EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000079672 (Gene tree)
Gene ID: 568741
Gene Symbol: efl1
Alias: eftud1
Full Name: elongation factor like GTPase 1
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 230252 bases
Position: chr7:12140955-12371206
Accession: ZDB-GENE-130103-6
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000137907	GTP_EFTU	PF00009.27	1.9e-60	1	1
ENSDARP00000137907	GTP_EFTU_D2	PF03144.25	1.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000161679	-	8934	XM_692092	ENSDARP00000137907	1133 (aa)	XP_697184	A0A0R4ITN4

Gene Model

Click here to download ENSDARG00000079672's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000079672's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000079672	efl1	58	33.796	ENSDARG00000012261	eftud2	84	33.796
ENSDARG00000079672	efl1	92	35.398	ENSDARG00000042065	eef2a.2	98	35.398
ENSDARG00000079672	efl1	92	35.841	ENSDARG00000042094	eef2a.1	99	35.841
ENSDARG00000079672	efl1	92	37.004	ENSDARG00000100371	eef2b	98	37.004

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000079672	efl1	98	70.384	ENSG00000140598	EFL1	97	76.190	Homo_sapiens
ENSDARG00000079672	efl1	98	76.699	ENSAPOG00000000188	efl1	100	76.849	Acanthochromis_polyacanthus
ENSDARG00000079672	efl1	98	69.442	ENSAMEG00000006031	EFL1	99	69.531	Ailuropoda_melanoleuca
ENSDARG00000079672	efl1	98	76.596	ENSACIG00000017802	efl1	100	77.128	Amphilophus_citrinellus
ENSDARG00000079672	efl1	98	75.642	ENSAOCG00000023933	efl1	100	75.642	Amphiprion_ocellaris
ENSDARG00000079672	efl1	98	76.476	ENSAPEG00000000262	efl1	100	76.564	Amphiprion_percula
ENSDARG00000079672	efl1	98	76.011	ENSATEG00000012373	efl1	100	76.081	Anabas_testudineus
ENSDARG00000079672	efl1	98	73.689	ENSAPLG00000011147	EFL1	99	73.375	Anas_platyrhynchos
ENSDARG00000079672	efl1	98	72.582	ENSACAG00000011040	EFL1	99	72.518	Anolis_carolinensis
ENSDARG00000079672	efl1	98	70.294	ENSANAG00000027459	EFL1	99	70.384	Aotus_nancymaae
ENSDARG00000079672	efl1	98	76.726	ENSACLG00000025780	efl1	100	76.705	Astatotilapia_calliptera
ENSDARG00000079672	efl1	98	79.842	ENSAMXG00000019529	efl1	100	80.385	Astyanax_mexicanus
ENSDARG00000079672	efl1	98	69.876	ENSBTAG00000003410	EFL1	99	69.876	Bos_taurus
ENSDARG00000079672	efl1	92	37.767	WBGene00010732	K10C3.5	93	57.658	Caenorhabditis_elegans
ENSDARG00000079672	efl1	84	95.238	ENSCJAG00000015607	-	97	95.161	Callithrix_jacchus
ENSDARG00000079672	efl1	98	69.088	ENSCAFG00000013671	EFL1	99	69.353	Canis_familiaris
ENSDARG00000079672	efl1	98	69.638	ENSCHIG00000001883	EFL1	99	69.638	Capra_hircus
