EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDARG00000079827 (Gene tree)
Gene ID: -
Gene Symbol: srbd1
Alias: si:ch211-219o4.1
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 6248 bases
Position: chr13:10023256-10029503
Accession: ZDB-GENE-081107-19
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000117234	S1	PF00575.23	3.4e-11	1	1
ENSDARP00000098290	S1	PF00575.23	4.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000110035	-	552	-	ENSDARP00000098290	183 (aa)	-	F1QIX0
ENSDART00000138228	-	774	-	ENSDARP00000117234	159 (aa)	-	F1QPK4

Gene Model

Click here to download ENSDARG00000079827's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000079827's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000079827	srbd1	99	55.414	ENSACAG00000003811	-	50	55.414	Anolis_carolinensis
ENSDARG00000079827	srbd1	99	56.688	ENSCAFG00020026284	SRBD1	91	56.688	Canis_lupus_dingo
ENSDARG00000079827	srbd1	99	55.414	ENSCAPG00000014166	-	98	55.414	Cavia_aperea
ENSDARG00000079827	srbd1	99	56.051	ENSEASG00005003132	SRBD1	97	56.051	Equus_asinus_asinus
ENSDARG00000079827	srbd1	99	68.987	ENSHCOG00000020901	-	100	69.182	Hippocampus_comes
ENSDARG00000079827	srbd1	99	55.414	ENSLAFG00000004190	-	57	55.000	Loxodonta_africana
ENSDARG00000079827	srbd1	99	56.051	MGP_CAROLIEiJ_G0021934	Srbd1	52	55.625	Mus_caroli
ENSDARG00000079827	srbd1	99	56.051	ENSMUSG00000024135	Srbd1	98	55.621	Mus_musculus
ENSDARG00000079827	srbd1	99	72.152	ENSSPAG00000014206	-	78	72.327	Stegastes_partitus
ENSDARG00000079827	srbd1	99	57.325	ENSUAMG00000008126	SRBD1	56	56.875	Ursus_americanus