EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000079578 (Gene tree)
Gene ID: 393229
Gene Symbol: rbpms2b
Alias: Hermes|rbpms2|zgc:55559|zgc:77170
Full Name: RNA binding protein%2C mRNA processing factor 2b
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 10996 bases
Position: chr7:48252638-48263633
Accession: ZDB-GENE-040426-741
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000026087	RRM_1	PF00076.22	9.6e-12	1	1
ENSDARP00000118336	RRM_1	PF00076.22	1e-11	1	1
ENSDARP00000122203	RRM_1	PF00076.22	1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000147968	-	871	-	ENSDARP00000122203	179 (aa)	-	E9QHK7
ENSDART00000134832	-	768	-	ENSDARP00000143130	80 (aa)	-	A0A1L1QZL3
ENSDART00000148273	-	317	-	ENSDARP00000122677	18 (aa)	-	E9QG56
ENSDART00000135671	-	832	-	-	- (aa)	-	-
ENSDART00000139279	-	502	-	-	- (aa)	-	-
ENSDART00000136708	-	730	-	-	- (aa)	-	-
ENSDART00000142370	-	764	-	ENSDARP00000118336	179 (aa)	-	E9QHK7
ENSDART00000006619	-	1911	XM_017356825	ENSDARP00000026087	200 (aa)	XP_017212314	Q7ZUL7

Gene Model

Click here to download ENSDARG00000079578's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000079578's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000079578	rbpms2b	98	93.590	ENSDARG00000045930	rbpms2a	100	91.500
ENSDARG00000079578	rbpms2b	70	87.500	ENSDARG00000099396	rbpms	100	59.551

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000079578	rbpms2b	93	85.484	ENSG00000166831	RBPMS2	100	80.000	Homo_sapiens
ENSDARG00000079578	rbpms2b	98	93.590	ENSAPOG00000007842	rbpms2b	100	91.000	Acanthochromis_polyacanthus
ENSDARG00000079578	rbpms2b	93	86.559	ENSAMEG00000002664	RBPMS2	89	86.096	Ailuropoda_melanoleuca
ENSDARG00000079578	rbpms2b	100	88.000	ENSACIG00000013696	rbpms2b	74	88.500	Amphilophus_citrinellus
ENSDARG00000079578	rbpms2b	98	92.308	ENSAOCG00000000105	rbpms2b	73	90.500	Amphiprion_ocellaris
ENSDARG00000079578	rbpms2b	98	92.308	ENSAPEG00000001705	rbpms2b	100	90.500	Amphiprion_percula
ENSDARG00000079578	rbpms2b	98	93.590	ENSATEG00000020326	rbpms2b	74	91.000	Anabas_testudineus
ENSDARG00000079578	rbpms2b	93	89.247	ENSAPLG00000004799	RBPMS2	90	89.785	Anas_platyrhynchos
ENSDARG00000079578	rbpms2b	75	98.333	ENSACAG00000012227	RBPMS2	100	92.593	Anolis_carolinensis
ENSDARG00000079578	rbpms2b	93	86.022	ENSANAG00000014652	RBPMS2	90	86.096	Aotus_nancymaae
ENSDARG00000079578	rbpms2b	98	93.590	ENSACLG00000012769	rbpms2b	74	91.000	Astatotilapia_calliptera
ENSDARG00000079578	rbpms2b	98	97.436	ENSAMXG00000036507	rbpms2a	100	90.732	Astyanax_mexicanus
ENSDARG00000079578	rbpms2b	100	95.556	ENSAMXG00000037525	rbpms2b	100	95.025	Astyanax_mexicanus
ENSDARG00000079578	rbpms2b	93	87.097	ENSBTAG00000011037	RBPMS2	88	87.166	Bos_taurus
ENSDARG00000079578	rbpms2b	78	66.129	ENSBTAG00000049268	-	67	52.469	Bos_taurus
ENSDARG00000079578	rbpms2b	93	85.484	ENSCJAG00000005200	RBPMS2	93	82.143	Callithrix_jacchus
ENSDARG00000079578	rbpms2b	94	86.631	ENSCAFG00000017098	RBPMS2	87	86.631	Canis_familiaris
