EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Gene Ontology

Description

Ensembl ID: ENSDARG00000089230 (Gene tree)
Gene ID: 562114
Gene Symbol: si:ch211-253b8.2
Alias: fd44f01|wu:fd44f01
Full Name: si:ch211-253b8.2
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 8196 bases
Position: chr11:6977268-6985463
Accession: ZDB-GENE-030131-4633
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000107486	zf-C2H2	PF00096.26	2.7e-12	1	2
ENSDARP00000107486	zf-C2H2	PF00096.26	2.7e-12	2	2
ENSDARP00000107486	zf-met	PF12874.7	1.6e-05	1	1
ENSDARP00000107486	zf-C2H2_jaz	PF12171.8	4.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000129955	-	4713	-	ENSDARP00000107486	386 (aa)	-	E7F398

Gene Model

Click here to download ENSDARG00000089230's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000089230's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000089230	si:ch211-253b8.2	96	39.535	ENSDARG00000070048	zgc:173548	95	39.535

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0006974	cellular response to DNA damage stimulus	21873635.	IBA	Process
GO:0046872	metal ion binding	-	IEA	Function