EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000079783 (Gene tree)
Gene ID: 100534720
Gene Symbol: isg20
Alias: -
Full Name: interferon stimulated exonuclease gene
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 5239 bases
Position: chr25:19095231-19100469
Accession: ZDB-GENE-100422-17
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000128266	RNase_T	PF00929.24	7.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000154066	-	1514	XM_003201436	ENSDARP00000128266	338 (aa)	XP_003201484	E7F5Q4

Gene Model

Click here to download ENSDARG00000079783's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000079783's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000079783	isg20	50	41.176	ENSDARG00000088619	rexo4	61	41.176
ENSDARG00000079783	isg20	52	50.282	ENSDARG00000102266	isg20l2	83	40.942

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000079783	isg20	91	46.372	ENSAPOG00000008681	-	69	56.667	Acanthochromis_polyacanthus
ENSDARG00000079783	isg20	87	50.336	ENSACIG00000012040	isg20	97	53.750	Amphilophus_citrinellus
ENSDARG00000079783	isg20	70	56.667	ENSAOCG00000002636	isg20	68	56.667	Amphiprion_ocellaris
ENSDARG00000079783	isg20	70	56.250	ENSAPEG00000012004	isg20	68	56.250	Amphiprion_percula
ENSDARG00000079783	isg20	90	49.051	ENSATEG00000021719	isg20	68	57.261	Anabas_testudineus
ENSDARG00000079783	isg20	59	37.981	ENSACAG00000013905	-	77	37.104	Anolis_carolinensis
ENSDARG00000079783	isg20	90	49.026	ENSACLG00000023402	isg20	67	57.265	Astatotilapia_calliptera
ENSDARG00000079783	isg20	78	59.410	ENSAMXG00000041093	isg20	71	59.410	Astyanax_mexicanus
ENSDARG00000079783	isg20	58	37.931	ENSCING00000004431	-	96	37.931	Ciona_intestinalis
ENSDARG00000079783	isg20	69	55.696	ENSCSEG00000000768	isg20	69	55.696	Cynoglossus_semilaevis
ENSDARG00000079783	isg20	68	55.794	ENSCVAG00000009300	isg20	95	53.960	Cyprinodon_variegatus
ENSDARG00000079783	isg20	51	47.953	ENSEBUG00000010461	ISG20	61	47.953	Eptatretus_burgeri
ENSDARG00000079783	isg20	79	53.008	ENSELUG00000003116	isg20	69	53.008	Esox_lucius
ENSDARG00000079783	isg20	51	47.399	ENSFHEG00000007702	isg20l2	52	47.399	Fundulus_heteroclitus
ENSDARG00000079783	isg20	71	53.909	ENSFHEG00000018658	isg20	98	47.619	Fundulus_heteroclitus
ENSDARG00000079783	isg20	64	55.093	ENSGMOG00000001258	isg20	99	55.093	Gadus_morhua
ENSDARG00000079783	isg20	64	47.511	ENSGALG00000044204	ISG20	88	47.511	Gallus_gallus
ENSDARG00000079783	isg20	72	54.400	ENSGAFG00000005685	isg20	99	50.610	Gambusia_affinis
ENSDARG00000079783	isg20	70	56.198	ENSGACG00000007047	isg20	75	56.198	Gasterosteus_aculeatus
ENSDARG00000079783	isg20	51	46.243	ENSGAGG00000013542	ISG20	99	46.243	Gopherus_agassizii
ENSDARG00000079783	isg20	90	48.701	ENSHBUG00000008380	isg20	67	56.838	Haplochromis_burtoni
ENSDARG00000079783	isg20	50	51.479	ENSHCOG00000013913	isg20l2	87	46.497	Hippocampus_comes
ENSDARG00000079783	isg20	92	49.530	ENSIPUG00000003320	isg20	66	59.402	Ictalurus_punctatus
ENSDARG00000079783	isg20	75	52.091	ENSKMAG00000006695	isg20	70	54.065	Kryptolebias_marmoratus
ENSDARG00000079783	isg20	68	58.515	ENSLBEG00000004494	isg20	66	58.009	Labrus_bergylta
ENSDARG00000079783	isg20	65	49.327	ENSLACG00000018339	-	79	49.327	Latimeria_chalumnae