ENSDARG00000079578	rbpms2b	94	86.631	ENSCAFG00020008908	RBPMS2	87	86.631	Canis_lupus_dingo
ENSDARG00000079578	rbpms2b	91	85.714	ENSCHIG00000024439	RBPMS2	91	86.264	Capra_hircus
ENSDARG00000079578	rbpms2b	66	73.585	ENSCHIG00000009400	-	93	72.973	Capra_hircus
ENSDARG00000079578	rbpms2b	91	85.714	ENSTSYG00000008996	-	84	85.714	Carlito_syrichta
ENSDARG00000079578	rbpms2b	87	77.011	ENSTSYG00000033527	-	87	77.143	Carlito_syrichta
ENSDARG00000079578	rbpms2b	90	83.851	ENSCAPG00000015689	RBPMS2	100	81.319	Cavia_aperea
ENSDARG00000079578	rbpms2b	90	83.851	ENSCPOG00000007695	RBPMS2	100	81.319	Cavia_porcellus
ENSDARG00000079578	rbpms2b	93	86.022	ENSCCAG00000036496	RBPMS2	93	82.653	Cebus_capucinus
ENSDARG00000079578	rbpms2b	93	85.484	ENSCATG00000042116	RBPMS2	94	81.407	Cercocebus_atys
ENSDARG00000079578	rbpms2b	91	82.967	ENSCLAG00000016082	RBPMS2	100	84.066	Chinchilla_lanigera
ENSDARG00000079578	rbpms2b	92	83.607	ENSCSAG00000012562	RBPMS2	83	85.792	Chlorocebus_sabaeus
ENSDARG00000079578	rbpms2b	99	85.787	ENSCPBG00000006048	RBPMS2	97	88.068	Chrysemys_picta_bellii
ENSDARG00000079578	rbpms2b	93	85.484	ENSCGRG00001014627	Rbpms2	89	85.484	Cricetulus_griseus_chok1gshd
ENSDARG00000079578	rbpms2b	91	85.165	ENSCGRG00000005899	Rbpms2	100	85.165	Cricetulus_griseus_crigri
ENSDARG00000079578	rbpms2b	99	93.671	ENSCSEG00000008627	rbpms2b	50	91.250	Cynoglossus_semilaevis
ENSDARG00000079578	rbpms2b	98	94.872	ENSCVAG00000004878	rbpms2b	77	91.500	Cyprinodon_variegatus
ENSDARG00000079578	rbpms2b	96	83.770	ENSDNOG00000048895	RBPMS2	93	83.770	Dasypus_novemcinctus
ENSDARG00000079578	rbpms2b	80	87.500	ENSDORG00000023373	-	99	72.165	Dipodomys_ordii
ENSDARG00000079578	rbpms2b	94	82.447	ENSDORG00000004025	-	100	82.447	Dipodomys_ordii
ENSDARG00000079578	rbpms2b	91	82.320	ENSETEG00000010176	RBPMS2	94	83.425	Echinops_telfairi
ENSDARG00000079578	rbpms2b	96	66.667	ENSEBUG00000005004	-	98	50.990	Eptatretus_burgeri
ENSDARG00000079578	rbpms2b	69	87.273	ENSEBUG00000004204	-	70	85.965	Eptatretus_burgeri
ENSDARG00000079578	rbpms2b	79	92.063	ENSEBUG00000000297	RBPMS2	93	76.882	Eptatretus_burgeri
ENSDARG00000079578	rbpms2b	95	80.263	ENSEBUG00000012768	RBPMS2	93	73.333	Eptatretus_burgeri
ENSDARG00000079578	rbpms2b	93	87.634	ENSEASG00005006523	RBPMS2	87	87.634	Equus_asinus_asinus
ENSDARG00000079578	rbpms2b	91	87.363	ENSECAG00000015345	RBPMS2	84	87.363	Equus_caballus
ENSDARG00000079578	rbpms2b	100	93.333	ENSELUG00000023770	RBPMS	100	93.671	Esox_lucius
ENSDARG00000079578	rbpms2b	99	91.573	ENSELUG00000021784	rbpms2b	96	92.208	Esox_lucius
ENSDARG00000079578	rbpms2b	93	87.634	ENSFCAG00000032451	RBPMS2	89	87.166	Felis_catus
ENSDARG00000079578	rbpms2b	99	84.772	ENSFALG00000009836	RBPMS2	99	84.848	Ficedula_albicollis
ENSDARG00000079578	rbpms2b	91	83.516	ENSFDAG00000016154	RBPMS2	100	84.615	Fukomys_damarensis
ENSDARG00000079578	rbpms2b	98	94.872	ENSFHEG00000014766	rbpms2b	76	91.500	Fundulus_heteroclitus
ENSDARG00000079578	rbpms2b	91	92.593	ENSGMOG00000008502	rbpms2b	100	91.257	Gadus_morhua
