EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000079688 (Gene tree)
Gene ID: -
Gene Symbol: tnrc6a
Alias: wu:fc10d10
Full Name: trinucleotide repeat containing 6a
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 37797 bases
Position: chr3:35495570-35533366
Accession: ZDB-GENE-030131-2519
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000135865	Ago_hook	PF10427.9	5.5e-11	1	1
ENSDARP00000143545	Ago_hook	PF10427.9	5.5e-11	1	1
ENSDARP00000100679	Ago_hook	PF10427.9	5.5e-11	1	1
ENSDARP00000148693	Ago_hook	PF10427.9	5.5e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000113219	-	10015	-	ENSDARP00000100679	1707 (aa)	-	E7FGM4
ENSDART00000164744	-	785	-	-	- (aa)	-	-
ENSDART00000182383	-	9423	-	ENSDARP00000148693	1707 (aa)	-	E7FGM4
ENSDART00000164420	-	314	-	-	- (aa)	-	-
ENSDART00000162757	-	9582	-	ENSDARP00000135865	1760 (aa)	-	A0A0R4IJ26
ENSDART00000178963	-	5651	-	ENSDARP00000143545	1760 (aa)	-	A0A0R4IJ26

Gene Model

Click here to download ENSDARG00000079688's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000079688's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000079688	tnrc6a	70	40.373	ENSDARG00000076847	tnrc6c1	80	40.950
ENSDARG00000079688	tnrc6a	72	36.636	ENSDARG00000103851	tnrc6c2	81	37.706

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000079688	tnrc6a	99	57.015	ENSG00000090905	TNRC6A	100	79.375	Homo_sapiens
ENSDARG00000079688	tnrc6a	99	56.692	ENSAMEG00000009333	TNRC6A	93	56.552	Ailuropoda_melanoleuca
ENSDARG00000079688	tnrc6a	99	59.302	ENSAPLG00000009978	TNRC6A	94	59.304	Anas_platyrhynchos
ENSDARG00000079688	tnrc6a	96	46.738	ENSACAG00000011857	TNRC6A	90	46.843	Anolis_carolinensis
ENSDARG00000079688	tnrc6a	99	56.558	ENSANAG00000025252	TNRC6A	92	56.141	Aotus_nancymaae
ENSDARG00000079688	tnrc6a	100	80.300	ENSAMXG00000019919	tnrc6a	100	80.774	Astyanax_mexicanus
ENSDARG00000079688	tnrc6a	99	57.353	ENSBTAG00000017999	TNRC6A	93	56.966	Bos_taurus
ENSDARG00000079688	tnrc6a	99	56.558	ENSCJAG00000020677	TNRC6A	90	56.141	Callithrix_jacchus
ENSDARG00000079688	tnrc6a	99	57.103	ENSCAFG00000017531	TNRC6A	92	57.071	Canis_familiaris
ENSDARG00000079688	tnrc6a	99	56.067	ENSCAFG00020021160	TNRC6A	93	56.016	Canis_lupus_dingo
ENSDARG00000079688	tnrc6a	99	56.973	ENSCHIG00000019448	TNRC6A	96	56.997	Capra_hircus
ENSDARG00000079688	tnrc6a	99	56.790	ENSTSYG00000012711	TNRC6A	92	56.311	Carlito_syrichta
ENSDARG00000079688	tnrc6a	99	56.902	ENSCPOG00000036684	TNRC6A	91	56.927	Cavia_porcellus
ENSDARG00000079688	tnrc6a	99	56.614	ENSCCAG00000033664	TNRC6A	92	56.196	Cebus_capucinus
ENSDARG00000079688	tnrc6a	99	57.071	ENSCATG00000019284	TNRC6A	91	57.039	Cercocebus_atys
ENSDARG00000079688	tnrc6a	99	55.780	ENSCLAG00000010217	TNRC6A	90	55.805	Chinchilla_lanigera
ENSDARG00000079688	tnrc6a	99	56.451	ENSCSAG00000006561	TNRC6A	91	56.420	Chlorocebus_sabaeus
ENSDARG00000079688	tnrc6a	91	78.917	ENSCHOG00000009374	TNRC6A	83	78.917	Choloepus_hoffmanni
ENSDARG00000079688	tnrc6a	100	59.989	ENSCPBG00000001881	TNRC6A	100	59.854	Chrysemys_picta_bellii
ENSDARG00000079688	tnrc6a	99	57.071	ENSCANG00000041549	TNRC6A	91	56.474	Colobus_angolensis_palliatus
ENSDARG00000079688	tnrc6a	99	57.143	ENSCGRG00001015021	Tnrc6a	93	56.515	Cricetulus_griseus_chok1gshd
