EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000080021 (Gene tree)
Gene ID: 561535
Gene Symbol: zmat3
Alias: zmp:0000000878
Full Name: zinc finger%2C matrin-type 3
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 14751 bases
Position: chr11:34522554-34537304
Accession: ZDB-GENE-130530-881
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000147361	zf-met	PF12874.7	2e-22	1	3
ENSDARP00000147361	zf-met	PF12874.7	2e-22	2	3
ENSDARP00000147361	zf-met	PF12874.7	2e-22	3	3
ENSDARP00000098269	zf-met	PF12874.7	3.2e-22	1	3
ENSDARP00000098269	zf-met	PF12874.7	3.2e-22	2	3
ENSDARP00000098269	zf-met	PF12874.7	3.2e-22	3	3
ENSDARP00000147361	zf-C2H2_jaz	PF12171.8	4.5e-21	1	3
ENSDARP00000147361	zf-C2H2_jaz	PF12171.8	4.5e-21	2	3
ENSDARP00000147361	zf-C2H2_jaz	PF12171.8	4.5e-21	3	3
ENSDARP00000098269	zf-C2H2_jaz	PF12171.8	7.1e-21	1	3
ENSDARP00000098269	zf-C2H2_jaz	PF12171.8	7.1e-21	2	3
ENSDARP00000098269	zf-C2H2_jaz	PF12171.8	7.1e-21	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000109833	-	1270	XM_005155855	ENSDARP00000098269	361 (aa)	XP_005155912	E7EZ09
ENSDART00000192257	-	1017	-	ENSDARP00000147361	310 (aa)	-	A0A2R8Q3R4

Gene Model

Click here to download ENSDARG00000080021's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre04115	p53 signaling pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000080021's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000080021	zmat3	67	37.795	ENSDARG00000092987	zmat4a	78	37.795

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000080021	zmat3	86	66.052	ENSG00000172667	ZMAT3	83	68.400	Homo_sapiens
ENSDARG00000080021	zmat3	100	67.361	ENSAPOG00000015037	zmat3	99	75.847	Acanthochromis_polyacanthus
ENSDARG00000080021	zmat3	91	63.014	ENSAMEG00000010742	ZMAT3	81	69.262	Ailuropoda_melanoleuca
ENSDARG00000080021	zmat3	96	66.019	ENSACIG00000023037	zmat3	100	64.379	Amphilophus_citrinellus
ENSDARG00000080021	zmat3	100	67.361	ENSAOCG00000017955	zmat3	99	75.847	Amphiprion_ocellaris
ENSDARG00000080021	zmat3	85	65.845	ENSAPEG00000014553	zmat3	79	73.729	Amphiprion_percula
ENSDARG00000080021	zmat3	75	73.077	ENSATEG00000022244	zmat3	82	73.077	Anabas_testudineus
ENSDARG00000080021	zmat3	90	63.929	ENSAPLG00000013292	ZMAT3	82	69.323	Anas_platyrhynchos
ENSDARG00000080021	zmat3	87	64.621	ENSACAG00000005005	ZMAT3	82	67.460	Anolis_carolinensis
ENSDARG00000080021	zmat3	88	60.072	ENSANAG00000035673	ZMAT3	79	66.667	Aotus_nancymaae
ENSDARG00000080021	zmat3	100	72.374	ENSACLG00000026272	zmat3	100	61.994	Astatotilapia_calliptera
ENSDARG00000080021	zmat3	100	78.594	ENSAMXG00000009798	zmat3	100	75.000	Astyanax_mexicanus
ENSDARG00000080021	zmat3	86	65.314	ENSBTAG00000012463	ZMAT3	81	69.672	Bos_taurus
ENSDARG00000080021	zmat3	90	63.066	ENSCJAG00000013399	ZMAT3	83	68.400	Callithrix_jacchus
