EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000089225 (Gene tree)
Gene ID: 568429
Gene Symbol: trove2
Alias: trove2|zgc:123046
Full Name: TROVE domain family%2C member 2
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 22322 bases
Position: chr2:11923615-11945936
Accession: ZDB-GENE-051113-300
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000105072	TROVE	PF05731.11	8.8e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000153873	-	1242	-	ENSDARP00000127589	263 (aa)	-	X1WBJ8
ENSDART00000126118	-	3007	-	ENSDARP00000105072	534 (aa)	-	F1QQM0

Gene Model

Click here to download ENSDARG00000089225's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000089225's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000089225	trove2	99	54.409	ENSG00000116747	RO60	99	54.409	Homo_sapiens
ENSDARG00000089225	trove2	94	59.725	ENSAPOG00000015903	trove2	95	59.725	Acanthochromis_polyacanthus
ENSDARG00000089225	trove2	99	53.947	ENSAMEG00000015881	TROVE2	99	53.947	Ailuropoda_melanoleuca
ENSDARG00000089225	trove2	94	43.787	ENSACIG00000002080	-	95	43.787	Amphilophus_citrinellus
ENSDARG00000089225	trove2	98	53.283	ENSACIG00000010149	trove2	99	53.283	Amphilophus_citrinellus
ENSDARG00000089225	trove2	94	60.039	ENSAOCG00000000143	trove2	95	60.039	Amphiprion_ocellaris
ENSDARG00000089225	trove2	94	59.725	ENSAPEG00000003310	trove2	95	59.725	Amphiprion_percula
ENSDARG00000089225	trove2	94	60.158	ENSATEG00000021195	trove2	100	58.011	Anabas_testudineus
ENSDARG00000089225	trove2	99	54.784	ENSAPLG00000003121	TROVE2	99	54.784	Anas_platyrhynchos
ENSDARG00000089225	trove2	94	55.621	ENSACAG00000008263	TROVE2	94	55.621	Anolis_carolinensis
ENSDARG00000089225	trove2	99	54.409	ENSANAG00000027305	TROVE2	99	54.409	Aotus_nancymaae
ENSDARG00000089225	trove2	100	49.644	ENSACLG00000012217	trove2	100	49.644	Astatotilapia_calliptera
ENSDARG00000089225	trove2	99	65.683	ENSAMXG00000002118	trove2	99	65.683	Astyanax_mexicanus
ENSDARG00000089225	trove2	99	54.034	ENSBTAG00000013812	TROVE2	62	54.034	Bos_taurus
ENSDARG00000089225	trove2	98	30.847	WBGene00004405	rop-1	91	30.847	Caenorhabditis_elegans
ENSDARG00000089225	trove2	99	54.409	ENSCJAG00000008566	TROVE2	99	54.409	Callithrix_jacchus
ENSDARG00000089225	trove2	98	54.511	ENSCAFG00000010552	TROVE2	96	54.511	Canis_familiaris
ENSDARG00000089225	trove2	97	54.563	ENSCAFG00020004457	TROVE2	99	54.563	Canis_lupus_dingo
ENSDARG00000089225	trove2	99	53.659	ENSCHIG00000018260	TROVE2	99	53.659	Capra_hircus
ENSDARG00000089225	trove2	100	53.974	ENSTSYG00000004227	TROVE2	100	53.974	Carlito_syrichta
ENSDARG00000089225	trove2	99	38.346	ENSCAPG00000009733	TROVE2	99	38.346	Cavia_aperea
ENSDARG00000089225	trove2	99	50.752	ENSCPOG00000000669	TROVE2	99	50.752	Cavia_porcellus
