EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000079760 (Gene tree)
Gene ID: 541430
Gene Symbol: zgc:112998
Alias: -
Full Name: zgc:112998
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 5637 bases
Position: chr15:44093286-44098922
Accession: ZDB-GENE-050320-134
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000101921	zf-C2H2	PF00096.26	6.9e-47	1	8
ENSDARP00000101921	zf-C2H2	PF00096.26	6.9e-47	2	8
ENSDARP00000101921	zf-C2H2	PF00096.26	6.9e-47	3	8
ENSDARP00000101921	zf-C2H2	PF00096.26	6.9e-47	4	8
ENSDARP00000101921	zf-C2H2	PF00096.26	6.9e-47	5	8
ENSDARP00000101921	zf-C2H2	PF00096.26	6.9e-47	6	8
ENSDARP00000101921	zf-C2H2	PF00096.26	6.9e-47	7	8
ENSDARP00000101921	zf-C2H2	PF00096.26	6.9e-47	8	8
ENSDARP00000101921	zf-met	PF12874.7	0.00021	1	2
ENSDARP00000101921	zf-met	PF12874.7	0.00021	2	2
ENSDARP00000101921	zf-C2H2_jaz	PF12171.8	1.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000114352	-	1407	-	ENSDARP00000101921	392 (aa)	-	Q5BJ00

Gene Model

Click here to download ENSDARG00000079760's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000079760's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000079760	zgc:112998	93	49.682	ENSDARG00000105056	znf45l	99	49.682
ENSDARG00000079760	zgc:112998	98	47.150	ENSDARG00000074298	znf1015	90	42.231
ENSDARG00000079760	zgc:112998	85	48.193	ENSDARG00000102401	znf1001	98	48.193
ENSDARG00000079760	zgc:112998	96	45.000	ENSDARG00000088507	znf982	100	52.432
ENSDARG00000079760	zgc:112998	95	48.899	ENSDARG00000104798	BX510922.2	97	48.899
ENSDARG00000079760	zgc:112998	97	41.304	ENSDARG00000058562	znf991	99	42.353
ENSDARG00000079760	zgc:112998	85	47.896	ENSDARG00000101093	zgc:162971	99	47.896
ENSDARG00000079760	zgc:112998	85	45.580	ENSDARG00000097521	si:dkey-111k8.5	98	47.904
ENSDARG00000079760	zgc:112998	85	48.432	ENSDARG00000103777	znf1001	98	48.432
ENSDARG00000079760	zgc:112998	95	98.113	ENSDARG00000102282	CABZ01063298.1	98	98.113
ENSDARG00000079760	zgc:112998	88	43.902	ENSDARG00000071589	si:dkey-253d23.2	98	44.578
ENSDARG00000079760	zgc:112998	99	42.231	ENSDARG00000090942	CABZ01054394.1	98	43.452
ENSDARG00000079760	zgc:112998	98	46.823	ENSDARG00000100587	zgc:113886	98	46.667
ENSDARG00000079760	zgc:112998	96	49.130	ENSDARG00000103954	znf1152	98	49.130
ENSDARG00000079760	zgc:112998	84	49.153	ENSDARG00000115737	AL954741.2	100	49.153
ENSDARG00000079760	zgc:112998	85	49.508	ENSDARG00000105074	BX000701.2	91	49.508
ENSDARG00000079760	zgc:112998	96	45.238	ENSDARG00000094736	znf1157	97	46.296
ENSDARG00000079760	zgc:112998	89	45.833	ENSDARG00000105295	LO017784.1	64	45.685
ENSDARG00000079760	zgc:112998	95	46.646	ENSDARG00000102959	zgc:171220	98	46.646
ENSDARG00000079760	zgc:112998	96	46.951	ENSDARG00000100803	zgc:173517	100	46.951
ENSDARG00000079760	zgc:112998	97	47.619	ENSDARG00000078159	zgc:175284	100	56.410
ENSDARG00000079760	zgc:112998	90	47.368	ENSDARG00000098898	si:ch211-255f4.2	99	47.368
ENSDARG00000079760	zgc:112998	93	46.448	ENSDARG00000099917	znf1005	100	47.714
ENSDARG00000079760	zgc:112998	97	48.466	ENSDARG00000098021	si:dkey-111k8.2	99	45.946
ENSDARG00000079760	zgc:112998	99	48.197	ENSDARG00000087839	si:dkey-33c14.6	99	48.197
ENSDARG00000079760	zgc:112998	99	38.366	ENSDARG00000101134	CABZ01064859.2	97	38.462
ENSDARG00000079760	zgc:112998	97	50.000	ENSDARG00000102678	znf1181	90	50.000
ENSDARG00000079760	zgc:112998	97	44.651	ENSDARG00000071790	znf1153	90	43.814
