EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000087145 (Gene tree)
Gene ID: 564886
Gene Symbol: si:ch1073-296d18.1
Alias: -
Full Name: si:ch1073-296d18.1
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 25475 bases
Position: chr19:11952309-11977783
Accession: ZDB-GENE-120215-181
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000108181	PARP	PF00644.20	1e-31	1	1
ENSDARP00000146826	PARP	PF00644.20	3.8e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000123409	-	1972	-	ENSDARP00000108181	581 (aa)	-	E7F8U3
ENSDART00000183337	-	6785	XM_021468291	ENSDARP00000146826	1178 (aa)	XP_021323966	A0A2R8RJW1

Gene Model

Click here to download ENSDARG00000087145's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000087145's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000087145	si:ch1073-296d18.1	54	33.333	ENSDARG00000099377	si:cabz01030277.1	58	33.645
ENSDARG00000087145	si:ch1073-296d18.1	95	100.000	ENSDARG00000034178	cpsf1	99	100.000
ENSDARG00000087145	si:ch1073-296d18.1	55	33.038	ENSDARG00000105415	si:ch211-163c2.1	62	33.038
ENSDARG00000087145	si:ch1073-296d18.1	50	33.779	ENSDARG00000040445	si:ch211-219a4.3	54	33.779

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000087145	si:ch1073-296d18.1	68	53.297	ENSG00000178685	PARP10	73	53.297	Homo_sapiens
ENSDARG00000087145	si:ch1073-296d18.1	92	45.356	ENSAPOG00000016910	si:ch1073-296d18.1	99	45.987	Acanthochromis_polyacanthus
ENSDARG00000087145	si:ch1073-296d18.1	57	50.301	ENSACIG00000006093	-	99	50.301	Amphilophus_citrinellus
ENSDARG00000087145	si:ch1073-296d18.1	62	71.000	ENSAOCG00000007023	-	98	71.000	Amphiprion_ocellaris
ENSDARG00000087145	si:ch1073-296d18.1	99	50.500	ENSAPEG00000005731	si:ch1073-296d18.1	99	50.391	Amphiprion_percula
ENSDARG00000087145	si:ch1073-296d18.1	92	44.563	ENSATEG00000011078	si:ch1073-296d18.1	99	44.544	Anabas_testudineus
ENSDARG00000087145	si:ch1073-296d18.1	67	51.099	ENSANAG00000037218	PARP10	75	51.099	Aotus_nancymaae
ENSDARG00000087145	si:ch1073-296d18.1	73	60.082	ENSACLG00000012196	-	99	60.082	Astatotilapia_calliptera
ENSDARG00000087145	si:ch1073-296d18.1	99	62.521	ENSAMXG00000039891	si:ch1073-296d18.1	99	53.764	Astyanax_mexicanus
ENSDARG00000087145	si:ch1073-296d18.1	65	51.111	ENSBTAG00000009677	PARP10	76	51.111	Bos_taurus
ENSDARG00000087145	si:ch1073-296d18.1	66	51.667	ENSCHIG00000008072	PARP10	78	51.667	Capra_hircus
ENSDARG00000087145	si:ch1073-296d18.1	69	52.198	ENSCPOG00000014235	PARP10	79	52.198	Cavia_porcellus
ENSDARG00000087145	si:ch1073-296d18.1	66	51.381	ENSCCAG00000024610	PARP10	74	51.381	Cebus_capucinus
ENSDARG00000087145	si:ch1073-296d18.1	68	53.297	ENSCATG00000025822	PARP10	73	53.297	Cercocebus_atys