ENSDARG00000079672	efl1	98	70.186	ENSTSYG00000000348	EFL1	100	70.275	Carlito_syrichta
ENSDARG00000079672	efl1	98	59.191	ENSCAPG00000017944	EFL1	99	59.191	Cavia_aperea
ENSDARG00000079672	efl1	98	68.911	ENSCPOG00000001924	EFL1	99	68.999	Cavia_porcellus
ENSDARG00000079672	efl1	98	70.116	ENSCCAG00000034450	EFL1	99	70.205	Cebus_capucinus
ENSDARG00000079672	efl1	98	69.848	ENSCATG00000031678	-	99	69.938	Cercocebus_atys
ENSDARG00000079672	efl1	98	68.596	ENSCLAG00000010155	EFL1	99	68.911	Chinchilla_lanigera
ENSDARG00000079672	efl1	98	70.027	ENSCSAG00000015165	EFL1	99	70.116	Chlorocebus_sabaeus
ENSDARG00000079672	efl1	71	69.145	ENSCHOG00000014029	EFL1	78	69.145	Choloepus_hoffmanni
ENSDARG00000079672	efl1	98	73.398	ENSCPBG00000017638	EFL1	99	73.374	Chrysemys_picta_bellii
ENSDARG00000079672	efl1	98	60.870	ENSCSAVG00000001787	-	99	62.014	Ciona_savignyi
ENSDARG00000079672	efl1	98	70.205	ENSCANG00000038093	EFL1	99	70.294	Colobus_angolensis_palliatus
ENSDARG00000079672	efl1	98	65.442	ENSCGRG00001010826	Efl1	99	65.529	Cricetulus_griseus_chok1gshd
ENSDARG00000079672	efl1	98	68.591	ENSCGRG00000003273	Efl1	99	68.679	Cricetulus_griseus_crigri
ENSDARG00000079672	efl1	98	72.163	ENSCSEG00000005856	efl1	99	72.099	Cynoglossus_semilaevis
ENSDARG00000079672	efl1	92	72.440	ENSCVAG00000011863	efl1	95	72.632	Cyprinodon_variegatus
ENSDARG00000079672	efl1	98	69.408	ENSDNOG00000006097	EFL1	99	69.496	Dasypus_novemcinctus
ENSDARG00000079672	efl1	98	68.899	ENSDORG00000000719	Efl1	99	69.081	Dipodomys_ordii
ENSDARG00000079672	efl1	98	46.126	FBgn0053158	CG33158	99	46.037	Drosophila_melanogaster
ENSDARG00000079672	efl1	86	66.297	ENSETEG00000004309	EFL1	95	66.519	Echinops_telfairi
ENSDARG00000079672	efl1	82	69.142	ENSEBUG00000010738	efl1	100	69.142	Eptatretus_burgeri
ENSDARG00000079672	efl1	98	70.907	ENSEASG00005007108	EFL1	99	70.588	Equus_asinus_asinus
ENSDARG00000079672	efl1	94	70.419	ENSECAG00000016354	EFL1	99	70.084	Equus_caballus
ENSDARG00000079672	efl1	68	71.470	ENSEEUG00000006326	EFL1	79	71.470	Erinaceus_europaeus
ENSDARG00000079672	efl1	98	71.441	ENSELUG00000002520	efl1	98	80.952	Esox_lucius
ENSDARG00000079672	efl1	98	71.008	ENSFCAG00000007741	EFL1	99	71.008	Felis_catus
ENSDARG00000079672	efl1	98	72.432	ENSFALG00000011103	EFL1	99	72.232	Ficedula_albicollis
ENSDARG00000079672	efl1	98	69.400	ENSFDAG00000009023	EFL1	99	69.442	Fukomys_damarensis
ENSDARG00000079672	efl1	98	73.932	ENSFHEG00000017795	efl1	100	73.932	Fundulus_heteroclitus
ENSDARG00000079672	efl1	98	72.670	ENSGMOG00000005041	efl1	100	72.401	Gadus_morhua
ENSDARG00000079672	efl1	98	73.486	ENSGALG00000006225	EFL1	99	73.486	Gallus_gallus
