EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000079452 (Gene tree)
Gene ID: 566042
Gene Symbol: rbm46
Alias: fe11d09|wu:fe11d09|zgc:153695
Full Name: RNA binding motif protein 46
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 10614 bases
Position: chr1:10127163-10137776
Accession: ZDB-GENE-061013-298
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000099341	DND1_DSRM	PF14709.7	1.7e-23	1	1
ENSDARP00000150117	DND1_DSRM	PF14709.7	1.7e-23	1	1
ENSDARP00000099341	RRM_1	PF00076.22	1.9e-36	1	3
ENSDARP00000099341	RRM_1	PF00076.22	1.9e-36	2	3
ENSDARP00000099341	RRM_1	PF00076.22	1.9e-36	3	3
ENSDARP00000150117	RRM_1	PF00076.22	2.1e-36	1	3
ENSDARP00000150117	RRM_1	PF00076.22	2.1e-36	2	3
ENSDARP00000150117	RRM_1	PF00076.22	2.1e-36	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000110698	-	2079	-	ENSDARP00000099341	510 (aa)	-	F1RBR1
ENSDART00000187740	-	2257	-	ENSDARP00000150117	523 (aa)	-	A0A2R8QE32

Gene Model

Click here to download ENSDARG00000079452's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000079452's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000079452	rbm46	60	67.208	ENSDARG00000061985	rbm47	51	65.260
ENSDARG00000079452	rbm46	78	68.707	ENSDARG00000002968	a1cf	79	61.516
ENSDARG00000079452	rbm46	59	53.618	ENSDARG00000014569	hnrnpr	95	49.020
ENSDARG00000079452	rbm46	60	54.019	ENSDARG00000026723	syncripl	96	53.073
ENSDARG00000079452	rbm46	59	53.947	ENSDARG00000040184	syncrip	98	52.137

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000079452	rbm46	99	64.068	ENSG00000151962	RBM46	89	86.441	Homo_sapiens
ENSDARG00000079452	rbm46	87	69.670	ENSAPOG00000009209	rbm46	90	69.697	Acanthochromis_polyacanthus
ENSDARG00000079452	rbm46	99	64.449	ENSAMEG00000013290	RBM46	97	64.449	Ailuropoda_melanoleuca
ENSDARG00000079452	rbm46	87	64.565	ENSACIG00000014500	rbm46	88	63.931	Amphilophus_citrinellus
ENSDARG00000079452	rbm46	87	70.022	ENSAOCG00000001892	-	99	65.209	Amphiprion_ocellaris
ENSDARG00000079452	rbm46	87	69.977	ENSAPEG00000017762	rbm46	96	69.977	Amphiprion_percula
ENSDARG00000079452	rbm46	99	63.780	ENSATEG00000010775	rbm46	96	63.780	Anabas_testudineus
ENSDARG00000079452	rbm46	88	66.376	ENSAPLG00000005116	RBM46	97	66.017	Anas_platyrhynchos
ENSDARG00000079452	rbm46	99	64.423	ENSACAG00000015599	RBM46	97	64.038	Anolis_carolinensis
ENSDARG00000079452	rbm46	99	64.313	ENSANAG00000029193	RBM46	96	68.132	Aotus_nancymaae
ENSDARG00000079452	rbm46	93	66.800	ENSACLG00000016153	rbm46	94	63.586	Astatotilapia_calliptera
ENSDARG00000079452	rbm46	87	76.116	ENSAMXG00000009397	rbm46	97	76.116	Astyanax_mexicanus
ENSDARG00000079452	rbm46	100	72.000	ENSAMXG00000020892	-	100	72.000	Astyanax_mexicanus
ENSDARG00000079452	rbm46	99	63.757	ENSBTAG00000001696	RBM46	97	64.137	Bos_taurus
ENSDARG00000079452	rbm46	99	63.671	ENSCJAG00000001768	RBM46	96	67.174	Callithrix_jacchus
ENSDARG00000079452	rbm46	99	64.068	ENSCAFG00000008473	RBM46	93	68.330	Canis_familiaris
