EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000088246 (Gene tree)
Gene ID: 373077
Gene Symbol: thoc1
Alias: p84
Full Name: THO complex 1
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 18047 bases
Position: chr2:2772447-2790493
Accession: ZDB-GENE-030826-9
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000105643	efThoc1	PF11957.8	3e-143	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000124882	-	2094	-	ENSDARP00000105643	655 (aa)	-	F1QY90

Gene Model

Click here to download ENSDARG00000088246's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03013	RNA transport	KEGG
dre03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000088246's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000088246	thoc1	99	74.809	ENSG00000079134	THOC1	99	81.985	Homo_sapiens
ENSDARG00000088246	thoc1	99	74.962	ENSAMEG00000006645	THOC1	99	74.962	Ailuropoda_melanoleuca
ENSDARG00000088246	thoc1	94	83.388	ENSACIG00000019392	thoc1	95	83.388	Amphilophus_citrinellus
ENSDARG00000088246	thoc1	99	79.601	ENSAOCG00000008391	thoc1	99	79.601	Amphiprion_ocellaris
ENSDARG00000088246	thoc1	99	84.049	ENSAPEG00000001093	thoc1	99	84.049	Amphiprion_percula
ENSDARG00000088246	thoc1	99	84.509	ENSATEG00000004783	thoc1	99	84.509	Anabas_testudineus
ENSDARG00000088246	thoc1	99	73.201	ENSAPLG00000016149	THOC1	98	73.201	Anas_platyrhynchos
ENSDARG00000088246	thoc1	99	74.771	ENSACAG00000008307	THOC1	96	74.771	Anolis_carolinensis
ENSDARG00000088246	thoc1	99	74.169	ENSANAG00000033200	THOC1	99	74.169	Aotus_nancymaae
ENSDARG00000088246	thoc1	99	83.436	ENSACLG00000016836	thoc1	99	83.436	Astatotilapia_calliptera
ENSDARG00000088246	thoc1	94	81.120	ENSAMXG00000014708	thoc1	97	81.120	Astyanax_mexicanus
ENSDARG00000088246	thoc1	99	74.962	ENSBTAG00000019215	THOC1	99	74.962	Bos_taurus
ENSDARG00000088246	thoc1	65	36.636	WBGene00020172	thoc-1	68	36.226	Caenorhabditis_elegans
ENSDARG00000088246	thoc1	99	74.962	ENSCJAG00000020450	THOC1	99	74.962	Callithrix_jacchus
ENSDARG00000088246	thoc1	99	74.962	ENSCAFG00000018324	THOC1	99	74.962	Canis_familiaris
ENSDARG00000088246	thoc1	99	74.962	ENSCAFG00020017894	THOC1	99	74.962	Canis_lupus_dingo
ENSDARG00000088246	thoc1	99	74.962	ENSCHIG00000015399	THOC1	99	74.962	Capra_hircus
ENSDARG00000088246	thoc1	99	74.809	ENSTSYG00000010585	THOC1	98	74.809	Carlito_syrichta
ENSDARG00000088246	thoc1	97	54.147	ENSCAPG00000016270	THOC1	97	54.147	Cavia_aperea
ENSDARG00000088246	thoc1	99	73.579	ENSCPOG00000000959	THOC1	98	73.579	Cavia_porcellus
ENSDARG00000088246	thoc1	99	74.962	ENSCCAG00000025766	THOC1	99	74.962	Cebus_capucinus
ENSDARG00000088246	thoc1	99	72.366	ENSCATG00000028180	THOC1	96	78.902	Cercocebus_atys
ENSDARG00000088246	thoc1	97	74.686	ENSCLAG00000009117	THOC1	99	74.686	Chinchilla_lanigera
ENSDARG00000088246	thoc1	99	74.962	ENSCSAG00000017631	THOC1	99	74.962	Chlorocebus_sabaeus