ENSDARG00000080021	zmat3	91	63.448	ENSCAFG00000011081	ZMAT3	81	69.835	Canis_familiaris
ENSDARG00000080021	zmat3	91	63.448	ENSCAFG00020023107	ZMAT3	81	69.835	Canis_lupus_dingo
ENSDARG00000080021	zmat3	86	65.299	ENSCHIG00000025074	ZMAT3	81	69.295	Capra_hircus
ENSDARG00000080021	zmat3	86	65.299	ENSTSYG00000026546	ZMAT3	81	69.295	Carlito_syrichta
ENSDARG00000080021	zmat3	86	66.045	ENSCAPG00000014645	ZMAT3	81	69.295	Cavia_aperea
ENSDARG00000080021	zmat3	86	66.045	ENSCPOG00000003865	ZMAT3	81	69.295	Cavia_porcellus
ENSDARG00000080021	zmat3	90	63.066	ENSCCAG00000036721	ZMAT3	83	68.000	Cebus_capucinus
ENSDARG00000080021	zmat3	90	56.794	ENSCATG00000025137	ZMAT3	80	61.200	Cercocebus_atys
ENSDARG00000080021	zmat3	86	65.299	ENSCLAG00000013464	ZMAT3	81	69.295	Chinchilla_lanigera
ENSDARG00000080021	zmat3	86	65.299	ENSCSAG00000012935	ZMAT3	83	67.611	Chlorocebus_sabaeus
ENSDARG00000080021	zmat3	86	65.314	ENSCHOG00000005591	ZMAT3	83	68.800	Choloepus_hoffmanni
ENSDARG00000080021	zmat3	91	61.972	ENSCPBG00000026917	ZMAT3	80	68.908	Chrysemys_picta_bellii
ENSDARG00000080021	zmat3	86	65.314	ENSCANG00000029476	ZMAT3	83	67.600	Colobus_angolensis_palliatus
ENSDARG00000080021	zmat3	86	63.971	ENSCGRG00001012339	Zmat3	79	68.465	Cricetulus_griseus_chok1gshd
ENSDARG00000080021	zmat3	86	63.971	ENSCGRG00000011491	Zmat3	79	68.465	Cricetulus_griseus_crigri
ENSDARG00000080021	zmat3	99	71.146	ENSCSEG00000019463	zmat3	97	64.452	Cynoglossus_semilaevis
ENSDARG00000080021	zmat3	100	68.421	ENSCVAG00000011847	zmat3	96	60.656	Cyprinodon_variegatus
ENSDARG00000080021	zmat3	86	65.568	ENSDNOG00000012284	ZMAT3	81	70.082	Dasypus_novemcinctus
ENSDARG00000080021	zmat3	86	64.179	ENSDORG00000011801	Zmat3	81	68.050	Dipodomys_ordii
ENSDARG00000080021	zmat3	68	57.477	ENSETEG00000008883	ZMAT3	76	62.032	Echinops_telfairi
ENSDARG00000080021	zmat3	89	65.185	ENSEASG00005016887	ZMAT3	81	69.136	Equus_asinus_asinus
ENSDARG00000080021	zmat3	86	65.926	ENSECAG00000012784	ZMAT3	81	69.959	Equus_caballus
ENSDARG00000080021	zmat3	88	59.058	ENSEEUG00000001126	ZMAT3	83	61.753	Erinaceus_europaeus
ENSDARG00000080021	zmat3	100	68.930	ENSELUG00000010132	zmat3	99	68.930	Esox_lucius
ENSDARG00000080021	zmat3	91	62.671	ENSFCAG00000014578	ZMAT3	81	69.262	Felis_catus
ENSDARG00000080021	zmat3	92	61.856	ENSFALG00000008403	ZMAT3	83	68.526	Ficedula_albicollis
ENSDARG00000080021	zmat3	86	65.314	ENSFDAG00000013376	ZMAT3	81	69.262	Fukomys_damarensis
ENSDARG00000080021	zmat3	96	63.816	ENSFHEG00000003221	zmat3	96	62.829	Fundulus_heteroclitus
ENSDARG00000080021	zmat3	80	71.888	ENSGMOG00000008558	zmat3	100	71.888	Gadus_morhua
ENSDARG00000080021	zmat3	92	61.856	ENSGALG00000040948	ZMAT3	93	69.355	Gallus_gallus
ENSDARG00000080021	zmat3	71	72.611	ENSGAFG00000010485	zmat3	55	70.909	Gambusia_affinis
