EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000088881 (Gene tree)
Gene ID: 573741
Gene Symbol: si:dkeyp-69b9.3
Alias: -
Full Name: si:dkeyp-69b9.3
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 11682 bases
Position: chr16:13505064-13516745
Accession: ZDB-GENE-100922-275
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000118767	SAP	PF02037.27	1.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000145410	-	2756	XM_005157904	ENSDARP00000118767	621 (aa)	XP_005157961	F1QKM6

Gene Model

Click here to download ENSDARG00000088881's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000088881's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000088881	si:dkeyp-69b9.3	62	48.900	ENSAPOG00000015884	si:dkeyp-69b9.3	88	45.961	Acanthochromis_polyacanthus
ENSDARG00000088881	si:dkeyp-69b9.3	99	46.880	ENSACIG00000006038	si:dkeyp-69b9.3	82	49.820	Amphilophus_citrinellus
ENSDARG00000088881	si:dkeyp-69b9.3	90	44.112	ENSAOCG00000013303	si:dkeyp-69b9.3	85	46.545	Amphiprion_ocellaris
ENSDARG00000088881	si:dkeyp-69b9.3	99	48.372	ENSATEG00000022482	si:dkeyp-69b9.3	77	51.693	Anabas_testudineus
ENSDARG00000088881	si:dkeyp-69b9.3	89	64.234	ENSACLG00000021891	si:dkeyp-69b9.3	81	50.740	Astatotilapia_calliptera
ENSDARG00000088881	si:dkeyp-69b9.3	74	45.966	ENSCSEG00000018785	si:dkeyp-69b9.3	97	46.692	Cynoglossus_semilaevis
ENSDARG00000088881	si:dkeyp-69b9.3	100	43.788	ENSELUG00000015494	si:dkeyp-69b9.3	77	72.414	Esox_lucius
ENSDARG00000088881	si:dkeyp-69b9.3	99	52.006	ENSHBUG00000013698	si:dkeyp-69b9.3	81	50.592	Haplochromis_burtoni
ENSDARG00000088881	si:dkeyp-69b9.3	100	63.217	ENSIPUG00000007926	si:dkeyp-69b9.3	100	64.650	Ictalurus_punctatus
ENSDARG00000088881	si:dkeyp-69b9.3	68	55.515	ENSKMAG00000005463	si:dkeyp-69b9.3	65	54.015	Kryptolebias_marmoratus
ENSDARG00000088881	si:dkeyp-69b9.3	63	36.025	ENSLACG00000007289	si:dkeyp-69b9.3	81	46.875	Latimeria_chalumnae
ENSDARG00000088881	si:dkeyp-69b9.3	99	49.860	ENSMAMG00000019677	si:dkeyp-69b9.3	83	49.162	Mastacembelus_armatus
ENSDARG00000088881	si:dkeyp-69b9.3	89	64.234	ENSMZEG00005016499	si:dkeyp-69b9.3	81	50.737	Maylandia_zebra
ENSDARG00000088881	si:dkeyp-69b9.3	76	60.104	ENSMMOG00000016574	si:dkeyp-69b9.3	63	58.421	Mola_mola
ENSDARG00000088881	si:dkeyp-69b9.3	91	45.617	ENSMALG00000009733	si:dkeyp-69b9.3	94	46.816	Monopterus_albus
ENSDARG00000088881	si:dkeyp-69b9.3	99	51.645	ENSNBRG00000002905	si:dkeyp-69b9.3	81	50.442	Neolamprologus_brichardi
ENSDARG00000088881	si:dkeyp-69b9.3	99	48.844	ENSOMEG00000011151	si:dkeyp-69b9.3	87	49.773	Oryzias_melastigma
ENSDARG00000088881	si:dkeyp-69b9.3	99	57.500	ENSPKIG00000012523	si:dkeyp-69b9.3	80	56.899	Paramormyrops_kingsleyae
ENSDARG00000088881	si:dkeyp-69b9.3	86	47.016	ENSPMGG00000012158	si:dkeyp-69b9.3	91	46.984	Periophthalmus_magnuspinnatus
ENSDARG00000088881	si:dkeyp-69b9.3	96	47.833	ENSPFOG00000010279	si:dkeyp-69b9.3	85	48.726	Poecilia_formosa
ENSDARG00000088881	si:dkeyp-69b9.3	62	64.706	ENSPLAG00000004836	si:dkeyp-69b9.3	70	52.885	Poecilia_latipinna
ENSDARG00000088881	si:dkeyp-69b9.3	98	48.841	ENSPMEG00000002155	si:dkeyp-69b9.3	80	47.128	Poecilia_mexicana
ENSDARG00000088881	si:dkeyp-69b9.3	99	52.224	ENSPNYG00000001718	si:dkeyp-69b9.3	81	52.367	Pundamilia_nyererei
ENSDARG00000088881	si:dkeyp-69b9.3	100	64.399	ENSPNAG00000018127	si:dkeyp-69b9.3	100	64.399	Pygocentrus_nattereri
ENSDARG00000088881	si:dkeyp-69b9.3	87	57.772	ENSSFOG00015000936	si:dkeyp-69b9.3	96	60.102	Scleropages_formosus
ENSDARG00000088881	si:dkeyp-69b9.3	86	47.368	ENSSPAG00000016328	si:dkeyp-69b9.3	74	48.239	Stegastes_partitus
ENSDARG00000088881	si:dkeyp-69b9.3	86	45.766	ENSTRUG00000019579	si:dkeyp-69b9.3	89	43.841	Takifugu_rubripes
ENSDARG00000088881	si:dkeyp-69b9.3	79	50.000	ENSXETG00000030651	-	66	50.000	Xenopus_tropicalis
ENSDARG00000088881	si:dkeyp-69b9.3	99	48.212	ENSXMAG00000012042	si:dkeyp-69b9.3	80	47.781	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0051145	smooth muscle cell differentiation	21873635.	IBA	Process