ENSDARG00000088246	thoc1	78	77.083	ENSCHOG00000010609	THOC1	77	77.083	Choloepus_hoffmanni
ENSDARG00000088246	thoc1	99	74.924	ENSCPBG00000027558	THOC1	99	74.924	Chrysemys_picta_bellii
ENSDARG00000088246	thoc1	74	48.889	ENSCING00000007663	-	99	48.889	Ciona_intestinalis
ENSDARG00000088246	thoc1	94	48.504	ENSCSAVG00000010649	-	99	48.504	Ciona_savignyi
ENSDARG00000088246	thoc1	99	74.809	ENSCANG00000034265	THOC1	96	79.532	Colobus_angolensis_palliatus
ENSDARG00000088246	thoc1	99	74.809	ENSCGRG00001016464	Thoc1	99	74.809	Cricetulus_griseus_chok1gshd
ENSDARG00000088246	thoc1	90	61.121	ENSCGRG00000003390	-	98	61.121	Cricetulus_griseus_crigri
ENSDARG00000088246	thoc1	98	74.613	ENSCGRG00000010269	-	99	75.472	Cricetulus_griseus_crigri
ENSDARG00000088246	thoc1	99	80.945	ENSCSEG00000012486	thoc1	99	82.958	Cynoglossus_semilaevis
ENSDARG00000088246	thoc1	100	81.832	ENSCVAG00000020600	thoc1	100	81.832	Cyprinodon_variegatus
ENSDARG00000088246	thoc1	99	74.465	ENSDNOG00000019217	THOC1	99	74.465	Dasypus_novemcinctus
ENSDARG00000088246	thoc1	97	71.069	ENSDORG00000008060	Thoc1	98	71.069	Dipodomys_ordii
ENSDARG00000088246	thoc1	99	37.216	FBgn0037382	Hpr1	96	36.932	Drosophila_melanogaster
ENSDARG00000088246	thoc1	90	57.191	ENSETEG00000004165	THOC1	99	57.191	Echinops_telfairi
ENSDARG00000088246	thoc1	92	63.245	ENSEBUG00000005998	thoc1	98	64.570	Eptatretus_burgeri
ENSDARG00000088246	thoc1	99	74.504	ENSEASG00005002549	THOC1	95	74.504	Equus_asinus_asinus
ENSDARG00000088246	thoc1	99	74.962	ENSECAG00000009267	THOC1	89	74.962	Equus_caballus
ENSDARG00000088246	thoc1	79	59.574	ENSEEUG00000012214	-	81	59.574	Erinaceus_europaeus
ENSDARG00000088246	thoc1	100	83.714	ENSELUG00000023277	thoc1	100	83.714	Esox_lucius
ENSDARG00000088246	thoc1	99	74.962	ENSFCAG00000022454	THOC1	86	74.962	Felis_catus
ENSDARG00000088246	thoc1	97	74.571	ENSFALG00000006205	THOC1	99	74.571	Ficedula_albicollis
ENSDARG00000088246	thoc1	98	74.534	ENSFDAG00000006842	THOC1	99	74.534	Fukomys_damarensis
ENSDARG00000088246	thoc1	100	82.443	ENSFHEG00000008841	thoc1	100	82.443	Fundulus_heteroclitus
ENSDARG00000088246	thoc1	99	82.280	ENSGMOG00000011486	thoc1	99	82.280	Gadus_morhua
ENSDARG00000088246	thoc1	99	73.853	ENSGALG00000014915	THOC1	99	72.961	Gallus_gallus
ENSDARG00000088246	thoc1	100	81.985	ENSGAFG00000021464	thoc1	99	83.016	Gambusia_affinis
ENSDARG00000088246	thoc1	99	83.051	ENSGACG00000017361	thoc1	99	83.051	Gasterosteus_aculeatus
ENSDARG00000088246	thoc1	99	74.924	ENSGAGG00000021230	-	97	74.924	Gopherus_agassizii
ENSDARG00000088246	thoc1	99	74.809	ENSGGOG00000003013	THOC1	98	74.809	Gorilla_gorilla
ENSDARG00000088246	thoc1	99	83.742	ENSHBUG00000009096	thoc1	99	83.742	Haplochromis_burtoni
ENSDARG00000088246	thoc1	70	68.421	ENSHGLG00000009264	-	98	68.421	Heterocephalus_glaber_female
ENSDARG00000088246	thoc1	99	73.733	ENSHGLG00000003712	-	98	73.733	Heterocephalus_glaber_female