ENSDARG00000087145	si:ch1073-296d18.1	67	53.297	ENSCSAG00000008843	PARP10	73	53.297	Chlorocebus_sabaeus
ENSDARG00000087145	si:ch1073-296d18.1	99	37.763	ENSCPBG00000004075	PARP10	97	34.916	Chrysemys_picta_bellii
ENSDARG00000087145	si:ch1073-296d18.1	68	53.297	ENSCANG00000043564	PARP10	73	53.297	Colobus_angolensis_palliatus
ENSDARG00000087145	si:ch1073-296d18.1	67	53.191	ENSCGRG00001012953	Parp10	76	53.191	Cricetulus_griseus_chok1gshd
ENSDARG00000087145	si:ch1073-296d18.1	67	53.191	ENSCGRG00000003088	Parp10	76	53.191	Cricetulus_griseus_crigri
ENSDARG00000087145	si:ch1073-296d18.1	50	52.414	ENSCSEG00000013448	-	98	52.414	Cynoglossus_semilaevis
ENSDARG00000087145	si:ch1073-296d18.1	86	60.656	ENSCVAG00000014098	-	99	60.656	Cyprinodon_variegatus
ENSDARG00000087145	si:ch1073-296d18.1	66	47.826	ENSDNOG00000046110	PARP10	74	47.826	Dasypus_novemcinctus
ENSDARG00000087145	si:ch1073-296d18.1	59	46.729	ENSEBUG00000008834	-	52	46.729	Eptatretus_burgeri
ENSDARG00000087145	si:ch1073-296d18.1	68	53.846	ENSEASG00005009729	PARP10	77	53.846	Equus_asinus_asinus
ENSDARG00000087145	si:ch1073-296d18.1	59	47.802	ENSEEUG00000005507	PARP10	71	47.802	Erinaceus_europaeus
ENSDARG00000087145	si:ch1073-296d18.1	99	51.920	ENSELUG00000001455	si:ch1073-296d18.1	76	74.684	Esox_lucius
ENSDARG00000087145	si:ch1073-296d18.1	56	51.500	ENSFHEG00000016698	-	99	51.500	Fundulus_heteroclitus
ENSDARG00000087145	si:ch1073-296d18.1	68	67.500	ENSGMOG00000000853	si:ch1073-296d18.1	79	67.500	Gadus_morhua
ENSDARG00000087145	si:ch1073-296d18.1	77	55.991	ENSGAFG00000018899	-	95	55.991	Gambusia_affinis
ENSDARG00000087145	si:ch1073-296d18.1	77	64.486	ENSGACG00000008798	si:ch1073-296d18.1	86	64.486	Gasterosteus_aculeatus
ENSDARG00000087145	si:ch1073-296d18.1	68	53.297	ENSGGOG00000001802	PARP10	73	53.297	Gorilla_gorilla
ENSDARG00000087145	si:ch1073-296d18.1	77	57.391	ENSHBUG00000018913	-	91	57.391	Haplochromis_burtoni
ENSDARG00000087145	si:ch1073-296d18.1	68	51.099	ENSHGLG00000010423	PARP10	72	51.099	Heterocephalus_glaber_female
ENSDARG00000087145	si:ch1073-296d18.1	99	57.633	ENSIPUG00000011187	parp10	99	53.401	Ictalurus_punctatus
ENSDARG00000087145	si:ch1073-296d18.1	67	52.174	ENSJJAG00000017801	Parp10	81	52.174	Jaculus_jaculus
ENSDARG00000087145	si:ch1073-296d18.1	99	49.421	ENSKMAG00000002066	si:ch1073-296d18.1	99	46.996	Kryptolebias_marmoratus
ENSDARG00000087145	si:ch1073-296d18.1	99	49.103	ENSLBEG00000003798	si:ch1073-296d18.1	97	73.118	Labrus_bergylta
ENSDARG00000087145	si:ch1073-296d18.1	67	48.711	ENSLBEG00000010052	-	99	48.711	Labrus_bergylta
ENSDARG00000087145	si:ch1073-296d18.1	71	50.000	ENSLACG00000008645	PARP10	94	48.168	Latimeria_chalumnae
