EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000086613 (Gene tree)
Gene ID: 110438134
Gene Symbol: si:dkey-266f7.10
Alias: -
Full Name: si:dkey-266f7.10
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 3192 bases
Position: chr19:7954679-7957870
Accession: ZDB-GENE-120215-242
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000125723	Exo_endo_phos	PF03372.23	3.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000150909	-	1810	XM_021468199	ENSDARP00000125723	543 (aa)	XP_021323874	E7FEG4

Gene Model

Click here to download ENSDARG00000086613's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000086613's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000086613	si:dkey-266f7.10	94	32.397	ENSDARG00000094886	si:dkey-266f7.5	54	32.397

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000086613	si:dkey-266f7.10	93	33.086	ENSAMXG00000019756	-	53	33.086	Astyanax_mexicanus
ENSDARG00000086613	si:dkey-266f7.10	90	30.648	ENSAMXG00000032864	-	86	30.452	Astyanax_mexicanus
ENSDARG00000086613	si:dkey-266f7.10	90	30.845	ENSIPUG00000019271	-	86	30.059	Ictalurus_punctatus