ENSDARG00000079452	rbm46	99	64.068	ENSCAFG00020002468	RBM46	97	64.083	Canis_lupus_dingo
ENSDARG00000079452	rbm46	99	64.461	ENSCHIG00000000502	RBM46	93	68.113	Capra_hircus
ENSDARG00000079452	rbm46	88	68.627	ENSTSYG00000010435	RBM46	96	68.559	Carlito_syrichta
ENSDARG00000079452	rbm46	70	69.972	ENSCAPG00000011841	-	96	68.681	Cavia_aperea
ENSDARG00000079452	rbm46	87	67.544	ENSCAPG00000011928	-	93	66.883	Cavia_aperea
ENSDARG00000079452	rbm46	96	63.928	ENSCPOG00000020396	-	97	63.618	Cavia_porcellus
ENSDARG00000079452	rbm46	99	63.048	ENSCPOG00000010284	-	96	66.811	Cavia_porcellus
ENSDARG00000079452	rbm46	99	61.698	ENSCPOG00000019272	-	97	61.194	Cavia_porcellus
ENSDARG00000079452	rbm46	99	64.030	ENSCCAG00000027619	-	96	67.686	Cebus_capucinus
ENSDARG00000079452	rbm46	99	52.399	ENSCCAG00000001323	-	94	55.531	Cebus_capucinus
ENSDARG00000079452	rbm46	88	68.627	ENSCATG00000040148	RBM46	96	67.826	Cercocebus_atys
ENSDARG00000079452	rbm46	96	64.215	ENSCLAG00000011886	-	97	63.654	Chinchilla_lanigera
ENSDARG00000079452	rbm46	99	63.740	ENSCLAG00000005846	-	96	67.028	Chinchilla_lanigera
ENSDARG00000079452	rbm46	99	64.516	ENSCSAG00000003263	RBM46	97	63.894	Chlorocebus_sabaeus
ENSDARG00000079452	rbm46	99	62.998	ENSCHOG00000003429	RBM46	97	64.122	Choloepus_hoffmanni
ENSDARG00000079452	rbm46	83	67.661	ENSCPBG00000009314	RBM46	94	67.426	Chrysemys_picta_bellii
ENSDARG00000079452	rbm46	88	67.896	ENSCANG00000039065	RBM46	96	67.826	Colobus_angolensis_palliatus
ENSDARG00000079452	rbm46	99	63.947	ENSCGRG00001016714	Rbm46	96	67.904	Cricetulus_griseus_chok1gshd
ENSDARG00000079452	rbm46	99	63.947	ENSCGRG00000011738	Rbm46	96	67.904	Cricetulus_griseus_crigri
ENSDARG00000079452	rbm46	88	60.714	ENSCSEG00000005530	rbm46	96	60.714	Cynoglossus_semilaevis
ENSDARG00000079452	rbm46	88	66.964	ENSCVAG00000021013	rbm46	94	66.446	Cyprinodon_variegatus
ENSDARG00000079452	rbm46	99	64.829	ENSDNOG00000016195	RBM46	97	64.650	Dasypus_novemcinctus
ENSDARG00000079452	rbm46	99	63.774	ENSDORG00000006405	Rbm46	96	67.896	Dipodomys_ordii
ENSDARG00000079452	rbm46	99	62.879	ENSETEG00000014902	RBM46	97	62.879	Echinops_telfairi
ENSDARG00000079452	rbm46	99	65.019	ENSEASG00005015821	RBM46	97	65.019	Equus_asinus_asinus
ENSDARG00000079452	rbm46	88	68.996	ENSECAG00000007649	RBM46	93	68.996	Equus_caballus
ENSDARG00000079452	rbm46	99	61.815	ENSEEUG00000011824	RBM46	97	62.357	Erinaceus_europaeus
ENSDARG00000079452	rbm46	73	74.271	ENSELUG00000008166	rbm46	97	73.107	Esox_lucius
ENSDARG00000079452	rbm46	99	63.158	ENSFCAG00000029812	RBM46	96	68.490	Felis_catus
ENSDARG00000079452	rbm46	87	66.372	ENSFALG00000013157	RBM46	89	65.359	Ficedula_albicollis
ENSDARG00000079452	rbm46	91	64.211	ENSFDAG00000006445	-	93	64.211	Fukomys_damarensis
ENSDARG00000079452	rbm46	99	63.027	ENSFDAG00000019281	-	97	62.121	Fukomys_damarensis
ENSDARG00000079452	rbm46	83	64.218	ENSFHEG00000013257	rbm46	94	64.218	Fundulus_heteroclitus
ENSDARG00000079452	rbm46	88	61.803	ENSGALG00000009278	RBM46	97	61.803	Gallus_gallus