ENSDARG00000079578	rbpms2b	99	85.787	ENSGALG00000030988	RBPMS2	98	86.294	Gallus_gallus
ENSDARG00000079578	rbpms2b	100	78.000	ENSGAFG00000002978	rbpms2b	100	78.500	Gambusia_affinis
ENSDARG00000079578	rbpms2b	92	90.164	ENSGACG00000017472	rbpms2b	100	90.710	Gasterosteus_aculeatus
ENSDARG00000079578	rbpms2b	99	85.279	ENSGAGG00000020044	RBPMS2	97	87.500	Gopherus_agassizii
ENSDARG00000079578	rbpms2b	91	85.714	ENSGGOG00000008984	RBPMS2	100	86.264	Gorilla_gorilla
ENSDARG00000079578	rbpms2b	99	93.671	ENSHBUG00000009135	rbpms2b	74	91.000	Haplochromis_burtoni
ENSDARG00000079578	rbpms2b	99	77.451	ENSHGLG00000008504	RBPMS2	99	78.431	Heterocephalus_glaber_female
ENSDARG00000079578	rbpms2b	91	82.967	ENSHGLG00100019122	RBPMS2	100	84.066	Heterocephalus_glaber_male
ENSDARG00000079578	rbpms2b	98	93.590	ENSHCOG00000018429	rbpms2b	100	91.000	Hippocampus_comes
ENSDARG00000079578	rbpms2b	100	96.648	ENSIPUG00000020981	RBPMS	99	96.703	Ictalurus_punctatus
ENSDARG00000079578	rbpms2b	98	94.872	ENSIPUG00000014032	RBPMS	100	92.500	Ictalurus_punctatus
ENSDARG00000079578	rbpms2b	93	87.634	ENSSTOG00000010055	RBPMS2	92	85.340	Ictidomys_tridecemlineatus
ENSDARG00000079578	rbpms2b	99	79.293	ENSJJAG00000001664	Rbpms2	98	79.798	Jaculus_jaculus
ENSDARG00000079578	rbpms2b	100	89.500	ENSKMAG00000002005	rbpms2b	69	90.000	Kryptolebias_marmoratus
ENSDARG00000079578	rbpms2b	77	92.701	ENSLBEG00000017287	rbpms2b	74	90.683	Labrus_bergylta
ENSDARG00000079578	rbpms2b	94	85.561	ENSLACG00000016999	RBPMS2	93	86.096	Latimeria_chalumnae
ENSDARG00000079578	rbpms2b	99	88.442	ENSLOCG00000015018	rbpms2b	99	88.945	Lepisosteus_oculatus
ENSDARG00000079578	rbpms2b	92	83.607	ENSLAFG00000018725	RBPMS2	100	84.699	Loxodonta_africana
ENSDARG00000079578	rbpms2b	93	84.946	ENSMFAG00000045343	RBPMS2	94	80.905	Macaca_fascicularis
ENSDARG00000079578	rbpms2b	93	84.946	ENSMMUG00000013270	RBPMS2	94	80.905	Macaca_mulatta
ENSDARG00000079578	rbpms2b	93	84.946	ENSMNEG00000019330	RBPMS2	94	80.905	Macaca_nemestrina
ENSDARG00000079578	rbpms2b	91	85.165	ENSMLEG00000035922	RBPMS2	100	85.714	Mandrillus_leucophaeus
ENSDARG00000079578	rbpms2b	100	89.000	ENSMAMG00000014149	rbpms2b	99	90.476	Mastacembelus_armatus
ENSDARG00000079578	rbpms2b	98	93.590	ENSMZEG00005013727	rbpms2b	100	91.000	Maylandia_zebra
ENSDARG00000079578	rbpms2b	97	87.047	ENSMGAG00000001128	RBPMS2	96	87.565	Meleagris_gallopavo
ENSDARG00000079578	rbpms2b	93	84.946	ENSMAUG00000019407	Rbpms2	96	85.484	Mesocricetus_auratus
ENSDARG00000079578	rbpms2b	94	85.027	ENSMICG00000029953	RBPMS2	88	85.561	Microcebus_murinus
ENSDARG00000079578	rbpms2b	95	81.579	ENSMOCG00000021603	Rbpms2	94	82.105	Microtus_ochrogaster
ENSDARG00000079578	rbpms2b	97	88.205	ENSMMOG00000002240	rbpms2b	95	88.718	Mola_mola
ENSDARG00000079578	rbpms2b	93	89.785	ENSMODG00000010487	RBPMS2	88	90.374	Monodelphis_domestica
ENSDARG00000079578	rbpms2b	98	91.026	ENSMALG00000014621	rbpms2b	66	89.157	Monopterus_albus
