EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000086849 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-187k19.2
Alias: -
Full Name: si:dkey-187k19.2
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 1724 bases
Position: chr17:40109059-40110782
Accession: ZDB-GENE-131121-68
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000112390	RVT_1	PF00078.27	1.3e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000126929	-	1724	-	ENSDARP00000112390	570 (aa)	-	E7F608

Gene Model

Click here to download ENSDARG00000086849's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000086849's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000086849	si:dkey-187k19.2	68	57.949	ENSDARG00000100538	si:dkeyp-88h4.2	50	57.949
ENSDARG00000086849	si:dkey-187k19.2	100	98.772	ENSDARG00000098557	BX323564.1	59	98.772
ENSDARG00000086849	si:dkey-187k19.2	99	31.088	ENSDARG00000099418	CABZ01030017.1	53	31.088

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000086849	si:dkey-187k19.2	99	46.597	ENSACLG00000005544	-	51	46.597	Astatotilapia_calliptera
ENSDARG00000086849	si:dkey-187k19.2	99	46.714	ENSAMXG00000030338	-	50	46.714	Astyanax_mexicanus
ENSDARG00000086849	si:dkey-187k19.2	55	32.716	ENSHBUG00000020868	-	79	32.716	Haplochromis_burtoni
ENSDARG00000086849	si:dkey-187k19.2	65	49.457	ENSKMAG00000001475	-	66	49.457	Kryptolebias_marmoratus
ENSDARG00000086849	si:dkey-187k19.2	66	32.564	ENSKMAG00000007124	-	78	32.564	Kryptolebias_marmoratus
ENSDARG00000086849	si:dkey-187k19.2	99	46.809	ENSKMAG00000018235	-	60	46.809	Kryptolebias_marmoratus
ENSDARG00000086849	si:dkey-187k19.2	52	35.762	ENSLBEG00000018239	-	99	35.762	Labrus_bergylta
ENSDARG00000086849	si:dkey-187k19.2	62	33.795	ENSLOCG00000018030	-	99	33.795	Lepisosteus_oculatus
ENSDARG00000086849	si:dkey-187k19.2	56	40.373	ENSLOCG00000000531	-	51	40.373	Lepisosteus_oculatus
ENSDARG00000086849	si:dkey-187k19.2	54	34.405	ENSLOCG00000000597	-	68	34.405	Lepisosteus_oculatus
ENSDARG00000086849	si:dkey-187k19.2	57	45.988	ENSLOCG00000017441	-	95	45.988	Lepisosteus_oculatus
ENSDARG00000086849	si:dkey-187k19.2	99	45.503	ENSONIG00000020693	-	68	45.503	Oreochromis_niloticus
ENSDARG00000086849	si:dkey-187k19.2	61	51.585	ENSONIG00000020426	-	98	51.585	Oreochromis_niloticus
ENSDARG00000086849	si:dkey-187k19.2	99	45.326	ENSORLG00000028372	-	58	45.326	Oryzias_latipes
ENSDARG00000086849	si:dkey-187k19.2	69	33.668	ENSORLG00000029559	-	95	33.668	Oryzias_latipes
ENSDARG00000086849	si:dkey-187k19.2	99	47.266	ENSORLG00000027119	-	51	47.266	Oryzias_latipes
ENSDARG00000086849	si:dkey-187k19.2	60	51.020	ENSORLG00000023710	-	62	51.020	Oryzias_latipes
ENSDARG00000086849	si:dkey-187k19.2	74	45.972	ENSORLG00000026021	-	53	45.414	Oryzias_latipes
ENSDARG00000086849	si:dkey-187k19.2	99	45.855	ENSORLG00000030108	-	56	45.855	Oryzias_latipes
ENSDARG00000086849	si:dkey-187k19.2	99	43.717	ENSORLG00000024817	-	60	43.717	Oryzias_latipes
ENSDARG00000086849	si:dkey-187k19.2	99	57.951	ENSORLG00000028041	-	59	57.951	Oryzias_latipes
ENSDARG00000086849	si:dkey-187k19.2	99	45.503	ENSORLG00000022810	-	52	45.503	Oryzias_latipes