ENSDARG00000079783	isg20	67	56.277	ENSLOCG00000014240	isg20	99	56.277	Lepisosteus_oculatus
ENSDARG00000079783	isg20	88	48.208	ENSMAMG00000023057	isg20	81	50.704	Mastacembelus_armatus
ENSDARG00000079783	isg20	90	49.026	ENSMZEG00005011688	isg20	67	57.265	Maylandia_zebra
ENSDARG00000079783	isg20	65	54.464	ENSMMOG00000019013	isg20	97	64.894	Mola_mola
ENSDARG00000079783	isg20	71	57.083	ENSMALG00000016734	isg20	69	57.083	Monopterus_albus
ENSDARG00000079783	isg20	70	56.612	ENSNBRG00000016499	isg20	67	57.692	Neolamprologus_brichardi
ENSDARG00000079783	isg20	50	51.765	ENSONIG00000001534	isg20l2	91	51.479	Oreochromis_niloticus
ENSDARG00000079783	isg20	90	48.875	ENSONIG00000015622	isg20	66	57.692	Oreochromis_niloticus
ENSDARG00000079783	isg20	85	49.653	ENSORLG00020002307	isg20	68	55.983	Oryzias_latipes_hni
ENSDARG00000079783	isg20	71	55.000	ENSORLG00015016089	isg20	94	50.331	Oryzias_latipes_hsok
ENSDARG00000079783	isg20	90	47.386	ENSOMEG00000003990	isg20	93	58.896	Oryzias_melastigma
ENSDARG00000079783	isg20	50	42.197	ENSOARG00000010964	ISG20	94	42.197	Ovis_aries
ENSDARG00000079783	isg20	69	57.563	ENSPKIG00000015180	isg20	64	57.563	Paramormyrops_kingsleyae
ENSDARG00000079783	isg20	58	51.020	ENSPMGG00000021232	isg20	96	51.020	Periophthalmus_magnuspinnatus
ENSDARG00000079783	isg20	50	50.296	ENSPMAG00000001569	ISG20	92	50.296	Petromyzon_marinus
ENSDARG00000079783	isg20	50	50.888	ENSPMAG00000000577	isg20	92	50.888	Petromyzon_marinus
ENSDARG00000079783	isg20	50	45.143	ENSPCIG00000006405	ISG20	93	45.143	Phascolarctos_cinereus
ENSDARG00000079783	isg20	72	54.400	ENSPFOG00000003318	isg20	87	48.814	Poecilia_formosa
ENSDARG00000079783	isg20	70	56.118	ENSPLAG00000005932	isg20	97	53.807	Poecilia_latipinna
ENSDARG00000079783	isg20	72	54.400	ENSPMEG00000016899	isg20	88	54.950	Poecilia_mexicana
ENSDARG00000079783	isg20	90	49.026	ENSPNYG00000010204	isg20	67	57.265	Pundamilia_nyererei
ENSDARG00000079783	isg20	90	55.449	ENSPNAG00000022301	isg20	74	59.851	Pygocentrus_nattereri
ENSDARG00000079783	isg20	69	55.983	ENSSFOG00015018481	isg20	59	55.983	Scleropages_formosus
ENSDARG00000079783	isg20	89	49.515	ENSSMAG00000004520	isg20	83	50.338	Scophthalmus_maximus
ENSDARG00000079783	isg20	89	50.482	ENSSDUG00000000366	isg20	68	58.921	Seriola_dumerili
ENSDARG00000079783	isg20	90	49.359	ENSSLDG00000002860	isg20	68	58.159	Seriola_lalandi_dorsalis
ENSDARG00000079783	isg20	90	49.359	ENSSLDG00000003333	-	68	58.159	Seriola_lalandi_dorsalis
ENSDARG00000079783	isg20	64	50.226	ENSSPUG00000012053	-	60	50.679	Sphenodon_punctatus
ENSDARG00000079783	isg20	70	54.812	ENSSPAG00000020558	isg20	69	54.812	Stegastes_partitus
ENSDARG00000079783	isg20	69	58.798	ENSTRUG00000015658	isg20	64	58.798	Takifugu_rubripes
ENSDARG00000079783	isg20	50	48.824	ENSTRUG00000021768	isg20l2	52	48.824	Takifugu_rubripes
ENSDARG00000079783	isg20	57	52.332	ENSTNIG00000010389	isg20	95	52.332	Tetraodon_nigroviridis
ENSDARG00000079783	isg20	53	56.906	ENSXETG00000007588	aen	80	54.634	Xenopus_tropicalis
ENSDARG00000079783	isg20	68	56.223	ENSXMAG00000013066	isg20	68	58.140	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000175	3'-5'-exoribonuclease activity	-	IEA	Function
GO:0003676	nucleic acid binding	-	IEA	Function