ENSDARG00000079578	rbpms2b	92	86.228	MGP_CAROLIEiJ_G0032367	Rbpms2	91	85.106	Mus_caroli
ENSDARG00000079578	rbpms2b	92	86.228	ENSMUSG00000032387	Rbpms2	91	85.106	Mus_musculus
ENSDARG00000079578	rbpms2b	93	86.022	MGP_PahariEiJ_G0015232	Rbpms2	89	86.022	Mus_pahari
ENSDARG00000079578	rbpms2b	92	86.228	MGP_SPRETEiJ_G0033506	Rbpms2	91	85.106	Mus_spretus
ENSDARG00000079578	rbpms2b	92	82.514	ENSMPUG00000000553	RBPMS2	90	85.246	Mustela_putorius_furo
ENSDARG00000079578	rbpms2b	80	89.062	ENSMLUG00000013394	RBPMS2	83	84.118	Myotis_lucifugus
ENSDARG00000079578	rbpms2b	93	84.492	ENSNGAG00000023569	Rbpms2	91	87.701	Nannospalax_galili
ENSDARG00000079578	rbpms2b	98	92.308	ENSNBRG00000019943	rbpms2b	74	90.500	Neolamprologus_brichardi
ENSDARG00000079578	rbpms2b	89	83.648	ENSOPRG00000013668	RBPMS2	100	82.317	Ochotona_princeps
ENSDARG00000079578	rbpms2b	91	82.418	ENSODEG00000016172	RBPMS2	95	83.516	Octodon_degus
ENSDARG00000079578	rbpms2b	98	93.590	ENSONIG00000005770	rbpms2b	100	91.000	Oreochromis_niloticus
ENSDARG00000079578	rbpms2b	79	92.063	ENSOANG00000011802	-	80	92.105	Ornithorhynchus_anatinus
ENSDARG00000079578	rbpms2b	93	86.559	ENSOCUG00000010388	RBPMS2	93	82.653	Oryctolagus_cuniculus
ENSDARG00000079578	rbpms2b	98	93.590	ENSORLG00000027223	rbpms2b	75	91.000	Oryzias_latipes
ENSDARG00000079578	rbpms2b	98	93.590	ENSORLG00020001166	rbpms2b	75	91.000	Oryzias_latipes_hni
ENSDARG00000079578	rbpms2b	98	92.308	ENSORLG00015001749	rbpms2b	75	90.500	Oryzias_latipes_hsok
ENSDARG00000079578	rbpms2b	98	93.590	ENSOMEG00000006495	rbpms2b	100	85.000	Oryzias_melastigma
ENSDARG00000079578	rbpms2b	95	81.053	ENSOGAG00000026017	RBPMS2	93	81.579	Otolemur_garnettii
ENSDARG00000079578	rbpms2b	94	85.027	ENSOARG00000020727	RBPMS2	89	85.561	Ovis_aries
ENSDARG00000079578	rbpms2b	91	85.714	ENSPPAG00000024456	RBPMS2	100	86.264	Pan_paniscus
ENSDARG00000079578	rbpms2b	93	87.634	ENSPPRG00000014944	RBPMS2	89	87.166	Panthera_pardus
ENSDARG00000079578	rbpms2b	91	87.363	ENSPTIG00000017879	RBPMS2	86	87.363	Panthera_tigris_altaica
ENSDARG00000079578	rbpms2b	93	86.022	ENSPTRG00000007165	RBPMS2	94	81.910	Pan_troglodytes
ENSDARG00000079578	rbpms2b	93	85.484	ENSPANG00000016754	RBPMS2	88	86.022	Papio_anubis
ENSDARG00000079578	rbpms2b	98	91.026	ENSPKIG00000012634	rbpms2b	100	87.000	Paramormyrops_kingsleyae
ENSDARG00000079578	rbpms2b	98	94.872	ENSPKIG00000022509	rbpms2a	100	91.000	Paramormyrops_kingsleyae
ENSDARG00000079578	rbpms2b	91	89.560	ENSPSIG00000013115	RBPMS2	100	90.110	Pelodiscus_sinensis
ENSDARG00000079578	rbpms2b	88	90.857	ENSPMGG00000021154	rbpms2b	88	91.429	Periophthalmus_magnuspinnatus
ENSDARG00000079578	rbpms2b	93	89.247	ENSPCIG00000029447	RBPMS2	99	83.902	Phascolarctos_cinereus
ENSDARG00000079578	rbpms2b	98	94.872	ENSPFOG00000016067	rbpms2b	100	91.500	Poecilia_formosa
ENSDARG00000079578	rbpms2b	98	94.872	ENSPLAG00000008831	rbpms2b	100	91.500	Poecilia_latipinna
ENSDARG00000079578	rbpms2b	98	94.872	ENSPMEG00000007868	rbpms2b	100	91.500	Poecilia_mexicana