ENSDARG00000079760	zgc:112998	95	44.068	ENSDARG00000099172	BX000701.1	95	44.068
ENSDARG00000079760	zgc:112998	85	49.679	ENSDARG00000110710	CU210890.1	95	49.679
ENSDARG00000079760	zgc:112998	85	45.210	ENSDARG00000087290	si:ch211-202h22.10	94	45.210
ENSDARG00000079760	zgc:112998	93	47.843	ENSDARG00000091679	FO704858.1	99	47.843
ENSDARG00000079760	zgc:112998	86	56.855	ENSDARG00000101562	znf1014	99	56.855
ENSDARG00000079760	zgc:112998	97	50.617	ENSDARG00000101694	znf1184	96	50.617
ENSDARG00000079760	zgc:112998	85	48.503	ENSDARG00000099731	CABZ01066719.1	97	48.503
ENSDARG00000079760	zgc:112998	96	47.324	ENSDARG00000113011	zgc:113102	95	47.324
ENSDARG00000079760	zgc:112998	85	45.536	ENSDARG00000098248	CABZ01081730.1	98	46.933
ENSDARG00000079760	zgc:112998	85	46.352	ENSDARG00000102411	CR847850.1	96	46.352
ENSDARG00000079760	zgc:112998	96	46.825	ENSDARG00000099890	CU207221.2	99	46.825
ENSDARG00000079760	zgc:112998	99	44.888	ENSDARG00000097928	si:ch73-40a17.4	98	44.888
ENSDARG00000079760	zgc:112998	99	52.740	ENSDARG00000111465	znf1104	96	45.860
ENSDARG00000079760	zgc:112998	99	48.221	ENSDARG00000113626	znf976	99	50.599
ENSDARG00000079760	zgc:112998	96	41.799	ENSDARG00000093378	si:ch211-235i11.5	99	46.667
ENSDARG00000079760	zgc:112998	85	48.476	ENSDARG00000096851	znf1143	99	48.476
ENSDARG00000079760	zgc:112998	86	50.595	ENSDARG00000077712	zgc:113886	99	50.595
ENSDARG00000079760	zgc:112998	98	47.468	ENSDARG00000109703	FO834825.1	99	47.468
ENSDARG00000079760	zgc:112998	96	46.842	ENSDARG00000089940	znf1008	97	46.842
ENSDARG00000079760	zgc:112998	85	51.748	ENSDARG00000088051	AL935044.1	100	51.748
ENSDARG00000079760	zgc:112998	96	45.604	ENSDARG00000104065	znf1154	97	45.604
ENSDARG00000079760	zgc:112998	98	44.043	ENSDARG00000099986	si:ch211-207i20.2	73	42.051
ENSDARG00000079760	zgc:112998	85	48.193	ENSDARG00000115857	znf1001	98	48.193

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000079760	zgc:112998	93	45.973	ENSAPOG00000023008	-	59	45.973	Acanthochromis_polyacanthus
ENSDARG00000079760	zgc:112998	86	48.039	ENSAPOG00000009709	-	60	43.077	Acanthochromis_polyacanthus
ENSDARG00000079760	zgc:112998	85	56.044	ENSACIG00000022738	-	97	45.274	Amphilophus_citrinellus
ENSDARG00000079760	zgc:112998	98	43.144	ENSAOCG00000016409	-	72	42.086	Amphiprion_ocellaris
ENSDARG00000079760	zgc:112998	98	43.478	ENSAPEG00000008746	-	72	41.727	Amphiprion_percula
ENSDARG00000079760	zgc:112998	93	45.876	ENSATEG00000015238	-	65	45.570	Anabas_testudineus
ENSDARG00000079760	zgc:112998	99	40.284	ENSATEG00000014684	-	98	39.405	Anabas_testudineus
ENSDARG00000079760	zgc:112998	98	42.997	ENSATEG00000022064	-	94	49.231	Anabas_testudineus
ENSDARG00000079760	zgc:112998	89	43.636	ENSACLG00000015462	-	67	43.636	Astatotilapia_calliptera
ENSDARG00000079760	zgc:112998	85	47.368	ENSACLG00000019349	-	70	47.368	Astatotilapia_calliptera
ENSDARG00000079760	zgc:112998	85	51.389	ENSAMXG00000007973	-	91	51.389	Astyanax_mexicanus
ENSDARG00000079760	zgc:112998	89	46.309	ENSAMXG00000034934	-	93	46.309	Astyanax_mexicanus
ENSDARG00000079760	zgc:112998	85	43.333	ENSCVAG00000019097	-	61	43.333	Cyprinodon_variegatus
ENSDARG00000079760	zgc:112998	98	44.118	ENSELUG00000004677	-	66	44.118	Esox_lucius
ENSDARG00000079760	zgc:112998	89	44.272	ENSFHEG00000003460	-	64	44.272	Fundulus_heteroclitus