ENSDARG00000088246	thoc1	99	73.886	ENSHGLG00100003570	THOC1	98	73.886	Heterocephalus_glaber_male
ENSDARG00000088246	thoc1	68	68.984	ENSHGLG00100002225	-	98	59.788	Heterocephalus_glaber_male
ENSDARG00000088246	thoc1	99	73.994	ENSIPUG00000005306	thoc1	100	73.994	Ictalurus_punctatus
ENSDARG00000088246	thoc1	99	74.656	ENSSTOG00000006484	THOC1	99	74.656	Ictidomys_tridecemlineatus
ENSDARG00000088246	thoc1	52	75.146	ENSJJAG00000014893	-	96	75.146	Jaculus_jaculus
ENSDARG00000088246	thoc1	99	81.902	ENSKMAG00000003904	thoc1	99	81.902	Kryptolebias_marmoratus
ENSDARG00000088246	thoc1	99	82.362	ENSLBEG00000020372	thoc1	98	82.362	Labrus_bergylta
ENSDARG00000088246	thoc1	99	74.465	ENSLACG00000014869	THOC1	99	74.465	Latimeria_chalumnae
ENSDARG00000088246	thoc1	99	81.832	ENSLOCG00000002097	thoc1	99	81.832	Lepisosteus_oculatus
ENSDARG00000088246	thoc1	99	74.962	ENSLAFG00000009585	THOC1	99	74.962	Loxodonta_africana
ENSDARG00000088246	thoc1	99	74.962	ENSMFAG00000041520	THOC1	98	74.962	Macaca_fascicularis
ENSDARG00000088246	thoc1	99	74.962	ENSMMUG00000004662	THOC1	99	74.962	Macaca_mulatta
ENSDARG00000088246	thoc1	99	74.962	ENSMNEG00000040177	THOC1	98	74.962	Macaca_nemestrina
ENSDARG00000088246	thoc1	99	74.962	ENSMLEG00000034201	THOC1	98	74.962	Mandrillus_leucophaeus
ENSDARG00000088246	thoc1	96	83.413	ENSMAMG00000016747	thoc1	100	83.413	Mastacembelus_armatus
ENSDARG00000088246	thoc1	99	83.436	ENSMZEG00005024609	thoc1	99	83.436	Maylandia_zebra
ENSDARG00000088246	thoc1	97	73.865	ENSMGAG00000009811	THOC1	99	73.865	Meleagris_gallopavo
ENSDARG00000088246	thoc1	99	74.504	ENSMAUG00000010272	Thoc1	99	74.504	Mesocricetus_auratus
ENSDARG00000088246	thoc1	99	75.267	ENSMICG00000027200	THOC1	99	75.267	Microcebus_murinus
ENSDARG00000088246	thoc1	99	73.588	ENSMOCG00000014536	-	86	73.588	Microtus_ochrogaster
ENSDARG00000088246	thoc1	99	65.091	ENSMOCG00000014924	-	96	65.091	Microtus_ochrogaster
ENSDARG00000088246	thoc1	93	84.477	ENSMMOG00000011772	thoc1	100	84.477	Mola_mola
ENSDARG00000088246	thoc1	99	73.374	ENSMODG00000021482	THOC1	99	73.374	Monodelphis_domestica
ENSDARG00000088246	thoc1	99	83.180	ENSMALG00000021872	thoc1	100	83.053	Monopterus_albus
ENSDARG00000088246	thoc1	99	74.351	MGP_CAROLIEiJ_G0021989	Thoc1	99	74.351	Mus_caroli
ENSDARG00000088246	thoc1	99	74.198	ENSMUSG00000024287	Thoc1	99	74.198	Mus_musculus
ENSDARG00000088246	thoc1	99	74.198	MGP_PahariEiJ_G0018726	Thoc1	99	74.198	Mus_pahari
ENSDARG00000088246	thoc1	99	74.198	MGP_SPRETEiJ_G0022905	Thoc1	99	74.198	Mus_spretus
ENSDARG00000088246	thoc1	99	74.962	ENSMPUG00000005448	THOC1	99	74.962	Mustela_putorius_furo
ENSDARG00000088246	thoc1	61	66.917	ENSMLUG00000024912	-	100	66.917	Myotis_lucifugus
ENSDARG00000088246	thoc1	90	68.121	ENSMLUG00000027965	-	99	68.342	Myotis_lucifugus
ENSDARG00000088246	thoc1	99	73.588	ENSMLUG00000004090	-	99	73.588	Myotis_lucifugus
ENSDARG00000088246	thoc1	99	74.809	ENSNGAG00000001401	-	99	74.809	Nannospalax_galili