ENSDARG00000079452	rbm46	78	79.683	ENSGAFG00000020245	rbm46	94	79.430	Gambusia_affinis
ENSDARG00000079452	rbm46	92	65.235	ENSGAGG00000002019	RBM46	92	65.235	Gopherus_agassizii
ENSDARG00000079452	rbm46	99	63.894	ENSGGOG00000001876	RBM46	96	67.826	Gorilla_gorilla
ENSDARG00000079452	rbm46	87	65.996	ENSHBUG00000009609	rbm46	92	70.071	Haplochromis_burtoni
ENSDARG00000079452	rbm46	95	55.110	ENSHGLG00000002940	-	95	54.653	Heterocephalus_glaber_female
ENSDARG00000079452	rbm46	99	61.176	ENSHGLG00000002463	-	96	68.558	Heterocephalus_glaber_female
ENSDARG00000079452	rbm46	97	54.150	ENSHGLG00000010742	-	97	53.635	Heterocephalus_glaber_female
ENSDARG00000079452	rbm46	97	54.150	ENSHGLG00100004977	-	97	53.635	Heterocephalus_glaber_male
ENSDARG00000079452	rbm46	99	63.776	ENSHGLG00100012752	-	96	67.031	Heterocephalus_glaber_male
ENSDARG00000079452	rbm46	95	53.000	ENSHGLG00100018987	-	95	52.569	Heterocephalus_glaber_male
ENSDARG00000079452	rbm46	87	52.036	ENSHCOG00000012998	rbm46	86	57.846	Hippocampus_comes
ENSDARG00000079452	rbm46	97	75.000	ENSIPUG00000024038	rbm46	97	74.857	Ictalurus_punctatus
ENSDARG00000079452	rbm46	99	64.449	ENSSTOG00000007918	RBM46	96	68.490	Ictidomys_tridecemlineatus
ENSDARG00000079452	rbm46	88	69.214	ENSJJAG00000003902	Rbm46	96	69.147	Jaculus_jaculus
ENSDARG00000079452	rbm46	99	64.370	ENSKMAG00000015127	rbm46	96	64.453	Kryptolebias_marmoratus
ENSDARG00000079452	rbm46	99	65.152	ENSLACG00000002062	RBM46	97	65.152	Latimeria_chalumnae
ENSDARG00000079452	rbm46	100	68.401	ENSLOCG00000008298	rbm46	99	71.183	Lepisosteus_oculatus
ENSDARG00000079452	rbm46	88	67.826	ENSLAFG00000015448	RBM46	97	67.679	Loxodonta_africana
ENSDARG00000079452	rbm46	88	68.627	ENSMFAG00000043485	RBM46	96	67.826	Macaca_fascicularis
ENSDARG00000079452	rbm46	88	68.627	ENSMMUG00000021147	RBM46	93	67.896	Macaca_mulatta
ENSDARG00000079452	rbm46	88	68.627	ENSMNEG00000002787	RBM46	96	67.826	Macaca_nemestrina
ENSDARG00000079452	rbm46	88	68.627	ENSMLEG00000029756	RBM46	96	67.826	Mandrillus_leucophaeus
ENSDARG00000079452	rbm46	89	72.113	ENSMAMG00000009093	rbm46	99	67.311	Mastacembelus_armatus
ENSDARG00000079452	rbm46	92	68.085	ENSMZEG00005027849	rbm46	96	67.865	Maylandia_zebra
ENSDARG00000079452	rbm46	88	61.588	ENSMGAG00000001457	RBM46	98	61.588	Meleagris_gallopavo
ENSDARG00000079452	rbm46	99	63.947	ENSMAUG00000009911	Rbm46	96	67.904	Mesocricetus_auratus
ENSDARG00000079452	rbm46	99	63.774	ENSMICG00000042747	RBM46	96	67.686	Microcebus_murinus
ENSDARG00000079452	rbm46	99	64.151	ENSMOCG00000001188	Rbm46	96	68.113	Microtus_ochrogaster
ENSDARG00000079452	rbm46	87	66.740	ENSMMOG00000011214	rbm46	97	61.877	Mola_mola
ENSDARG00000079452	rbm46	88	68.559	ENSMODG00000001302	RBM46	78	68.330	Monodelphis_domestica
ENSDARG00000079452	rbm46	86	66.815	ENSMALG00000006185	rbm46	94	66.815	Monopterus_albus
ENSDARG00000079452	rbm46	99	64.449	MGP_CAROLIEiJ_G0025101	Rbm46	96	68.490	Mus_caroli
ENSDARG00000079452	rbm46	99	64.449	ENSMUSG00000033882	Rbm46	96	68.490	Mus_musculus