ENSDARG00000087145	si:ch1073-296d18.1	92	70.769	ENSLOCG00000008505	si:ch1073-296d18.1	98	70.769	Lepisosteus_oculatus
ENSDARG00000087145	si:ch1073-296d18.1	63	52.000	ENSLAFG00000004191	PARP10	72	52.000	Loxodonta_africana
ENSDARG00000087145	si:ch1073-296d18.1	68	53.297	ENSMFAG00000044942	PARP10	73	53.297	Macaca_fascicularis
ENSDARG00000087145	si:ch1073-296d18.1	68	53.297	ENSMMUG00000000449	PARP10	72	53.297	Macaca_mulatta
ENSDARG00000087145	si:ch1073-296d18.1	68	53.297	ENSMNEG00000034827	PARP10	73	53.297	Macaca_nemestrina
ENSDARG00000087145	si:ch1073-296d18.1	63	57.600	ENSMLEG00000024662	PARP10	73	57.600	Mandrillus_leucophaeus
ENSDARG00000087145	si:ch1073-296d18.1	99	50.736	ENSMAMG00000003770	si:ch1073-296d18.1	98	45.212	Mastacembelus_armatus
ENSDARG00000087145	si:ch1073-296d18.1	77	57.609	ENSMZEG00005001245	-	91	57.609	Maylandia_zebra
ENSDARG00000087145	si:ch1073-296d18.1	66	52.222	ENSMICG00000016227	PARP10	75	52.222	Microcebus_murinus
ENSDARG00000087145	si:ch1073-296d18.1	68	51.010	ENSMOCG00000000179	Parp10	77	51.010	Microtus_ochrogaster
ENSDARG00000087145	si:ch1073-296d18.1	77	44.589	ENSMODG00000010393	-	82	44.589	Monodelphis_domestica
ENSDARG00000087145	si:ch1073-296d18.1	57	53.313	ENSMALG00000020513	-	99	53.313	Monopterus_albus
ENSDARG00000087145	si:ch1073-296d18.1	69	50.952	MGP_CAROLIEiJ_G0019914	Parp10	95	60.000	Mus_caroli
ENSDARG00000087145	si:ch1073-296d18.1	70	51.429	ENSMUSG00000063268	Parp10	95	60.000	Mus_musculus
ENSDARG00000087145	si:ch1073-296d18.1	69	50.711	MGP_PahariEiJ_G0019924	Parp10	96	58.491	Mus_pahari
ENSDARG00000087145	si:ch1073-296d18.1	70	51.429	MGP_SPRETEiJ_G0020817	Parp10	95	60.000	Mus_spretus
ENSDARG00000087145	si:ch1073-296d18.1	66	56.044	ENSNGAG00000023968	Parp10	77	56.044	Nannospalax_galili
ENSDARG00000087145	si:ch1073-296d18.1	86	71.429	ENSNBRG00000000940	si:ch1073-296d18.1	97	71.429	Neolamprologus_brichardi
ENSDARG00000087145	si:ch1073-296d18.1	67	54.444	ENSNLEG00000002423	PARP10	72	54.444	Nomascus_leucogenys
ENSDARG00000087145	si:ch1073-296d18.1	52	47.826	ENSOPRG00000015616	-	59	47.826	Ochotona_princeps
ENSDARG00000087145	si:ch1073-296d18.1	67	52.747	ENSODEG00000014276	PARP10	77	52.747	Octodon_degus
ENSDARG00000087145	si:ch1073-296d18.1	89	66.512	ENSONIG00000007669	si:ch1073-296d18.1	96	66.512	Oreochromis_niloticus
ENSDARG00000087145	si:ch1073-296d18.1	62	50.532	ENSOANG00000013123	-	90	50.532	Ornithorhynchus_anatinus
ENSDARG00000087145	si:ch1073-296d18.1	99	48.087	ENSORLG00015010006	si:ch1073-296d18.1	98	42.844	Oryzias_latipes_hsok
ENSDARG00000087145	si:ch1073-296d18.1	91	41.705	ENSOMEG00000011731	si:ch1073-296d18.1	99	41.962	Oryzias_melastigma