ENSDARG00000088246	thoc1	97	59.969	ENSNGAG00000008061	-	97	59.969	Nannospalax_galili
ENSDARG00000088246	thoc1	97	83.150	ENSNBRG00000005991	thoc1	96	83.150	Neolamprologus_brichardi
ENSDARG00000088246	thoc1	99	74.962	ENSNLEG00000006835	THOC1	99	74.962	Nomascus_leucogenys
ENSDARG00000088246	thoc1	89	77.516	ENSMEUG00000009756	THOC1	91	77.516	Notamacropus_eugenii
ENSDARG00000088246	thoc1	99	60.611	ENSOPRG00000001108	THOC1	99	60.611	Ochotona_princeps
ENSDARG00000088246	thoc1	99	68.817	ENSODEG00000006623	THOC1	98	68.817	Octodon_degus
ENSDARG00000088246	thoc1	99	83.896	ENSONIG00000009440	thoc1	99	83.742	Oreochromis_niloticus
ENSDARG00000088246	thoc1	99	74.656	ENSOCUG00000011601	THOC1	99	74.656	Oryctolagus_cuniculus
ENSDARG00000088246	thoc1	99	84.356	ENSORLG00000017629	thoc1	99	84.356	Oryzias_latipes
ENSDARG00000088246	thoc1	99	84.202	ENSORLG00020007567	thoc1	99	84.202	Oryzias_latipes_hni
ENSDARG00000088246	thoc1	99	84.202	ENSORLG00015007356	thoc1	99	84.202	Oryzias_latipes_hsok
ENSDARG00000088246	thoc1	99	82.822	ENSOMEG00000008200	thoc1	99	83.589	Oryzias_melastigma
ENSDARG00000088246	thoc1	99	72.061	ENSOGAG00000000470	THOC1	99	72.061	Otolemur_garnettii
ENSDARG00000088246	thoc1	99	74.387	ENSOARG00000009238	THOC1	98	74.387	Ovis_aries
ENSDARG00000088246	thoc1	99	74.962	ENSPPAG00000031812	THOC1	98	74.962	Pan_paniscus
ENSDARG00000088246	thoc1	99	74.351	ENSPPRG00000023794	THOC1	96	78.613	Panthera_pardus
ENSDARG00000088246	thoc1	99	74.351	ENSPTIG00000007469	THOC1	96	78.613	Panthera_tigris_altaica
ENSDARG00000088246	thoc1	99	74.018	ENSPTRG00000009816	THOC1	99	74.018	Pan_troglodytes
ENSDARG00000088246	thoc1	99	74.052	ENSPANG00000008665	THOC1	99	74.052	Papio_anubis
ENSDARG00000088246	thoc1	99	82.389	ENSPKIG00000005906	thoc1	99	83.002	Paramormyrops_kingsleyae
ENSDARG00000088246	thoc1	80	78.598	ENSPSIG00000007691	THOC1	97	78.598	Pelodiscus_sinensis
ENSDARG00000088246	thoc1	95	81.180	ENSPMGG00000008279	thoc1	96	81.180	Periophthalmus_magnuspinnatus
ENSDARG00000088246	thoc1	99	74.351	ENSPEMG00000021789	Thoc1	99	74.351	Peromyscus_maniculatus_bairdii
ENSDARG00000088246	thoc1	74	74.286	ENSPCIG00000026942	THOC1	97	74.286	Phascolarctos_cinereus
ENSDARG00000088246	thoc1	100	81.985	ENSPFOG00000011673	thoc1	100	81.985	Poecilia_formosa
ENSDARG00000088246	thoc1	100	82.137	ENSPLAG00000019648	thoc1	100	82.137	Poecilia_latipinna
ENSDARG00000088246	thoc1	100	82.137	ENSPMEG00000007083	thoc1	100	82.137	Poecilia_mexicana
ENSDARG00000088246	thoc1	100	81.985	ENSPREG00000006719	thoc1	100	81.985	Poecilia_reticulata
ENSDARG00000088246	thoc1	75	78.528	ENSPPYG00000009049	-	99	78.528	Pongo_abelii
ENSDARG00000088246	thoc1	92	75.720	ENSPCAG00000005320	THOC1	91	75.720	Procavia_capensis
ENSDARG00000088246	thoc1	99	74.504	ENSPCOG00000009234	THOC1	99	74.504	Propithecus_coquereli