ENSDARG00000079452	rbm46	99	63.567	MGP_PahariEiJ_G0026544	Rbm46	96	67.686	Mus_pahari
ENSDARG00000079452	rbm46	99	64.639	MGP_SPRETEiJ_G0026043	Rbm46	96	68.709	Mus_spretus
ENSDARG00000079452	rbm46	88	67.896	ENSMPUG00000005670	RBM46	93	68.559	Mustela_putorius_furo
ENSDARG00000079452	rbm46	99	64.381	ENSMLUG00000003221	RBM46	97	64.205	Myotis_lucifugus
ENSDARG00000079452	rbm46	99	64.528	ENSNGAG00000004231	Rbm46	96	68.103	Nannospalax_galili
ENSDARG00000079452	rbm46	87	69.731	ENSNBRG00000000273	rbm46	84	70.022	Neolamprologus_brichardi
ENSDARG00000079452	rbm46	88	68.410	ENSNLEG00000006184	RBM46	96	67.609	Nomascus_leucogenys
ENSDARG00000079452	rbm46	81	67.453	ENSMEUG00000013328	RBM46	99	66.986	Notamacropus_eugenii
ENSDARG00000079452	rbm46	52	82.642	ENSOPRG00000007136	RBM46	95	83.209	Ochotona_princeps
ENSDARG00000079452	rbm46	88	67.965	ENSODEG00000018002	-	88	67.538	Octodon_degus
ENSDARG00000079452	rbm46	99	63.740	ENSODEG00000000735	-	96	67.462	Octodon_degus
ENSDARG00000079452	rbm46	87	67.699	ENSONIG00000014096	rbm46	96	68.363	Oreochromis_niloticus
ENSDARG00000079452	rbm46	88	67.028	ENSOANG00000002141	RBM46	94	66.379	Ornithorhynchus_anatinus
ENSDARG00000079452	rbm46	99	64.151	ENSOCUG00000017859	RBM46	97	64.137	Oryctolagus_cuniculus
ENSDARG00000079452	rbm46	92	63.693	ENSORLG00000002429	rbm46	89	67.929	Oryzias_latipes
ENSDARG00000079452	rbm46	88	67.467	ENSORLG00020022154	rbm46	95	61.781	Oryzias_latipes_hni
ENSDARG00000079452	rbm46	88	67.763	ENSORLG00015020234	rbm46	93	66.739	Oryzias_latipes_hsok
ENSDARG00000079452	rbm46	87	64.565	ENSOMEG00000022580	rbm46	99	61.303	Oryzias_melastigma
ENSDARG00000079452	rbm46	99	63.894	ENSOGAG00000005647	RBM46	97	64.272	Otolemur_garnettii
ENSDARG00000079452	rbm46	99	64.083	ENSOARG00000016406	RBM46	97	64.639	Ovis_aries
ENSDARG00000079452	rbm46	88	68.627	ENSPPAG00000043236	RBM46	96	67.826	Pan_paniscus
ENSDARG00000079452	rbm46	99	64.068	ENSPPRG00000009416	RBM46	96	68.490	Panthera_pardus
ENSDARG00000079452	rbm46	99	64.068	ENSPTIG00000017449	RBM46	96	68.490	Panthera_tigris_altaica
ENSDARG00000079452	rbm46	88	68.627	ENSPTRG00000016538	RBM46	96	67.826	Pan_troglodytes
ENSDARG00000079452	rbm46	99	63.894	ENSPANG00000004186	RBM46	96	67.826	Papio_anubis
ENSDARG00000079452	rbm46	99	69.591	ENSPKIG00000015334	rbm46	90	69.246	Paramormyrops_kingsleyae
ENSDARG00000079452	rbm46	88	67.912	ENSPSIG00000006429	RBM46	92	67.912	Pelodiscus_sinensis
ENSDARG00000079452	rbm46	54	83.516	ENSPMGG00000019872	rbm46	95	83.516	Periophthalmus_magnuspinnatus
ENSDARG00000079452	rbm46	99	63.947	ENSPEMG00000013899	Rbm46	96	67.904	Peromyscus_maniculatus_bairdii
ENSDARG00000079452	rbm46	99	64.068	ENSPCIG00000029626	RBM46	93	68.341	Phascolarctos_cinereus
ENSDARG00000079452	rbm46	90	61.174	ENSPFOG00000001079	rbm46	97	60.748	Poecilia_formosa
ENSDARG00000079452	rbm46	99	63.889	ENSPLAG00000004541	rbm46	95	64.338	Poecilia_latipinna
ENSDARG00000079452	rbm46	90	69.492	ENSPMEG00000015724	rbm46	94	68.737	Poecilia_mexicana