ENSDARG00000080021	zmat3	81	69.261	ENSGACG00000006175	zmat3	89	71.784	Gasterosteus_aculeatus
ENSDARG00000080021	zmat3	91	61.972	ENSGAGG00000009275	ZMAT3	80	68.908	Gopherus_agassizii
ENSDARG00000080021	zmat3	86	65.672	ENSGGOG00000009975	ZMAT3	83	68.016	Gorilla_gorilla
ENSDARG00000080021	zmat3	100	72.374	ENSHBUG00000004401	zmat3	78	74.786	Haplochromis_burtoni
ENSDARG00000080021	zmat3	86	64.925	ENSHGLG00000011523	ZMAT3	83	68.016	Heterocephalus_glaber_female
ENSDARG00000080021	zmat3	86	64.925	ENSHGLG00100012235	ZMAT3	83	68.016	Heterocephalus_glaber_male
ENSDARG00000080021	zmat3	88	65.141	ENSHCOG00000010624	zmat3	72	69.721	Hippocampus_comes
ENSDARG00000080021	zmat3	100	74.603	ENSIPUG00000003043	zmat3	100	71.858	Ictalurus_punctatus
ENSDARG00000080021	zmat3	86	65.672	ENSSTOG00000028436	ZMAT3	81	69.710	Ictidomys_tridecemlineatus
ENSDARG00000080021	zmat3	88	63.235	ENSJJAG00000004288	Zmat3	83	66.260	Jaculus_jaculus
ENSDARG00000080021	zmat3	100	71.705	ENSKMAG00000008962	zmat3	86	74.380	Kryptolebias_marmoratus
ENSDARG00000080021	zmat3	96	63.487	ENSLBEG00000001993	zmat3	81	73.729	Labrus_bergylta
ENSDARG00000080021	zmat3	97	59.105	ENSLACG00000015780	ZMAT3	99	50.127	Latimeria_chalumnae
ENSDARG00000080021	zmat3	100	69.592	ENSLOCG00000001108	zmat3	100	66.757	Lepisosteus_oculatus
ENSDARG00000080021	zmat3	86	66.052	ENSLAFG00000000897	ZMAT3	83	68.400	Loxodonta_africana
ENSDARG00000080021	zmat3	86	65.683	ENSMFAG00000021292	ZMAT3	83	68.000	Macaca_fascicularis
ENSDARG00000080021	zmat3	86	65.683	ENSMMUG00000003216	ZMAT3	83	68.000	Macaca_mulatta
ENSDARG00000080021	zmat3	86	65.683	ENSMNEG00000036725	ZMAT3	83	68.000	Macaca_nemestrina
ENSDARG00000080021	zmat3	86	64.925	ENSMLEG00000026279	ZMAT3	83	67.611	Mandrillus_leucophaeus
ENSDARG00000080021	zmat3	96	65.862	ENSMAMG00000012349	zmat3	100	61.491	Mastacembelus_armatus
ENSDARG00000080021	zmat3	99	64.401	ENSMZEG00005015427	zmat3	100	62.305	Maylandia_zebra
ENSDARG00000080021	zmat3	90	63.214	ENSMGAG00000009873	ZMAT3	82	68.952	Meleagris_gallopavo
ENSDARG00000080021	zmat3	86	64.179	ENSMAUG00000001986	Zmat3	83	66.400	Mesocricetus_auratus
ENSDARG00000080021	zmat3	94	61.695	ENSMICG00000049501	ZMAT3	81	68.443	Microcebus_murinus
ENSDARG00000080021	zmat3	86	64.552	ENSMOCG00000018844	Zmat3	83	67.206	Microtus_ochrogaster
ENSDARG00000080021	zmat3	86	65.926	ENSMMOG00000001603	zmat3	70	72.222	Mola_mola
ENSDARG00000080021	zmat3	82	62.016	ENSMODG00000021308	ZMAT3	77	66.250	Monodelphis_domestica
ENSDARG00000080021	zmat3	100	70.930	ENSMALG00000019683	zmat3	78	73.077	Monopterus_albus
ENSDARG00000080021	zmat3	94	64.312	MGP_CAROLIEiJ_G0024914	Zmat3	83	67.068	Mus_caroli
ENSDARG00000080021	zmat3	94	64.312	ENSMUSG00000027663	Zmat3	83	67.068	Mus_musculus
ENSDARG00000080021	zmat3	94	64.312	MGP_PahariEiJ_G0026359	Zmat3	83	66.667	Mus_pahari
