EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000088927 (Gene tree)
Gene ID: 103911751
Gene Symbol: CR450793.1
Alias: -
Full Name: zinc finger protein 436-like
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 6396 bases
Position: chr10:26935155-26941550
Accession: 103911751
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000109023	zf-C2H2	PF00096.26	1.4e-34	1	7
ENSDARP00000109023	zf-C2H2	PF00096.26	1.4e-34	2	7
ENSDARP00000109023	zf-C2H2	PF00096.26	1.4e-34	3	7
ENSDARP00000109023	zf-C2H2	PF00096.26	1.4e-34	4	7
ENSDARP00000109023	zf-C2H2	PF00096.26	1.4e-34	5	7
ENSDARP00000109023	zf-C2H2	PF00096.26	1.4e-34	6	7
ENSDARP00000109023	zf-C2H2	PF00096.26	1.4e-34	7	7
ENSDARP00000109023	zf-met	PF12874.7	6.2e-06	1	1
ENSDARP00000109023	zf-C2H2_jaz	PF12171.8	1.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000129993	CR450793.1-201	4257	XM_009305347	ENSDARP00000109023	257 (aa)	XP_009303622	F1QII2

Gene Model

Click here to download ENSDARG00000088927's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000088927's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000088927	CR450793.1	95	47.150	ENSDARG00000088507	znf982	100	46.099
ENSDARG00000088927	CR450793.1	82	52.910	ENSDARG00000099618	si:dkey-1b17.6	89	56.250
ENSDARG00000088927	CR450793.1	97	44.398	ENSDARG00000115326	znf1002	91	45.228
ENSDARG00000088927	CR450793.1	93	55.689	ENSDARG00000098661	AL935300.3	72	55.689
ENSDARG00000088927	CR450793.1	95	46.053	ENSDARG00000094736	znf1157	95	58.929
ENSDARG00000088927	CR450793.1	97	42.222	ENSDARG00000106724	CU655961.3	94	42.222
ENSDARG00000088927	CR450793.1	95	46.429	ENSDARG00000111899	zgc:171435	89	46.429

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000088927	CR450793.1	81	38.863	ENSATEG00000024551	-	69	38.863	Anabas_testudineus
ENSDARG00000088927	CR450793.1	89	37.255	ENSAMXG00000037699	-	63	36.709	Astyanax_mexicanus
ENSDARG00000088927	CR450793.1	96	33.333	ENSLBEG00000014676	-	67	34.161	Labrus_bergylta
ENSDARG00000088927	CR450793.1	90	48.214	ENSMZEG00005013916	-	50	33.613	Maylandia_zebra
ENSDARG00000088927	CR450793.1	90	48.214	ENSPNYG00000007907	-	52	40.123	Pundamilia_nyererei