ENSDARG00000079452	rbm46	99	63.771	ENSPREG00000014464	rbm46	96	69.737	Poecilia_reticulata
ENSDARG00000079452	rbm46	99	64.205	ENSPPYG00000015144	RBM46	97	64.205	Pongo_abelii
ENSDARG00000079452	rbm46	99	58.979	ENSPCAG00000003110	RBM46	97	59.023	Procavia_capensis
ENSDARG00000079452	rbm46	99	63.396	ENSPCOG00000024347	RBM46	96	67.249	Propithecus_coquereli
ENSDARG00000079452	rbm46	99	63.962	ENSPVAG00000008376	RBM46	97	63.774	Pteropus_vampyrus
ENSDARG00000079452	rbm46	100	81.071	ENSPNAG00000025312	rbm46	100	81.071	Pygocentrus_nattereri
ENSDARG00000079452	rbm46	99	64.259	ENSRNOG00000025823	Rbm46	97	64.083	Rattus_norvegicus
ENSDARG00000079452	rbm46	88	68.928	ENSRBIG00000032583	RBM46	96	68.860	Rhinopithecus_bieti
ENSDARG00000079452	rbm46	88	68.709	ENSRROG00000044288	RBM46	96	68.640	Rhinopithecus_roxellana
ENSDARG00000079452	rbm46	99	63.842	ENSSBOG00000033028	RBM46	96	67.686	Saimiri_boliviensis_boliviensis
ENSDARG00000079452	rbm46	99	64.259	ENSSHAG00000012596	RBM46	97	64.259	Sarcophilus_harrisii
ENSDARG00000079452	rbm46	99	69.804	ENSSFOG00015000087	rbm46	98	68.992	Scleropages_formosus
ENSDARG00000079452	rbm46	87	65.169	ENSSMAG00000017042	rbm46	93	64.865	Scophthalmus_maximus
ENSDARG00000079452	rbm46	93	66.272	ENSSDUG00000020645	rbm46	89	70.241	Seriola_dumerili
ENSDARG00000079452	rbm46	99	63.894	ENSSARG00000006520	RBM46	97	63.567	Sorex_araneus
ENSDARG00000079452	rbm46	90	67.742	ENSSPUG00000004773	-	94	68.352	Sphenodon_punctatus
ENSDARG00000079452	rbm46	99	63.585	ENSSPUG00000012525	-	97	63.585	Sphenodon_punctatus
ENSDARG00000079452	rbm46	88	66.960	ENSSPAG00000013697	rbm46	96	66.234	Stegastes_partitus
ENSDARG00000079452	rbm46	88	67.896	ENSSSCG00000008994	RBM46	96	65.926	Sus_scrofa
ENSDARG00000079452	rbm46	87	66.593	ENSTGUG00000005307	RBM46	97	65.577	Taeniopygia_guttata
ENSDARG00000079452	rbm46	87	65.914	ENSTRUG00000004237	rbm46	91	64.758	Takifugu_rubripes
ENSDARG00000079452	rbm46	98	60.694	ENSTNIG00000008714	rbm46	99	60.000	Tetraodon_nigroviridis
ENSDARG00000079452	rbm46	99	63.068	ENSTBEG00000013949	RBM46	97	63.068	Tupaia_belangeri
ENSDARG00000079452	rbm46	99	64.259	ENSTTRG00000001239	RBM46	97	64.259	Tursiops_truncatus
ENSDARG00000079452	rbm46	99	63.894	ENSUAMG00000026593	RBM46	93	68.559	Ursus_americanus
ENSDARG00000079452	rbm46	99	64.083	ENSUMAG00000016442	RBM46	93	68.113	Ursus_maritimus
ENSDARG00000079452	rbm46	99	64.259	ENSVVUG00000024957	RBM46	96	68.490	Vulpes_vulpes
ENSDARG00000079452	rbm46	58	67.458	ENSXETG00000032067	-	79	66.780	Xenopus_tropicalis
ENSDARG00000079452	rbm46	99	59.038	ENSXETG00000022412	-	97	59.351	Xenopus_tropicalis
ENSDARG00000079452	rbm46	99	43.182	ENSXETG00000032344	-	98	44.112	Xenopus_tropicalis
ENSDARG00000079452	rbm46	88	65.525	ENSXMAG00000008237	rbm46	90	65.948	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0003729	mRNA binding	21873635.	IBA	Function
GO:0005575	cellular_component	-	ND	Component
GO:0005634	nucleus	21873635.	IBA	Component
GO:0008150	biological_process	-	ND	Process