ENSDARG00000079672	efl1	98	73.582	ENSGACG00000012495	efl1	100	73.801	Gasterosteus_aculeatus
ENSDARG00000079672	efl1	98	74.100	ENSGAGG00000022841	EFL1	99	73.814	Gopherus_agassizii
ENSDARG00000079672	efl1	96	65.508	ENSGGOG00000005017	EFL1	100	65.599	Gorilla_gorilla
ENSDARG00000079672	efl1	98	76.984	ENSHBUG00000022667	efl1	100	76.787	Haplochromis_burtoni
ENSDARG00000079672	efl1	98	66.902	ENSHGLG00000011798	EFL1	99	66.933	Heterocephalus_glaber_female
ENSDARG00000079672	efl1	98	69.373	ENSHGLG00100010319	EFTUD1	94	83.333	Heterocephalus_glaber_male
ENSDARG00000079672	efl1	98	75.618	ENSHCOG00000007325	efl1	100	75.442	Hippocampus_comes
ENSDARG00000079672	efl1	98	79.535	ENSIPUG00000023360	EFTUD1	100	79.535	Ictalurus_punctatus
ENSDARG00000079672	efl1	98	66.549	ENSSTOG00000022945	EFL1	100	66.549	Ictidomys_tridecemlineatus
ENSDARG00000079672	efl1	98	69.081	ENSJJAG00000018598	Efl1	99	68.993	Jaculus_jaculus
ENSDARG00000079672	efl1	98	75.175	ENSLBEG00000015269	efl1	100	74.780	Labrus_bergylta
ENSDARG00000079672	efl1	98	73.947	ENSLACG00000016121	EFL1	100	73.689	Latimeria_chalumnae
ENSDARG00000079672	efl1	99	77.377	ENSLOCG00000012862	efl1	99	77.513	Lepisosteus_oculatus
ENSDARG00000079672	efl1	98	69.142	ENSLAFG00000012504	EFL1	100	69.027	Loxodonta_africana
ENSDARG00000079672	efl1	98	70.205	ENSMFAG00000032657	-	99	70.294	Macaca_fascicularis
ENSDARG00000079672	efl1	98	68.139	ENSMMUG00000023353	EFL1	99	68.225	Macaca_mulatta
ENSDARG00000079672	efl1	98	70.116	ENSMNEG00000041671	-	99	70.205	Macaca_nemestrina
ENSDARG00000079672	efl1	98	70.116	ENSMLEG00000033735	EFL1	99	70.205	Mandrillus_leucophaeus
ENSDARG00000079672	efl1	98	76.413	ENSMAMG00000011336	efl1	100	76.148	Mastacembelus_armatus
ENSDARG00000079672	efl1	98	76.631	ENSMZEG00005003012	efl1	100	76.787	Maylandia_zebra
ENSDARG00000079672	efl1	98	73.805	ENSMGAG00000007991	EFL1	99	73.759	Meleagris_gallopavo
ENSDARG00000079672	efl1	98	68.947	ENSMAUG00000010709	Efl1	99	69.035	Mesocricetus_auratus
ENSDARG00000079672	efl1	98	69.780	ENSMICG00000027853	EFL1	94	75.377	Microcebus_murinus
ENSDARG00000079672	efl1	98	68.130	ENSMOCG00000007470	Efl1	99	68.584	Microtus_ochrogaster
ENSDARG00000079672	efl1	98	69.584	ENSMMOG00000015370	efl1	100	69.893	Mola_mola
ENSDARG00000079672	efl1	98	69.577	ENSMODG00000019386	EFL1	100	69.665	Monodelphis_domestica
ENSDARG00000079672	efl1	98	74.934	ENSMALG00000018810	efl1	100	74.802	Monopterus_albus
ENSDARG00000079672	efl1	98	69.115	MGP_CAROLIEiJ_G0029936	Efl1	98	79.253	Mus_caroli
ENSDARG00000079672	efl1	98	68.684	ENSMUSG00000038563	Efl1	99	78.879	Mus_musculus
