EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDARG00000079391 (Gene tree)
Gene ID: 568235
Gene Symbol: mrpl42
Alias: -
Full Name: mitochondrial ribosomal protein L42
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 3200 bases
Position: chr4:1821637-1824836
Accession: ZDB-GENE-101014-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000103369	MRP-S32	PF10210.9	4.1e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000111858	-	624	-	ENSDARP00000103369	144 (aa)	-	F1Q839

Gene Model

Click here to download ENSDARG00000079391's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000079391's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000079391	mrpl42	100	56.164	ENSAPOG00000010677	mrpl42	100	56.164	Acanthochromis_polyacanthus
ENSDARG00000079391	mrpl42	100	58.621	ENSAOCG00000011620	mrpl42	100	58.621	Amphiprion_ocellaris
ENSDARG00000079391	mrpl42	100	58.621	ENSAPEG00000019516	mrpl42	100	58.621	Amphiprion_percula
ENSDARG00000079391	mrpl42	90	54.962	ENSATEG00000014106	mrpl42	100	54.962	Anabas_testudineus
ENSDARG00000079391	mrpl42	82	60.833	ENSACAG00000012606	MRPL42	81	60.833	Anolis_carolinensis
ENSDARG00000079391	mrpl42	100	53.793	ENSACLG00000026856	mrpl42	100	53.793	Astatotilapia_calliptera
ENSDARG00000079391	mrpl42	100	47.222	ENSAMXG00000035149	mrpl42	100	47.222	Astyanax_mexicanus
ENSDARG00000079391	mrpl42	99	52.113	ENSCSEG00000010067	mrpl42	98	52.113	Cynoglossus_semilaevis
ENSDARG00000079391	mrpl42	100	56.552	ENSCVAG00000002612	mrpl42	100	56.552	Cyprinodon_variegatus
ENSDARG00000079391	mrpl42	69	43.810	ENSEBUG00000005581	mrpl42	78	43.810	Eptatretus_burgeri
ENSDARG00000079391	mrpl42	99	62.937	ENSELUG00000001973	mrpl42	99	62.937	Esox_lucius
ENSDARG00000079391	mrpl42	100	55.862	ENSFHEG00000018696	mrpl42	100	55.862	Fundulus_heteroclitus
ENSDARG00000079391	mrpl42	67	67.010	ENSGMOG00000002972	mrpl42	100	67.010	Gadus_morhua
ENSDARG00000079391	mrpl42	100	55.862	ENSGAFG00000018373	mrpl42	100	55.862	Gambusia_affinis
ENSDARG00000079391	mrpl42	67	74.227	ENSGACG00000018811	mrpl42	100	74.227	Gasterosteus_aculeatus
ENSDARG00000079391	mrpl42	100	53.793	ENSHBUG00000015960	mrpl42	100	53.793	Haplochromis_burtoni
ENSDARG00000079391	mrpl42	100	55.556	ENSHCOG00000014046	mrpl42	100	55.556	Hippocampus_comes
ENSDARG00000079391	mrpl42	83	52.941	ENSIPUG00000015395	mrpl42	80	52.941	Ictalurus_punctatus
ENSDARG00000079391	mrpl42	100	53.472	ENSKMAG00000013671	mrpl42	100	53.472	Kryptolebias_marmoratus
ENSDARG00000079391	mrpl42	100	54.483	ENSLBEG00000028618	mrpl42	99	54.483	Labrus_bergylta
ENSDARG00000079391	mrpl42	50	66.667	ENSLOCG00000015284	mrpl42	57	66.667	Lepisosteus_oculatus
ENSDARG00000079391	mrpl42	100	55.556	ENSMAMG00000009737	mrpl42	100	55.556	Mastacembelus_armatus
ENSDARG00000079391	mrpl42	100	53.793	ENSMZEG00005008545	mrpl42	96	53.793	Maylandia_zebra
ENSDARG00000079391	mrpl42	67	62.887	ENSMMOG00000002317	mrpl42	64	62.887	Mola_mola
ENSDARG00000079391	mrpl42	100	50.323	ENSMALG00000015794	mrpl42	96	50.323	Monopterus_albus
ENSDARG00000079391	mrpl42	100	53.793	ENSNBRG00000003307	mrpl42	100	53.793	Neolamprologus_brichardi
ENSDARG00000079391	mrpl42	100	54.483	ENSONIG00000011753	mrpl42	100	54.483	Oreochromis_niloticus
ENSDARG00000079391	mrpl42	82	52.542	ENSOANG00000019984	-	80	52.542	Ornithorhynchus_anatinus
ENSDARG00000079391	mrpl42	100	52.381	ENSORLG00000013500	mrpl42	85	51.370	Oryzias_latipes
ENSDARG00000079391	mrpl42	100	53.425	ENSORLG00020000548	mrpl42	100	53.425	Oryzias_latipes_hni
ENSDARG00000079391	mrpl42	100	54.110	ENSORLG00015016984	mrpl42	100	54.110	Oryzias_latipes_hsok
ENSDARG00000079391	mrpl42	100	54.795	ENSOMEG00000010700	mrpl42	100	54.795	Oryzias_melastigma
ENSDARG00000079391	mrpl42	100	57.534	ENSPKIG00000025457	mrpl42	100	57.534	Paramormyrops_kingsleyae
ENSDARG00000079391	mrpl42	69	64.646	ENSPMGG00000019705	mrpl42	70	64.646	Periophthalmus_magnuspinnatus
ENSDARG00000079391	mrpl42	81	54.545	ENSPMAG00000008091	mrpl42	77	54.545	Petromyzon_marinus
ENSDARG00000079391	mrpl42	100	54.483	ENSPFOG00000016539	mrpl42	99	54.483	Poecilia_formosa
ENSDARG00000079391	mrpl42	100	55.172	ENSPLAG00000001255	mrpl42	100	55.172	Poecilia_latipinna
ENSDARG00000079391	mrpl42	100	54.483	ENSPMEG00000016462	mrpl42	100	54.483	Poecilia_mexicana
ENSDARG00000079391	mrpl42	84	59.016	ENSPREG00000012053	mrpl42	89	59.016	Poecilia_reticulata
ENSDARG00000079391	mrpl42	100	53.793	ENSPNYG00000009586	mrpl42	100	53.793	Pundamilia_nyererei
ENSDARG00000079391	mrpl42	98	50.355	ENSPNAG00000020753	mrpl42	97	50.355	Pygocentrus_nattereri
ENSDARG00000079391	mrpl42	100	54.483	ENSSMAG00000000262	mrpl42	100	54.483	Scophthalmus_maximus
ENSDARG00000079391	mrpl42	100	55.862	ENSSDUG00000005949	mrpl42	100	55.862	Seriola_dumerili
ENSDARG00000079391	mrpl42	100	55.862	ENSSLDG00000010159	mrpl42	100	55.862	Seriola_lalandi_dorsalis
ENSDARG00000079391	mrpl42	100	53.103	ENSTRUG00000025949	mrpl42	99	53.103	Takifugu_rubripes
ENSDARG00000079391	mrpl42	72	58.491	ENSXETG00000032902	mrpl42	85	58.491	Xenopus_tropicalis
ENSDARG00000079391	mrpl42	100	52.778	ENSXCOG00000013875	mrpl42	98	52.778	Xiphophorus_couchianus