ENSDARG00000086849	si:dkey-187k19.2	99	46.479	ENSORLG00000026865	-	53	46.479	Oryzias_latipes
ENSDARG00000086849	si:dkey-187k19.2	96	57.923	ENSORLG00020007542	-	66	57.923	Oryzias_latipes_hni
ENSDARG00000086849	si:dkey-187k19.2	88	57.200	ENSORLG00020013755	-	64	57.200	Oryzias_latipes_hni
ENSDARG00000086849	si:dkey-187k19.2	88	50.398	ENSORLG00020021090	-	56	50.398	Oryzias_latipes_hni
ENSDARG00000086849	si:dkey-187k19.2	99	46.655	ENSORLG00020018783	-	58	46.655	Oryzias_latipes_hni
ENSDARG00000086849	si:dkey-187k19.2	86	45.808	ENSORLG00020008765	-	62	45.808	Oryzias_latipes_hni
ENSDARG00000086849	si:dkey-187k19.2	88	57.171	ENSORLG00020013618	-	64	57.171	Oryzias_latipes_hni
ENSDARG00000086849	si:dkey-187k19.2	99	57.774	ENSORLG00020016067	-	61	57.774	Oryzias_latipes_hni
ENSDARG00000086849	si:dkey-187k19.2	99	44.797	ENSORLG00020021337	-	56	44.797	Oryzias_latipes_hni
ENSDARG00000086849	si:dkey-187k19.2	99	46.749	ENSORLG00020008557	-	52	46.749	Oryzias_latipes_hni
ENSDARG00000086849	si:dkey-187k19.2	88	50.000	ENSORLG00020006818	-	56	50.000	Oryzias_latipes_hni
ENSDARG00000086849	si:dkey-187k19.2	82	42.735	ENSORLG00015017584	-	64	42.735	Oryzias_latipes_hsok
ENSDARG00000086849	si:dkey-187k19.2	96	46.435	ENSORLG00015021204	-	65	46.435	Oryzias_latipes_hsok
ENSDARG00000086849	si:dkey-187k19.2	69	48.082	ENSORLG00015001172	-	60	48.082	Oryzias_latipes_hsok
ENSDARG00000086849	si:dkey-187k19.2	99	44.425	ENSORLG00015019437	-	58	44.425	Oryzias_latipes_hsok
ENSDARG00000086849	si:dkey-187k19.2	99	44.405	ENSOMEG00000015408	-	52	44.405	Oryzias_melastigma
ENSDARG00000086849	si:dkey-187k19.2	99	43.915	ENSOMEG00000021029	-	53	43.915	Oryzias_melastigma
ENSDARG00000086849	si:dkey-187k19.2	99	45.760	ENSPKIG00000020531	-	54	45.760	Paramormyrops_kingsleyae
ENSDARG00000086849	si:dkey-187k19.2	99	37.434	ENSPFOG00000013154	-	68	37.434	Poecilia_formosa
ENSDARG00000086849	si:dkey-187k19.2	53	49.342	ENSPFOG00000022364	-	99	49.342	Poecilia_formosa
ENSDARG00000086849	si:dkey-187k19.2	99	42.021	ENSPFOG00000023623	-	87	42.021	Poecilia_formosa
ENSDARG00000086849	si:dkey-187k19.2	68	32.412	ENSPLAG00000021304	-	92	32.412	Poecilia_latipinna
ENSDARG00000086849	si:dkey-187k19.2	50	34.495	ENSPMEG00000005418	-	74	34.495	Poecilia_mexicana
ENSDARG00000086849	si:dkey-187k19.2	70	32.039	ENSPMEG00000021732	-	98	32.039	Poecilia_mexicana
ENSDARG00000086849	si:dkey-187k19.2	55	44.231	ENSSFOG00015015726	-	99	44.231	Scleropages_formosus
ENSDARG00000086849	si:dkey-187k19.2	53	36.482	ENSSLDG00000000237	-	96	36.808	Seriola_lalandi_dorsalis
ENSDARG00000086849	si:dkey-187k19.2	57	30.887	ENSXCOG00000012075	-	79	30.887	Xiphophorus_couchianus
ENSDARG00000086849	si:dkey-187k19.2	99	44.621	ENSXMAG00000024671	-	50	44.621	Xiphophorus_maculatus
ENSDARG00000086849	si:dkey-187k19.2	99	46.032	ENSXMAG00000022515	-	59	46.032	Xiphophorus_maculatus
ENSDARG00000086849	si:dkey-187k19.2	62	32.597	ENSXMAG00000028317	-	79	32.597	Xiphophorus_maculatus
ENSDARG00000086849	si:dkey-187k19.2	99	45.855	ENSXMAG00000026019	-	51	45.855	Xiphophorus_maculatus
ENSDARG00000086849	si:dkey-187k19.2	66	32.732	ENSXMAG00000020872	-	85	32.732	Xiphophorus_maculatus