neolamprologus_brichardi
ENSDARG00000079245	si:dkey-73p2.2	50	42.800	ENSONIG00000017831	-	87	44.843	Oreochromis_niloticus
ENSDARG00000079245	si:dkey-73p2.2	58	35.447	ENSORLG00000011672	-	83	33.718	Oryzias_latipes
ENSDARG00000079245	si:dkey-73p2.2	57	36.527	ENSORLG00020008404	-	94	34.884	Oryzias_latipes_hni
ENSDARG00000079245	si:dkey-73p2.2	52	39.362	ENSPKIG00000014004	zgc:113625	57	47.500	Paramormyrops_kingsleyae
ENSDARG00000079245	si:dkey-73p2.2	53	39.000	ENSPKIG00000014136	zgc:113625	76	46.119	Paramormyrops_kingsleyae
ENSDARG00000079245	si:dkey-73p2.2	50	37.124	ENSPFOG00000023868	-	90	42.857	Poecilia_formosa
ENSDARG00000079245	si:dkey-73p2.2	53	39.550	ENSPFOG00000024153	-	80	38.730	Poecilia_formosa
ENSDARG00000079245	si:dkey-73p2.2	52	46.524	ENSPFOG00000021960	-	78	46.524	Poecilia_formosa
ENSDARG00000079245	si:dkey-73p2.2	51	38.206	ENSPFOG00000001141	-	93	45.402	Poecilia_formosa
ENSDARG00000079245	si:dkey-73p2.2	52	41.946	ENSPLAG00000017835	-	90	46.296	Poecilia_latipinna
ENSDARG00000079245	si:dkey-73p2.2	50	37.374	ENSPMEG00000005464	-	69	43.810	Poecilia_mexicana
ENSDARG00000079245	si:dkey-73p2.2	50	37.124	ENSPMEG00000023201	-	80	39.310	Poecilia_mexicana
ENSDARG00000079245	si:dkey-73p2.2	51	35.836	ENSPMEG00000019934	-	69	39.648	Poecilia_mexicana
ENSDARG00000079245	si:dkey-73p2.2	52	37.248	ENSPMEG00000023187	-	81	46.009	Poecilia_mexicana
ENSDARG00000079245	si:dkey-73p2.2	53	39.161	ENSPREG00000022613	-	86	34.332	Poecilia_reticulata
ENSDARG00000079245	si:dkey-73p2.2	52	37.217	ENSPREG00000009447	-	93	37.097	Poecilia_reticulata
ENSDARG00000079245	si:dkey-73p2.2	50	39.331	ENSPREG00000000360	-	97	40.187	Poecilia_reticulata
ENSDARG00000079245	si:dkey-73p2.2	57	37.910	ENSPREG00000009303	-	91	37.463	Poecilia_reticulata
ENSDARG00000079245	si:dkey-73p2.2	50	38.869	ENSPREG00000004648	-	88	39.273	Poecilia_reticulata
ENSDARG00000079245	si:dkey-73p2.2	50	41.667	ENSPNYG00000003549	-	92	41.270	Pundamilia_nyererei
ENSDARG00000079245	si:dkey-73p2.2	50	42.797	ENSPNAG00000022648	-	78	45.894	Pygocentrus_nattereri
ENSDARG00000079245	si:dkey-73p2.2	53	38.462	ENSSFOG00015007857	-	86	43.333	Scleropages_formosus
ENSDARG00000079245	si:dkey-73p2.2	53	37.975	ENSSPAG00000002408	-	80	38.390	Stegastes_partitus
ENSDARG00000079245	si:dkey-73p2.2	50	41.379	ENSXCOG00000019571	-	92	39.871	Xiphophorus_couchianus
ENSDARG00000079245	si:dkey-73p2.2	50	44.269	ENSXCOG00000019572	-	87	40.317	Xiphophorus_couchianus
ENSDARG00000079245	si:dkey-73p2.2	51	40.830	ENSXMAG00000025992	-	84	42.909	Xiphophorus_maculatus
ENSDARG00000079245	si:dkey-73p2.2	51	42.268	ENSXMAG00000026906	-	89	40.264	Xiphophorus_maculatus