ENSDARG00000079672	efl1	98	68.426	MGP_PahariEiJ_G0013157	Efl1	99	79.310	Mus_pahari
ENSDARG00000079672	efl1	97	75.556	MGP_SPRETEiJ_G0031038	Efl1	99	75.556	Mus_spretus
ENSDARG00000079672	efl1	98	68.110	ENSMPUG00000015494	EFL1	99	68.375	Mustela_putorius_furo
ENSDARG00000079672	efl1	98	69.454	ENSNGAG00000017740	Efl1	99	69.770	Nannospalax_galili
ENSDARG00000079672	efl1	91	68.942	ENSNLEG00000010679	EFL1	99	69.038	Nomascus_leucogenys
ENSDARG00000079672	efl1	61	75.472	ENSMEUG00000012049	-	69	75.472	Notamacropus_eugenii
ENSDARG00000079672	efl1	61	65.854	ENSOPRG00000012488	-	63	65.854	Ochotona_princeps
ENSDARG00000079672	efl1	98	68.640	ENSODEG00000016193	EFL1	83	85.714	Octodon_degus
ENSDARG00000079672	efl1	98	76.408	ENSONIG00000003394	efl1	100	76.564	Oreochromis_niloticus
ENSDARG00000079672	efl1	98	69.813	ENSOCUG00000012163	EFL1	99	69.902	Oryctolagus_cuniculus
ENSDARG00000079672	efl1	62	68.519	ENSORLG00000020390	efl1	100	68.376	Oryzias_latipes
ENSDARG00000079672	efl1	94	80.342	ENSORLG00015012031	efl1	100	73.197	Oryzias_latipes_hsok
ENSDARG00000079672	efl1	98	74.309	ENSOMEG00000022784	efl1	100	74.309	Oryzias_melastigma
ENSDARG00000079672	efl1	98	69.550	ENSOARG00000014452	EFL1	99	69.550	Ovis_aries
ENSDARG00000079672	efl1	98	65.923	ENSPPAG00000039672	EFL1	99	66.012	Pan_paniscus
ENSDARG00000079672	efl1	98	71.008	ENSPPRG00000002193	EFL1	99	71.276	Panthera_pardus
ENSDARG00000079672	efl1	98	70.651	ENSPTIG00000007053	EFL1	99	71.097	Panthera_tigris_altaica
ENSDARG00000079672	efl1	98	70.205	ENSPTRG00000007374	EFL1	99	70.294	Pan_troglodytes
ENSDARG00000079672	efl1	98	70.116	ENSPANG00000015635	-	98	70.205	Papio_anubis
ENSDARG00000079672	efl1	98	79.151	ENSPKIG00000018456	efl1	99	76.476	Paramormyrops_kingsleyae
ENSDARG00000079672	efl1	98	73.357	ENSPSIG00000007790	EFL1	99	72.807	Pelodiscus_sinensis
ENSDARG00000079672	efl1	91	65.266	ENSPMAG00000002026	efl1	99	65.173	Petromyzon_marinus
ENSDARG00000079672	efl1	98	69.806	ENSPCIG00000004372	EFL1	100	69.373	Phascolarctos_cinereus
ENSDARG00000079672	efl1	98	75.111	ENSPFOG00000018687	efl1	100	74.911	Poecilia_formosa
ENSDARG00000079672	efl1	98	75.200	ENSPLAG00000001988	efl1	100	75.000	Poecilia_latipinna
ENSDARG00000079672	efl1	98	75.245	ENSPMEG00000000402	efl1	100	75.134	Poecilia_mexicana
ENSDARG00000079672	efl1	98	75.267	ENSPREG00000022085	efl1	100	75.267	Poecilia_reticulata
ENSDARG00000079672	efl1	98	70.294	ENSPPYG00000006724	EFL1	99	70.384	Pongo_abelii
ENSDARG00000079672	efl1	98	69.670	ENSPVAG00000003189	EFL1	99	69.759	Pteropus_vampyrus