ENSDARG00000079688	tnrc6a	99	56.895	ENSCGRG00000013351	Tnrc6a	91	56.831	Cricetulus_griseus_crigri
ENSDARG00000079688	tnrc6a	99	55.701	ENSDNOG00000013989	TNRC6A	92	55.780	Dasypus_novemcinctus
ENSDARG00000079688	tnrc6a	99	50.873	ENSETEG00000014658	TNRC6A	92	50.736	Echinops_telfairi
ENSDARG00000079688	tnrc6a	99	56.846	ENSEASG00005017693	TNRC6A	97	56.424	Equus_asinus_asinus
ENSDARG00000079688	tnrc6a	99	56.846	ENSECAG00000025056	TNRC6A	97	56.424	Equus_caballus
ENSDARG00000079688	tnrc6a	99	52.531	ENSEEUG00000004530	TNRC6A	92	52.339	Erinaceus_europaeus
ENSDARG00000079688	tnrc6a	99	57.047	ENSFCAG00000025236	TNRC6A	92	56.342	Felis_catus
ENSDARG00000079688	tnrc6a	100	59.640	ENSFALG00000003757	TNRC6A	91	59.401	Ficedula_albicollis
ENSDARG00000079688	tnrc6a	100	59.651	ENSGALG00000006068	TNRC6A	100	60.101	Gallus_gallus
ENSDARG00000079688	tnrc6a	100	59.496	ENSGAGG00000023209	TNRC6A	100	59.910	Gopherus_agassizii
ENSDARG00000079688	tnrc6a	99	56.958	ENSGGOG00000005137	TNRC6A	92	56.366	Gorilla_gorilla
ENSDARG00000079688	tnrc6a	99	46.006	ENSHGLG00000007368	-	89	45.547	Heterocephalus_glaber_female
ENSDARG00000079688	tnrc6a	99	56.292	ENSHGLG00000012474	-	91	56.261	Heterocephalus_glaber_female
ENSDARG00000079688	tnrc6a	99	56.363	ENSHGLG00100012496	-	92	56.331	Heterocephalus_glaber_male
ENSDARG00000079688	tnrc6a	99	56.814	ENSSTOG00000023394	TNRC6A	89	56.377	Ictidomys_tridecemlineatus
ENSDARG00000079688	tnrc6a	99	60.414	ENSLACG00000006277	TNRC6A	94	60.251	Latimeria_chalumnae
ENSDARG00000079688	tnrc6a	100	85.366	ENSLOCG00000005517	tnrc6a	85	85.366	Lepisosteus_oculatus
ENSDARG00000079688	tnrc6a	99	57.039	ENSLAFG00000004209	TNRC6A	93	56.726	Loxodonta_africana
ENSDARG00000079688	tnrc6a	99	55.911	ENSMFAG00000003824	TNRC6A	92	55.881	Macaca_fascicularis
ENSDARG00000079688	tnrc6a	99	57.071	ENSMMUG00000020428	TNRC6A	91	56.474	Macaca_mulatta
ENSDARG00000079688	tnrc6a	99	57.295	ENSMNEG00000034854	TNRC6A	92	55.881	Macaca_nemestrina
ENSDARG00000079688	tnrc6a	99	55.965	ENSMLEG00000042737	TNRC6A	90	55.935	Mandrillus_leucophaeus
ENSDARG00000079688	tnrc6a	99	58.728	ENSMGAG00000006455	TNRC6A	90	58.763	Meleagris_gallopavo
ENSDARG00000079688	tnrc6a	99	57.087	ENSMAUG00000012750	Tnrc6a	91	56.943	Mesocricetus_auratus
ENSDARG00000079688	tnrc6a	99	57.127	ENSMICG00000030685	TNRC6A	91	56.638	Microcebus_murinus
ENSDARG00000079688	tnrc6a	99	57.447	ENSMOCG00000000152	Tnrc6a	91	57.247	Microtus_ochrogaster
ENSDARG00000079688	tnrc6a	100	58.490	ENSMODG00000016348	TNRC6A	90	58.526	Monodelphis_domestica
ENSDARG00000079688	tnrc6a	99	57.175	MGP_CAROLIEiJ_G0030425	Tnrc6a	99	57.498	Mus_caroli
ENSDARG00000079688	tnrc6a	99	57.487	ENSMUSG00000052707	Tnrc6a	99	57.676	Mus_musculus
ENSDARG00000079688	tnrc6a	99	57.319	MGP_PahariEiJ_G0013635	Tnrc6a	99	57.439	Mus_pahari
ENSDARG00000079688	tnrc6a	99	56.498	MGP_SPRETEiJ_G0031539	Tnrc6a	99	57.153	Mus_spretus
ENSDARG00000079688	tnrc6a	99	53.236	ENSMPUG00000012324	TNRC6A	95	53.130	Mustela_putorius_furo
ENSDARG00000079688	tnrc6a	97	56.257	ENSMLUG00000002701	TNRC6A	94	55.229	Myotis_lucifugus
ENSDARG00000079688	tnrc6a	99	56.814	ENSNGAG00000020702	Tnrc6a	91	56.614	Nannospalax_galili
ENSDARG00000079688	tnrc6a	99	56.054	ENSNLEG00000011851	TNRC6A	92	56.022	Nomascus_leucogenys
ENSDARG00000079688	tnrc6a	74	65.022	ENSMEUG00000015959	-	68	64.803	Notamacropus_eugenii