ENSDARG00000080021	zmat3	94	63.941	MGP_SPRETEiJ_G0025848	Zmat3	83	66.667	Mus_spretus
ENSDARG00000080021	zmat3	91	63.322	ENSMPUG00000017206	ZMAT3	81	70.124	Mustela_putorius_furo
ENSDARG00000080021	zmat3	77	70.902	ENSMLUG00000013074	ZMAT3	81	70.902	Myotis_lucifugus
ENSDARG00000080021	zmat3	86	65.299	ENSNGAG00000023602	Zmat3	83	68.016	Nannospalax_galili
ENSDARG00000080021	zmat3	88	64.948	ENSNBRG00000020886	zmat3	78	74.786	Neolamprologus_brichardi
ENSDARG00000080021	zmat3	86	66.421	ENSNLEG00000005658	ZMAT3	83	68.800	Nomascus_leucogenys
ENSDARG00000080021	zmat3	94	60.204	ENSMEUG00000015724	ZMAT3	82	67.200	Notamacropus_eugenii
ENSDARG00000080021	zmat3	77	68.050	ENSODEG00000003313	ZMAT3	81	68.880	Octodon_degus
ENSDARG00000080021	zmat3	96	66.007	ENSONIG00000008388	zmat3	96	65.017	Oreochromis_niloticus
ENSDARG00000080021	zmat3	68	52.273	ENSOANG00000009901	ZMAT3	63	59.884	Ornithorhynchus_anatinus
ENSDARG00000080021	zmat3	86	64.179	ENSOCUG00000004658	ZMAT3	81	68.050	Oryctolagus_cuniculus
ENSDARG00000080021	zmat3	94	71.429	ENSORLG00000011575	zmat3	75	64.094	Oryzias_latipes
ENSDARG00000080021	zmat3	99	66.078	ENSORLG00020005858	zmat3	75	63.758	Oryzias_latipes_hni
ENSDARG00000080021	zmat3	94	71.429	ENSORLG00015003707	zmat3	75	64.094	Oryzias_latipes_hsok
ENSDARG00000080021	zmat3	100	60.231	ENSOMEG00000011303	zmat3	99	63.758	Oryzias_melastigma
ENSDARG00000080021	zmat3	86	64.945	ENSOGAG00000003252	ZMAT3	81	68.443	Otolemur_garnettii
ENSDARG00000080021	zmat3	86	65.683	ENSOARG00000020713	ZMAT3	81	69.672	Ovis_aries
ENSDARG00000080021	zmat3	86	66.052	ENSPPAG00000035483	ZMAT3	83	68.400	Pan_paniscus
ENSDARG00000080021	zmat3	91	63.356	ENSPPRG00000004407	ZMAT3	81	69.672	Panthera_pardus
ENSDARG00000080021	zmat3	91	63.356	ENSPTIG00000009929	ZMAT3	81	69.672	Panthera_tigris_altaica
ENSDARG00000080021	zmat3	86	66.052	ENSPTRG00000015641	ZMAT3	83	68.400	Pan_troglodytes
ENSDARG00000080021	zmat3	86	64.925	ENSPANG00000023167	ZMAT3	83	67.742	Papio_anubis
ENSDARG00000080021	zmat3	100	71.795	ENSPKIG00000023370	zmat3	100	69.972	Paramormyrops_kingsleyae
ENSDARG00000080021	zmat3	91	60.764	ENSPSIG00000014839	ZMAT3	82	65.323	Pelodiscus_sinensis
ENSDARG00000080021	zmat3	85	63.838	ENSPMGG00000023924	zmat3	83	69.915	Periophthalmus_magnuspinnatus
ENSDARG00000080021	zmat3	86	63.433	ENSPEMG00000019154	Zmat3	83	65.587	Peromyscus_maniculatus_bairdii
ENSDARG00000080021	zmat3	100	58.031	ENSPFOG00000019206	zmat3	100	58.808	Poecilia_formosa
ENSDARG00000080021	zmat3	96	65.667	ENSPLAG00000022572	zmat3	96	64.000	Poecilia_latipinna
ENSDARG00000080021	zmat3	88	58.562	ENSPMEG00000004131	-	96	58.528	Poecilia_mexicana
ENSDARG00000080021	zmat3	100	68.421	ENSPREG00000022632	zmat3	83	74.477	Poecilia_reticulata
ENSDARG00000080021	zmat3	86	66.052	ENSPPYG00000014315	ZMAT3	83	68.400	Pongo_abelii