ENSDARG00000079672	efl1	98	69.319	ENSPNYG00000019406	efl1	100	69.462	Pundamilia_nyererei
ENSDARG00000079672	efl1	98	81.634	ENSPNAG00000012104	efl1	100	81.602	Pygocentrus_nattereri
ENSDARG00000079672	efl1	98	69.654	ENSRNOG00000032723	Efl1	99	69.654	Rattus_norvegicus
ENSDARG00000079672	efl1	98	70.116	ENSRBIG00000040576	EFL1	99	70.205	Rhinopithecus_bieti
ENSDARG00000079672	efl1	98	68.025	ENSRROG00000031475	EFL1	100	68.113	Rhinopithecus_roxellana
ENSDARG00000079672	efl1	95	48.734	YNL163C	RIA1	89	48.734	Saccharomyces_cerevisiae
ENSDARG00000079672	efl1	98	70.205	ENSSBOG00000018280	EFL1	99	70.294	Saimiri_boliviensis_boliviensis
ENSDARG00000079672	efl1	98	66.550	ENSSHAG00000018863	EFL1	100	66.579	Sarcophilus_harrisii
ENSDARG00000079672	efl1	98	78.484	ENSSFOG00015016244	efl1	100	78.378	Scleropages_formosus
ENSDARG00000079672	efl1	98	75.398	ENSSMAG00000016928	efl1	100	75.044	Scophthalmus_maximus
ENSDARG00000079672	efl1	98	76.077	ENSSDUG00000013271	efl1	100	76.325	Seriola_dumerili
ENSDARG00000079672	efl1	98	76.413	ENSSLDG00000014655	efl1	100	76.413	Seriola_lalandi_dorsalis
ENSDARG00000079672	efl1	98	73.100	ENSSPUG00000000941	EFL1	100	73.013	Sphenodon_punctatus
ENSDARG00000079672	efl1	98	77.562	ENSSPAG00000011885	efl1	100	77.229	Stegastes_partitus
ENSDARG00000079672	efl1	98	69.947	ENSSSCG00000001792	EFL1	99	69.858	Sus_scrofa
ENSDARG00000079672	efl1	98	72.582	ENSTGUG00000007850	EFL1	99	72.582	Taeniopygia_guttata
ENSDARG00000079672	efl1	98	66.401	ENSTNIG00000003399	efl1	100	66.223	Tetraodon_nigroviridis
ENSDARG00000079672	efl1	71	78.750	ENSTBEG00000011804	EFL1	78	78.750	Tupaia_belangeri
ENSDARG00000079672	efl1	98	69.422	ENSTTRG00000011243	EFL1	99	69.608	Tursiops_truncatus
ENSDARG00000079672	efl1	98	69.088	ENSUAMG00000022106	EFL1	99	69.088	Ursus_americanus
ENSDARG00000079672	efl1	98	68.816	ENSUMAG00000010303	EFL1	99	68.999	Ursus_maritimus
ENSDARG00000079672	efl1	87	80.833	ENSVPAG00000005735	EFL1	89	80.833	Vicugna_pacos
ENSDARG00000079672	efl1	98	69.170	ENSVVUG00000004967	EFL1	99	69.353	Vulpes_vulpes
ENSDARG00000079672	efl1	98	73.944	ENSXETG00000015701	EFL1	100	73.680	Xenopus_tropicalis
ENSDARG00000079672	efl1	98	75.311	ENSXMAG00000023705	efl1	100	75.512	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003924	GTPase activity	21873635.	IBA	Function
GO:0003924	GTPase activity	-	IEA	Function
GO:0005525	GTP binding	-	IEA	Function
GO:0005829	cytosol	21873635.	IBA	Component
GO:0042256	mature ribosome assembly	21873635.	IBA	Process
GO:0043022	ribosome binding	21873635.	IBA	Function
GO:1990904	ribonucleoprotein complex	21873635.	IBA	Component