ENSDARG00000079688	tnrc6a	95	75.000	ENSOPRG00000005819	TNRC6A	86	75.000	Ochotona_princeps
ENSDARG00000079688	tnrc6a	99	55.780	ENSODEG00000012802	TNRC6A	91	55.350	Octodon_degus
ENSDARG00000079688	tnrc6a	96	59.469	ENSOANG00000007672	TNRC6A	99	58.931	Ornithorhynchus_anatinus
ENSDARG00000079688	tnrc6a	99	55.519	ENSOCUG00000004325	TNRC6A	94	55.653	Oryctolagus_cuniculus
ENSDARG00000079688	tnrc6a	99	56.389	ENSOGAG00000006666	TNRC6A	92	56.576	Otolemur_garnettii
ENSDARG00000079688	tnrc6a	99	57.143	ENSOARG00000017950	TNRC6A	98	57.167	Ovis_aries
ENSDARG00000079688	tnrc6a	99	57.071	ENSPPAG00000028379	TNRC6A	92	56.474	Pan_paniscus
ENSDARG00000079688	tnrc6a	99	57.047	ENSPPRG00000005861	TNRC6A	91	56.342	Panthera_pardus
ENSDARG00000079688	tnrc6a	99	57.047	ENSPTIG00000006346	TNRC6A	90	56.902	Panthera_tigris_altaica
ENSDARG00000079688	tnrc6a	99	56.451	ENSPTRG00000007898	TNRC6A	92	56.420	Pan_troglodytes
ENSDARG00000079688	tnrc6a	99	54.602	ENSPANG00000018523	TNRC6A	92	53.713	Papio_anubis
ENSDARG00000079688	tnrc6a	97	74.654	ENSPKIG00000012859	tnrc6a	99	80.328	Paramormyrops_kingsleyae
ENSDARG00000079688	tnrc6a	85	55.840	ENSPSIG00000003965	TNRC6A	100	55.577	Pelodiscus_sinensis
ENSDARG00000079688	tnrc6a	99	57.375	ENSPEMG00000016318	Tnrc6a	91	57.071	Peromyscus_maniculatus_bairdii
ENSDARG00000079688	tnrc6a	100	60.392	ENSPCIG00000012106	TNRC6A	94	60.168	Phascolarctos_cinereus
ENSDARG00000079688	tnrc6a	99	56.318	ENSPPYG00000007202	TNRC6A	90	56.155	Pongo_abelii
ENSDARG00000079688	tnrc6a	91	81.818	ENSPCAG00000008260	TNRC6A	82	81.818	Procavia_capensis
ENSDARG00000079688	tnrc6a	99	55.194	ENSPCOG00000010134	TNRC6A	90	55.275	Propithecus_coquereli
ENSDARG00000079688	tnrc6a	87	47.382	ENSPVAG00000012066	TNRC6A	89	47.158	Pteropus_vampyrus
ENSDARG00000079688	tnrc6a	99	57.367	ENSRNOG00000024737	Tnrc6a	90	56.999	Rattus_norvegicus
ENSDARG00000079688	tnrc6a	99	56.902	ENSRBIG00000014222	TNRC6A	92	56.870	Rhinopithecus_bieti
ENSDARG00000079688	tnrc6a	99	56.396	ENSRROG00000032360	TNRC6A	91	56.366	Rhinopithecus_roxellana
ENSDARG00000079688	tnrc6a	99	56.009	ENSSBOG00000036197	TNRC6A	100	57.086	Saimiri_boliviensis_boliviensis
ENSDARG00000079688	tnrc6a	100	58.935	ENSSHAG00000008811	TNRC6A	100	59.091	Sarcophilus_harrisii
ENSDARG00000079688	tnrc6a	99	84.668	ENSSFOG00015008920	tnrc6a	99	68.971	Scleropages_formosus
ENSDARG00000079688	tnrc6a	69	51.075	ENSSARG00000002479	TNRC6A	79	51.254	Sorex_araneus
ENSDARG00000079688	tnrc6a	99	58.357	ENSSPUG00000010525	TNRC6A	100	57.862	Sphenodon_punctatus
ENSDARG00000079688	tnrc6a	99	57.684	ENSSSCG00000038870	TNRC6A	100	58.008	Sus_scrofa
ENSDARG00000079688	tnrc6a	99	58.830	ENSTGUG00000006142	TNRC6A	92	58.923	Taeniopygia_guttata
ENSDARG00000079688	tnrc6a	99	54.600	ENSTBEG00000014965	TNRC6A	93	54.788	Tupaia_belangeri
ENSDARG00000079688	tnrc6a	91	63.953	ENSTTRG00000002008	TNRC6A	83	64.271	Tursiops_truncatus
ENSDARG00000079688	tnrc6a	80	52.098	ENSUAMG00000006656	-	85	52.131	Ursus_americanus
ENSDARG00000079688	tnrc6a	99	56.832	ENSUMAG00000008274	TNRC6A	100	58.172	Ursus_maritimus
ENSDARG00000079688	tnrc6a	95	75.956	ENSVVUG00000005380	TNRC6A	96	56.291	Vulpes_vulpes
ENSDARG00000079688	tnrc6a	99	54.575	ENSXETG00000030437	TNRC6A	96	54.041	Xenopus_tropicalis