ENSDARG00000089225	trove2	84	56.901	ENSCCAG00000027978	TROVE2	99	56.901	Cebus_capucinus
ENSDARG00000089225	trove2	99	54.409	ENSCATG00000027732	TROVE2	99	54.409	Cercocebus_atys
ENSDARG00000089225	trove2	99	53.283	ENSCLAG00000016391	TROVE2	99	53.283	Chinchilla_lanigera
ENSDARG00000089225	trove2	99	54.409	ENSCSAG00000013402	TROVE2	99	54.409	Chlorocebus_sabaeus
ENSDARG00000089225	trove2	84	54.011	ENSCHOG00000009571	TROVE2	85	54.011	Choloepus_hoffmanni
ENSDARG00000089225	trove2	94	56.607	ENSCPBG00000010558	TROVE2	94	56.607	Chrysemys_picta_bellii
ENSDARG00000089225	trove2	99	54.409	ENSCANG00000041293	TROVE2	99	54.409	Colobus_angolensis_palliatus
ENSDARG00000089225	trove2	94	54.438	ENSCGRG00001016925	Trove2	94	54.438	Cricetulus_griseus_chok1gshd
ENSDARG00000089225	trove2	94	54.438	ENSCGRG00000003396	Trove2	94	54.438	Cricetulus_griseus_crigri
ENSDARG00000089225	trove2	99	54.494	ENSCSEG00000009989	trove2	98	54.494	Cynoglossus_semilaevis
ENSDARG00000089225	trove2	94	58.350	ENSCVAG00000008160	trove2	95	58.350	Cyprinodon_variegatus
ENSDARG00000089225	trove2	99	53.659	ENSDNOG00000002157	TROVE2	99	53.659	Dasypus_novemcinctus
ENSDARG00000089225	trove2	99	53.283	ENSDORG00000006152	Trove2	99	53.283	Dipodomys_ordii
ENSDARG00000089225	trove2	64	53.333	ENSETEG00000018261	TROVE2	100	53.333	Echinops_telfairi
ENSDARG00000089225	trove2	100	52.778	ENSEASG00005003388	TROVE2	100	52.778	Equus_asinus_asinus
ENSDARG00000089225	trove2	100	53.148	ENSECAG00000018653	TROVE2	100	53.148	Equus_caballus
ENSDARG00000089225	trove2	94	53.937	ENSEEUG00000014190	TROVE2	94	53.937	Erinaceus_europaeus
ENSDARG00000089225	trove2	96	60.311	ENSELUG00000004473	trove2	96	60.311	Esox_lucius
ENSDARG00000089225	trove2	99	54.409	ENSFCAG00000010161	TROVE2	99	54.409	Felis_catus
ENSDARG00000089225	trove2	97	55.491	ENSFALG00000002913	TROVE2	97	55.491	Ficedula_albicollis
ENSDARG00000089225	trove2	99	53.846	ENSFDAG00000015923	TROVE2	99	53.846	Fukomys_damarensis
ENSDARG00000089225	trove2	94	57.564	ENSFHEG00000016128	trove2	95	57.564	Fundulus_heteroclitus
ENSDARG00000089225	trove2	99	54.221	ENSGALG00000002504	TROVE2	99	54.221	Gallus_gallus
ENSDARG00000089225	trove2	94	56.410	ENSGAFG00000011806	trove2	94	56.410	Gambusia_affinis
ENSDARG00000089225	trove2	99	55.347	ENSGAGG00000017742	TROVE2	99	55.347	Gopherus_agassizii
ENSDARG00000089225	trove2	99	54.409	ENSGGOG00000034815	TROVE2	99	54.409	Gorilla_gorilla
ENSDARG00000089225	trove2	98	51.595	ENSHBUG00000014208	trove2	99	51.595	Haplochromis_burtoni
ENSDARG00000089225	trove2	99	53.283	ENSHGLG00000003152	TROVE2	99	53.283	Heterocephalus_glaber_female
ENSDARG00000089225	trove2	99	53.283	ENSHGLG00100010586	TROVE2	99	53.283	Heterocephalus_glaber_male