ENSDARG00000080021	zmat3	86	65.926	ENSPCAG00000008585	ZMAT3	82	69.136	Procavia_capensis
ENSDARG00000080021	zmat3	94	60.959	ENSPCOG00000022835	ZMAT3	81	67.635	Propithecus_coquereli
ENSDARG00000080021	zmat3	86	65.314	ENSPVAG00000004489	ZMAT3	81	69.547	Pteropus_vampyrus
ENSDARG00000080021	zmat3	88	64.948	ENSPNYG00000014350	zmat3	78	74.786	Pundamilia_nyererei
ENSDARG00000080021	zmat3	100	80.192	ENSPNAG00000015664	zmat3	100	78.297	Pygocentrus_nattereri
ENSDARG00000080021	zmat3	91	61.592	ENSRNOG00000010119	Zmat3	83	66.935	Rattus_norvegicus
ENSDARG00000080021	zmat3	86	65.314	ENSRBIG00000029622	ZMAT3	83	67.600	Rhinopithecus_bieti
ENSDARG00000080021	zmat3	86	65.314	ENSRROG00000038345	ZMAT3	83	67.600	Rhinopithecus_roxellana
ENSDARG00000080021	zmat3	88	64.130	ENSSBOG00000033332	ZMAT3	83	68.000	Saimiri_boliviensis_boliviensis
ENSDARG00000080021	zmat3	94	61.149	ENSSHAG00000016154	ZMAT3	82	67.200	Sarcophilus_harrisii
ENSDARG00000080021	zmat3	100	72.930	ENSSFOG00015006984	zmat3	100	71.523	Scleropages_formosus
ENSDARG00000080021	zmat3	75	73.418	ENSSMAG00000019540	-	52	73.418	Scophthalmus_maximus
ENSDARG00000080021	zmat3	96	62.883	ENSSDUG00000016188	zmat3	69	74.576	Seriola_dumerili
ENSDARG00000080021	zmat3	99	63.804	ENSSLDG00000018611	zmat3	69	74.576	Seriola_lalandi_dorsalis
ENSDARG00000080021	zmat3	63	58.974	ENSSARG00000004901	ZMAT3	73	62.500	Sorex_araneus
ENSDARG00000080021	zmat3	85	64.286	ENSSPUG00000014753	ZMAT3	84	66.800	Sphenodon_punctatus
ENSDARG00000080021	zmat3	86	65.278	ENSSPAG00000011062	zmat3	69	73.729	Stegastes_partitus
ENSDARG00000080021	zmat3	86	64.925	ENSSSCG00000033860	ZMAT3	81	69.295	Sus_scrofa
ENSDARG00000080021	zmat3	92	62.585	ENSTGUG00000010765	-	83	68.924	Taeniopygia_guttata
ENSDARG00000080021	zmat3	77	72.016	ENSTRUG00000004788	zmat3	86	70.400	Takifugu_rubripes
ENSDARG00000080021	zmat3	92	63.103	ENSTNIG00000006781	zmat3	97	61.824	Tetraodon_nigroviridis
ENSDARG00000080021	zmat3	73	76.774	ENSTBEG00000012359	ZMAT3	96	76.774	Tupaia_belangeri
ENSDARG00000080021	zmat3	77	67.623	ENSTTRG00000004923	ZMAT3	81	67.623	Tursiops_truncatus
ENSDARG00000080021	zmat3	86	65.314	ENSUAMG00000007623	ZMAT3	81	68.852	Ursus_americanus
ENSDARG00000080021	zmat3	86	65.299	ENSUMAG00000007847	ZMAT3	81	68.880	Ursus_maritimus
ENSDARG00000080021	zmat3	77	70.082	ENSVPAG00000006611	ZMAT3	81	70.082	Vicugna_pacos
ENSDARG00000080021	zmat3	91	63.448	ENSVVUG00000004729	ZMAT3	81	69.835	Vulpes_vulpes
ENSDARG00000080021	zmat3	91	56.187	ENSXETG00000007251	zmat3	81	63.968	Xenopus_tropicalis
ENSDARG00000080021	zmat3	96	64.333	ENSXCOG00000008397	zmat3	84	72.840	Xiphophorus_couchianus
ENSDARG00000080021	zmat3	100	68.421	ENSXMAG00000015188	zmat3	67	74.274	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0008270	zinc ion binding	-	IEA	Function
GO:0046872	metal ion binding	-	IEA	Function