EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000087074 (Gene tree)
Gene ID: 798589
Gene Symbol: znf574
Alias: rumba|si:ch211-87d12.1
Full Name: zinc finger protein 574
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 47025 bases
Position: chr16:11297703-11344727
Accession: ZDB-GENE-100922-259
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000108333	zf-C2H2	PF00096.26	1.4e-45	1	6
ENSDARP00000108333	zf-C2H2	PF00096.26	1.4e-45	2	6
ENSDARP00000108333	zf-C2H2	PF00096.26	1.4e-45	3	6
ENSDARP00000108333	zf-C2H2	PF00096.26	1.4e-45	4	6
ENSDARP00000108333	zf-C2H2	PF00096.26	1.4e-45	5	6
ENSDARP00000108333	zf-C2H2	PF00096.26	1.4e-45	6	6
ENSDARP00000108333	zf-met	PF12874.7	5.5e-06	1	2
ENSDARP00000108333	zf-met	PF12874.7	5.5e-06	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000125158	-	3102	XM_009292104	ENSDARP00000108333	1008 (aa)	XP_009290379	F1QUN0

Gene Model

Click here to download ENSDARG00000087074's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000087074's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000087074	znf574	72	36.041	ENSDARG00000077143	znf526	65	37.500

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000087074	znf574	100	49.247	ENSORLG00000013344	znf574	100	55.218	Oryzias_latipes
ENSDARG00000087074	znf574	100	50.847	ENSOMEG00000015669	znf574	100	49.846	Oryzias_melastigma

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0046872	metal ion binding	-	IEA	Function
GO:0060216	definitive hemopoiesis	21228005.	IMP	Process