ENSDARG00000089225	trove2	96	53.269	ENSHCOG00000004153	trove2	95	53.269	Hippocampus_comes
ENSDARG00000089225	trove2	100	57.037	ENSIPUG00000011780	trove2	100	57.037	Ictalurus_punctatus
ENSDARG00000089225	trove2	99	50.281	ENSSTOG00000012307	TROVE2	99	50.281	Ictidomys_tridecemlineatus
ENSDARG00000089225	trove2	99	53.846	ENSJJAG00000019489	Trove2	99	53.846	Jaculus_jaculus
ENSDARG00000089225	trove2	94	55.929	ENSKMAG00000004951	trove2	94	55.929	Kryptolebias_marmoratus
ENSDARG00000089225	trove2	96	58.171	ENSLBEG00000009672	trove2	95	58.171	Labrus_bergylta
ENSDARG00000089225	trove2	97	53.802	ENSLACG00000007822	TROVE2	97	53.802	Latimeria_chalumnae
ENSDARG00000089225	trove2	99	57.993	ENSLOCG00000007384	trove2	99	57.993	Lepisosteus_oculatus
ENSDARG00000089225	trove2	99	54.221	ENSLAFG00000014808	TROVE2	99	54.221	Loxodonta_africana
ENSDARG00000089225	trove2	99	54.409	ENSMFAG00000016020	TROVE2	99	54.409	Macaca_fascicularis
ENSDARG00000089225	trove2	97	54.302	ENSMMUG00000022643	TROVE2	98	54.302	Macaca_mulatta
ENSDARG00000089225	trove2	99	54.409	ENSMNEG00000039348	TROVE2	99	54.409	Macaca_nemestrina
ENSDARG00000089225	trove2	99	54.409	ENSMLEG00000040042	TROVE2	99	54.409	Mandrillus_leucophaeus
ENSDARG00000089225	trove2	96	56.420	ENSMAMG00000002004	trove2	100	54.797	Mastacembelus_armatus
ENSDARG00000089225	trove2	100	49.822	ENSMZEG00005008107	trove2	100	49.822	Maylandia_zebra
ENSDARG00000089225	trove2	99	53.745	ENSMGAG00000005429	TROVE2	99	53.745	Meleagris_gallopavo
ENSDARG00000089225	trove2	99	53.846	ENSMAUG00000008125	Trove2	99	53.846	Mesocricetus_auratus
ENSDARG00000089225	trove2	99	54.034	ENSMICG00000011506	TROVE2	99	54.034	Microcebus_murinus
ENSDARG00000089225	trove2	98	53.321	ENSMOCG00000021175	Trove2	98	53.321	Microtus_ochrogaster
ENSDARG00000089225	trove2	94	58.071	ENSMMOG00000017049	trove2	97	57.874	Mola_mola
ENSDARG00000089225	trove2	99	53.471	ENSMODG00000012203	TROVE2	99	53.471	Monodelphis_domestica
ENSDARG00000089225	trove2	94	57.480	ENSMALG00000007367	trove2	94	57.480	Monopterus_albus
ENSDARG00000089225	trove2	99	53.659	MGP_CAROLIEiJ_G0014676	Trove2	99	53.659	Mus_caroli
ENSDARG00000089225	trove2	99	53.283	ENSMUSG00000018199	Trove2	99	53.283	Mus_musculus
ENSDARG00000089225	trove2	94	54.438	MGP_PahariEiJ_G0027912	Trove2	86	54.438	Mus_pahari
ENSDARG00000089225	trove2	97	53.714	MGP_SPRETEiJ_G0015483	Trove2	97	53.714	Mus_spretus
ENSDARG00000089225	trove2	99	54.221	ENSMPUG00000004631	TROVE2	99	54.221	Mustela_putorius_furo
ENSDARG00000089225	trove2	99	54.717	ENSMLUG00000001442	TROVE2	99	54.717	Myotis_lucifugus
ENSDARG00000089225	trove2	94	54.832	ENSNGAG00000015898	Trove2	94	54.832	Nannospalax_galili
ENSDARG00000089225	trove2	100	51.743	ENSNBRG00000005311	trove2	100	51.743	Neolamprologus_brichardi