ENSDARG00000087145	si:ch1073-296d18.1	66	50.556	ENSOARG00000015581	PARP10	76	50.556	Ovis_aries
ENSDARG00000087145	si:ch1073-296d18.1	68	53.846	ENSPANG00000023348	PARP10	73	53.846	Papio_anubis
ENSDARG00000087145	si:ch1073-296d18.1	54	54.375	ENSPKIG00000002515	-	100	54.375	Paramormyrops_kingsleyae
ENSDARG00000087145	si:ch1073-296d18.1	93	68.421	ENSPFOG00000013067	si:ch1073-296d18.1	98	68.421	Poecilia_formosa
ENSDARG00000087145	si:ch1073-296d18.1	76	69.849	ENSPLAG00000022710	-	87	69.849	Poecilia_latipinna
ENSDARG00000087145	si:ch1073-296d18.1	76	69.849	ENSPMEG00000019504	-	86	69.849	Poecilia_mexicana
ENSDARG00000087145	si:ch1073-296d18.1	58	43.402	ENSPREG00000016264	-	92	43.402	Poecilia_reticulata
ENSDARG00000087145	si:ch1073-296d18.1	67	53.297	ENSPPYG00000018955	PARP10	76	53.297	Pongo_abelii
ENSDARG00000087145	si:ch1073-296d18.1	55	53.297	ENSPCAG00000001115	PARP10	71	53.297	Procavia_capensis
ENSDARG00000087145	si:ch1073-296d18.1	67	52.432	ENSPCOG00000028616	PARP10	76	52.432	Propithecus_coquereli
ENSDARG00000087145	si:ch1073-296d18.1	63	55.144	ENSPNYG00000005086	-	99	55.144	Pundamilia_nyererei
ENSDARG00000087145	si:ch1073-296d18.1	100	61.824	ENSPNAG00000024484	si:ch1073-296d18.1	99	53.922	Pygocentrus_nattereri
ENSDARG00000087145	si:ch1073-296d18.1	67	55.026	ENSRNOG00000004361	Parp10	76	55.026	Rattus_norvegicus
ENSDARG00000087145	si:ch1073-296d18.1	68	53.846	ENSRBIG00000040506	PARP10	73	53.846	Rhinopithecus_bieti
ENSDARG00000087145	si:ch1073-296d18.1	68	53.297	ENSRROG00000039086	PARP10	71	53.297	Rhinopithecus_roxellana
ENSDARG00000087145	si:ch1073-296d18.1	68	50.276	ENSSBOG00000008301	PARP10	79	50.276	Saimiri_boliviensis_boliviensis
ENSDARG00000087145	si:ch1073-296d18.1	52	56.106	ENSSFOG00015005222	-	87	56.106	Scleropages_formosus
ENSDARG00000087145	si:ch1073-296d18.1	99	49.256	ENSSMAG00000020545	-	99	49.256	Scophthalmus_maximus
ENSDARG00000087145	si:ch1073-296d18.1	87	57.143	ENSSLDG00000003545	-	99	57.143	Seriola_lalandi_dorsalis
ENSDARG00000087145	si:ch1073-296d18.1	56	72.500	ENSSPAG00000005439	-	99	72.500	Stegastes_partitus
ENSDARG00000087145	si:ch1073-296d18.1	99	35.319	ENSTNIG00000014023	si:ch1073-296d18.1	99	35.319	Tetraodon_nigroviridis
ENSDARG00000087145	si:ch1073-296d18.1	74	50.000	ENSTTRG00000006314	PARP10	86	50.000	Tursiops_truncatus
ENSDARG00000087145	si:ch1073-296d18.1	85	59.514	ENSXCOG00000003615	-	99	52.339	Xiphophorus_couchianus
ENSDARG00000087145	si:ch1073-296d18.1	76	69.347	ENSXMAG00000025112	-	86	69.347	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0003950	NAD+ ADP-ribosyltransferase activity	-	IEA	Function
GO:0016740	transferase activity	-	IEA	Function
GO:0016757	transferase activity, transferring glycosyl groups	-	IEA	Function