ENSDARG00000079760	zgc:112998	89	43.711	ENSGMOG00000009187	ZNF626	77	43.711	Gadus_morhua
ENSDARG00000079760	zgc:112998	99	43.056	ENSGAFG00000001481	-	80	50.847	Gambusia_affinis
ENSDARG00000079760	zgc:112998	84	42.857	ENSGAFG00000007532	-	74	42.857	Gambusia_affinis
ENSDARG00000079760	zgc:112998	85	45.361	ENSHBUG00000019377	-	62	45.361	Haplochromis_burtoni
ENSDARG00000079760	zgc:112998	85	44.737	ENSIPUG00000022266	ZNF135	61	44.737	Ictalurus_punctatus
ENSDARG00000079760	zgc:112998	86	45.151	ENSKMAG00000015304	-	60	45.151	Kryptolebias_marmoratus
ENSDARG00000079760	zgc:112998	96	45.276	ENSLOCG00000017422	-	98	45.276	Lepisosteus_oculatus
ENSDARG00000079760	zgc:112998	85	48.551	ENSMAMG00000010902	-	58	48.551	Mastacembelus_armatus
ENSDARG00000079760	zgc:112998	90	43.379	ENSMAMG00000002083	-	90	42.708	Mastacembelus_armatus
ENSDARG00000079760	zgc:112998	85	44.889	ENSMZEG00005012676	-	91	46.154	Maylandia_zebra
ENSDARG00000079760	zgc:112998	87	43.910	ENSMZEG00005022884	-	92	43.910	Maylandia_zebra
ENSDARG00000079760	zgc:112998	87	47.110	ENSMZEG00005020568	-	77	46.821	Maylandia_zebra
ENSDARG00000079760	zgc:112998	89	43.636	ENSMZEG00005018502	-	67	43.636	Maylandia_zebra
ENSDARG00000079760	zgc:112998	86	45.302	ENSMMOG00000009252	-	64	45.302	Mola_mola
ENSDARG00000079760	zgc:112998	86	55.556	ENSMALG00000010959	-	89	44.954	Monopterus_albus
ENSDARG00000079760	zgc:112998	85	43.636	ENSMALG00000011756	-	66	44.330	Monopterus_albus
ENSDARG00000079760	zgc:112998	89	43.667	ENSNBRG00000024179	-	67	42.202	Neolamprologus_brichardi
ENSDARG00000079760	zgc:112998	85	47.674	ENSONIG00000020667	-	99	46.512	Oreochromis_niloticus
ENSDARG00000079760	zgc:112998	85	44.583	ENSONIG00000001986	-	96	44.583	Oreochromis_niloticus
ENSDARG00000079760	zgc:112998	85	46.980	ENSOMEG00000015179	-	78	42.599	Oryzias_melastigma
ENSDARG00000079760	zgc:112998	99	46.087	ENSPKIG00000015951	-	75	46.087	Paramormyrops_kingsleyae
ENSDARG00000079760	zgc:112998	85	44.167	ENSPMGG00000008518	-	95	44.167	Periophthalmus_magnuspinnatus
ENSDARG00000079760	zgc:112998	97	42.088	ENSPFOG00000000667	-	71	40.169	Poecilia_formosa
ENSDARG00000079760	zgc:112998	97	43.223	ENSPLAG00000013745	-	97	51.389	Poecilia_latipinna
ENSDARG00000079760	zgc:112998	85	44.444	ENSPNYG00000020737	-	80	44.444	Pundamilia_nyererei
ENSDARG00000079760	zgc:112998	85	46.557	ENSPNAG00000025882	-	73	46.557	Pygocentrus_nattereri
ENSDARG00000079760	zgc:112998	91	52.500	ENSPNAG00000010850	-	81	52.500	Pygocentrus_nattereri
ENSDARG00000079760	zgc:112998	97	44.720	ENSPNAG00000011660	-	72	44.720	Pygocentrus_nattereri
ENSDARG00000079760	zgc:112998	88	45.646	ENSSFOG00015006083	-	60	45.646	Scleropages_formosus
ENSDARG00000079760	zgc:112998	85	45.652	ENSSMAG00000013828	-	61	45.652	Scophthalmus_maximus
ENSDARG00000079760	zgc:112998	98	46.330	ENSSMAG00000013663	-	91	46.500	Scophthalmus_maximus
ENSDARG00000079760	zgc:112998	85	47.101	ENSSDUG00000015013	-	60	47.101	Seriola_dumerili
ENSDARG00000079760	zgc:112998	85	47.101	ENSSLDG00000021278	-	60	47.101	Seriola_lalandi_dorsalis
ENSDARG00000079760	zgc:112998	96	50.000	ENSSPAG00000007403	-	95	50.000	Stegastes_partitus
ENSDARG00000079760	zgc:112998	85	45.876	ENSTNIG00000002344	-	100	45.876	Tetraodon_nigroviridis
ENSDARG00000079760	zgc:112998	85	47.706	ENSXCOG00000020769	-	97	47.706	Xiphophorus_couchianus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0046872	metal ion binding	-	IEA	Function