ENSDARG00000089225	trove2	99	54.409	ENSNLEG00000018048	TROVE2	99	54.409	Nomascus_leucogenys
ENSDARG00000089225	trove2	73	55.102	ENSMEUG00000005618	-	75	55.102	Notamacropus_eugenii
ENSDARG00000089225	trove2	74	47.739	ENSOPRG00000017247	TROVE2	99	47.739	Ochotona_princeps
ENSDARG00000089225	trove2	100	52.865	ENSODEG00000010468	TROVE2	100	52.865	Octodon_degus
ENSDARG00000089225	trove2	98	51.103	ENSONIG00000018579	trove2	98	51.103	Oreochromis_niloticus
ENSDARG00000089225	trove2	96	55.166	ENSOANG00000002961	TROVE2	95	55.166	Ornithorhynchus_anatinus
ENSDARG00000089225	trove2	100	52.126	ENSOCUG00000012814	TROVE2	100	52.126	Oryctolagus_cuniculus
ENSDARG00000089225	trove2	96	51.845	ENSORLG00000010951	trove2	96	52.805	Oryzias_latipes
ENSDARG00000089225	trove2	96	51.845	ENSORLG00020009759	trove2	99	50.190	Oryzias_latipes_hni
ENSDARG00000089225	trove2	96	52.427	ENSORLG00015004497	trove2	96	53.385	Oryzias_latipes_hsok
ENSDARG00000089225	trove2	96	52.481	ENSOMEG00000010440	trove2	96	52.481	Oryzias_melastigma
ENSDARG00000089225	trove2	97	53.728	ENSOGAG00000032047	TROVE2	98	53.728	Otolemur_garnettii
ENSDARG00000089225	trove2	99	53.659	ENSOARG00000009462	TROVE2	95	53.659	Ovis_aries
ENSDARG00000089225	trove2	99	54.221	ENSPPAG00000043846	TROVE2	99	54.221	Pan_paniscus
ENSDARG00000089225	trove2	99	54.597	ENSPPRG00000017233	TROVE2	99	54.597	Panthera_pardus
ENSDARG00000089225	trove2	99	54.409	ENSPTIG00000015535	TROVE2	99	54.409	Panthera_tigris_altaica
ENSDARG00000089225	trove2	99	54.409	ENSPTRG00000001794	TROVE2	99	54.409	Pan_troglodytes
ENSDARG00000089225	trove2	99	54.409	ENSPANG00000000341	TROVE2	99	54.409	Papio_anubis
ENSDARG00000089225	trove2	95	57.534	ENSPKIG00000018217	trove2	98	57.534	Paramormyrops_kingsleyae
ENSDARG00000089225	trove2	99	54.120	ENSPSIG00000009877	TROVE2	99	54.120	Pelodiscus_sinensis
ENSDARG00000089225	trove2	94	55.621	ENSPEMG00000001419	Trove2	94	55.621	Peromyscus_maniculatus_bairdii
ENSDARG00000089225	trove2	99	53.283	ENSPCIG00000028632	TROVE2	99	53.283	Phascolarctos_cinereus
ENSDARG00000089225	trove2	94	57.199	ENSPFOG00000006974	trove2	94	57.199	Poecilia_formosa
ENSDARG00000089225	trove2	94	57.199	ENSPLAG00000009027	trove2	94	57.199	Poecilia_latipinna
ENSDARG00000089225	trove2	94	57.002	ENSPMEG00000015081	trove2	93	57.002	Poecilia_mexicana
ENSDARG00000089225	trove2	94	57.002	ENSPREG00000005674	trove2	94	57.002	Poecilia_reticulata
ENSDARG00000089225	trove2	99	54.409	ENSPPYG00000000397	TROVE2	99	54.409	Pongo_abelii
ENSDARG00000089225	trove2	99	53.659	ENSPCAG00000003959	TROVE2	99	53.659	Procavia_capensis
ENSDARG00000089225	trove2	99	54.221	ENSPCOG00000015951	-	99	54.221	Propithecus_coquereli
ENSDARG00000089225	trove2	89	52.174	ENSPVAG00000001182	TROVE2	99	52.174	Pteropus_vampyrus