ENSDARG00000088246	thoc1	99	73.130	ENSPVAG00000004007	THOC1	99	73.130	Pteropus_vampyrus
ENSDARG00000088246	thoc1	99	83.742	ENSPNYG00000019152	thoc1	99	83.742	Pundamilia_nyererei
ENSDARG00000088246	thoc1	99	87.730	ENSPNAG00000023390	thoc1	99	87.730	Pygocentrus_nattereri
ENSDARG00000088246	thoc1	89	52.811	ENSRNOG00000015332	Thoc1	94	52.721	Rattus_norvegicus
ENSDARG00000088246	thoc1	99	74.169	ENSRBIG00000033738	THOC1	99	77.241	Rhinopithecus_bieti
ENSDARG00000088246	thoc1	99	74.962	ENSRROG00000044988	THOC1	96	79.532	Rhinopithecus_roxellana
ENSDARG00000088246	thoc1	99	74.656	ENSSBOG00000016556	THOC1	98	74.656	Saimiri_boliviensis_boliviensis
ENSDARG00000088246	thoc1	99	74.351	ENSSHAG00000014829	THOC1	99	74.351	Sarcophilus_harrisii
ENSDARG00000088246	thoc1	99	84.816	ENSSFOG00015021527	thoc1	99	84.816	Scleropages_formosus
ENSDARG00000088246	thoc1	99	82.290	ENSSMAG00000018465	thoc1	99	82.290	Scophthalmus_maximus
ENSDARG00000088246	thoc1	99	84.356	ENSSDUG00000016810	thoc1	99	84.356	Seriola_dumerili
ENSDARG00000088246	thoc1	99	84.049	ENSSLDG00000015555	thoc1	99	84.049	Seriola_lalandi_dorsalis
ENSDARG00000088246	thoc1	87	74.046	ENSSARG00000006910	THOC1	87	74.046	Sorex_araneus
ENSDARG00000088246	thoc1	98	74.495	ENSSPUG00000007238	THOC1	99	74.040	Sphenodon_punctatus
ENSDARG00000088246	thoc1	99	81.498	ENSSPAG00000018847	thoc1	99	81.498	Stegastes_partitus
ENSDARG00000088246	thoc1	99	74.962	ENSSSCG00000025653	THOC1	93	74.962	Sus_scrofa
ENSDARG00000088246	thoc1	99	74.771	ENSTGUG00000010204	THOC1	99	74.771	Taeniopygia_guttata
ENSDARG00000088246	thoc1	99	82.796	ENSTRUG00000013518	thoc1	99	82.796	Takifugu_rubripes
ENSDARG00000088246	thoc1	99	82.488	ENSTNIG00000008473	thoc1	99	82.488	Tetraodon_nigroviridis
ENSDARG00000088246	thoc1	99	67.634	ENSTBEG00000016920	THOC1	99	67.634	Tupaia_belangeri
ENSDARG00000088246	thoc1	99	69.008	ENSTTRG00000016664	THOC1	99	69.008	Tursiops_truncatus
ENSDARG00000088246	thoc1	99	74.962	ENSUAMG00000002527	THOC1	99	74.962	Ursus_americanus
ENSDARG00000088246	thoc1	99	74.962	ENSUMAG00000019693	THOC1	99	74.962	Ursus_maritimus
ENSDARG00000088246	thoc1	66	67.500	ENSVPAG00000003726	-	66	67.500	Vicugna_pacos
ENSDARG00000088246	thoc1	99	74.962	ENSVVUG00000004384	THOC1	99	74.962	Vulpes_vulpes
ENSDARG00000088246	thoc1	99	72.382	ENSXETG00000003155	thoc1	97	72.382	Xenopus_tropicalis
ENSDARG00000088246	thoc1	94	78.990	ENSXCOG00000016085	thoc1	89	78.990	Xiphophorus_couchianus
ENSDARG00000088246	thoc1	100	81.679	ENSXMAG00000002353	thoc1	100	81.679	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000347	THO complex	21873635.	IBA	Component
GO:0000445	THO complex part of transcription export complex	21873635.	IBA	Component
GO:0005634	nucleus	21873635.	IBA	Component
GO:0006406	mRNA export from nucleus	21873635.	IBA	Process
GO:0007165	signal transduction	-	IEA	Process
GO:0032784	regulation of DNA-templated transcription, elongation	21873635.	IBA	Process