ENSDARG00000079578	rbpms2b	98	94.872	ENSPREG00000005953	rbpms2b	100	89.268	Poecilia_reticulata
ENSDARG00000079578	rbpms2b	93	79.255	ENSPPYG00000006553	-	83	81.383	Pongo_abelii
ENSDARG00000079578	rbpms2b	91	81.868	ENSPCAG00000015797	RBPMS2	100	83.516	Procavia_capensis
ENSDARG00000079578	rbpms2b	93	84.409	ENSPCOG00000023778	RBPMS2	94	80.905	Propithecus_coquereli
ENSDARG00000079578	rbpms2b	91	85.714	ENSPVAG00000016622	RBPMS2	100	85.714	Pteropus_vampyrus
ENSDARG00000079578	rbpms2b	98	93.590	ENSPNYG00000010761	rbpms2b	74	91.000	Pundamilia_nyererei
ENSDARG00000079578	rbpms2b	100	98.324	ENSPNAG00000004816	rbpms2b	100	97.500	Pygocentrus_nattereri
ENSDARG00000079578	rbpms2b	98	97.436	ENSPNAG00000027343	rbpms2a	100	93.000	Pygocentrus_nattereri
ENSDARG00000079578	rbpms2b	93	86.559	ENSRNOG00000015896	Rbpms2	88	86.559	Rattus_norvegicus
ENSDARG00000079578	rbpms2b	92	84.699	ENSRROG00000006473	RBPMS2	90	85.246	Rhinopithecus_roxellana
ENSDARG00000079578	rbpms2b	91	85.714	ENSSBOG00000020118	RBPMS2	100	86.264	Saimiri_boliviensis_boliviensis
ENSDARG00000079578	rbpms2b	91	89.560	ENSSHAG00000007448	RBPMS2	100	90.110	Sarcophilus_harrisii
ENSDARG00000079578	rbpms2b	98	92.308	ENSSFOG00015010476	rbpms2b	99	89.011	Scleropages_formosus
ENSDARG00000079578	rbpms2b	98	96.154	ENSSFOG00015022055	rbpms2	100	93.000	Scleropages_formosus
ENSDARG00000079578	rbpms2b	100	82.710	ENSSMAG00000009743	rbpms2b	71	85.047	Scophthalmus_maximus
ENSDARG00000079578	rbpms2b	99	93.671	ENSSLDG00000023070	rbpms2b	73	88.780	Seriola_lalandi_dorsalis
ENSDARG00000079578	rbpms2b	94	89.305	ENSSPUG00000006378	RBPMS2	98	85.787	Sphenodon_punctatus
ENSDARG00000079578	rbpms2b	99	93.671	ENSSPAG00000001979	rbpms2b	100	91.000	Stegastes_partitus
ENSDARG00000079578	rbpms2b	93	87.952	ENSSSCG00000004549	RBPMS2	88	86.096	Sus_scrofa
ENSDARG00000079578	rbpms2b	79	93.662	ENSTGUG00000004722	RBPMS2	100	92.593	Taeniopygia_guttata
ENSDARG00000079578	rbpms2b	98	93.590	ENSTRUG00000025375	rbpms2b	74	91.000	Takifugu_rubripes
ENSDARG00000079578	rbpms2b	93	83.333	ENSTTRG00000011840	RBPMS2	91	85.561	Tursiops_truncatus
ENSDARG00000079578	rbpms2b	93	84.946	ENSUMAG00000012614	RBPMS2	87	84.946	Ursus_maritimus
ENSDARG00000079578	rbpms2b	99	81.407	ENSVVUG00000013801	RBPMS2	98	81.407	Vulpes_vulpes
ENSDARG00000079578	rbpms2b	97	88.601	ENSXCOG00000000567	rbpms2b	97	89.119	Xiphophorus_couchianus
ENSDARG00000079578	rbpms2b	98	94.872	ENSXMAG00000001210	rbpms2b	100	91.500	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000398	mRNA splicing, via spliceosome	21873635.	IBA	Process
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0003729	mRNA binding	24496621.	IDA	Function
GO:0005515	protein binding	24496621.	IPI	Function
GO:0031290	retinal ganglion cell axon guidance	27974617.	IGI	Process
GO:0035614	snRNA stem-loop binding	21873635.	IBA	Function
GO:0042803	protein homodimerization activity	-	IEA	Function
GO:0048813	dendrite morphogenesis	23785151.	IGI	Process
GO:0090259	regulation of retinal ganglion cell axon guidance	27974617.	IGI	Process