ENSDARG00000089225	trove2	95	51.229	ENSPNYG00000020148	trove2	93	51.434	Pundamilia_nyererei
ENSDARG00000089225	trove2	96	68.482	ENSPNAG00000024223	trove2	95	68.482	Pygocentrus_nattereri
ENSDARG00000089225	trove2	94	54.438	ENSRNOG00000003434	Trove2	94	54.438	Rattus_norvegicus
ENSDARG00000089225	trove2	99	54.409	ENSRBIG00000030073	TROVE2	99	54.409	Rhinopithecus_bieti
ENSDARG00000089225	trove2	99	54.409	ENSRROG00000034428	TROVE2	99	54.409	Rhinopithecus_roxellana
ENSDARG00000089225	trove2	99	54.221	ENSSBOG00000024070	TROVE2	99	54.221	Saimiri_boliviensis_boliviensis
ENSDARG00000089225	trove2	99	53.471	ENSSHAG00000013205	TROVE2	99	53.471	Sarcophilus_harrisii
ENSDARG00000089225	trove2	96	59.259	ENSSFOG00015011990	trove2	94	59.259	Scleropages_formosus
ENSDARG00000089225	trove2	94	59.136	ENSSMAG00000009058	trove2	94	59.136	Scophthalmus_maximus
ENSDARG00000089225	trove2	94	59.332	ENSSDUG00000009083	trove2	94	59.332	Seriola_dumerili
ENSDARG00000089225	trove2	94	59.369	ENSSLDG00000019857	trove2	93	59.369	Seriola_lalandi_dorsalis
ENSDARG00000089225	trove2	100	53.789	ENSSARG00000009347	TROVE2	100	53.789	Sorex_araneus
ENSDARG00000089225	trove2	99	54.221	ENSSPUG00000014304	TROVE2	99	54.221	Sphenodon_punctatus
ENSDARG00000089225	trove2	94	60.158	ENSSPAG00000003171	trove2	94	60.158	Stegastes_partitus
ENSDARG00000089225	trove2	94	54.832	ENSSSCG00000032055	TROVE2	94	54.832	Sus_scrofa
ENSDARG00000089225	trove2	96	56.335	ENSTGUG00000004126	TROVE2	99	56.335	Taeniopygia_guttata
ENSDARG00000089225	trove2	94	56.299	ENSTRUG00000009656	trove2	94	56.299	Takifugu_rubripes
ENSDARG00000089225	trove2	96	55.642	ENSTNIG00000007802	trove2	95	55.642	Tetraodon_nigroviridis
ENSDARG00000089225	trove2	74	52.881	ENSTBEG00000006806	TROVE2	82	52.881	Tupaia_belangeri
ENSDARG00000089225	trove2	99	54.409	ENSTTRG00000009291	TROVE2	99	54.409	Tursiops_truncatus
ENSDARG00000089225	trove2	99	54.221	ENSUAMG00000013365	TROVE2	99	54.221	Ursus_americanus
ENSDARG00000089225	trove2	99	54.597	ENSUMAG00000020464	TROVE2	99	54.597	Ursus_maritimus
ENSDARG00000089225	trove2	79	57.067	ENSVPAG00000010303	TROVE2	79	57.067	Vicugna_pacos
ENSDARG00000089225	trove2	94	53.937	ENSVVUG00000013405	TROVE2	71	53.937	Vulpes_vulpes
ENSDARG00000089225	trove2	94	55.227	ENSXETG00000017224	trove2	94	55.227	Xenopus_tropicalis
ENSDARG00000089225	trove2	94	52.140	ENSXCOG00000007527	trove2	93	51.677	Xiphophorus_couchianus
ENSDARG00000089225	trove2	94	55.819	ENSXMAG00000004825	trove2	94	55.819	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	21873635.	IBA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0008150	biological_process	-	ND	Process
GO:1990904	ribonucleoprotein complex	21873635.	IBA	Component