EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000089637 (Gene tree)
Gene ID: 100005387
Gene Symbol: rnaseh2c
Alias: fc08g11|im:5617510|si:dkey-147f20.5|wu:fc08g11
Full Name: ribonuclease H2%2C subunit C
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 5237 bases
Position: chr14:35409323-35414559
Accession: ZDB-GENE-030131-2469
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000123155	RNase_H2_suC	PF08615.11	5.4e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000135512	-	840	-	-	- (aa)	-	-
ENSDART00000145033	-	1608	-	ENSDARP00000123155	137 (aa)	-	E9QD20
ENSDART00000143188	-	548	-	ENSDARP00000142338	143 (aa)	-	A0A140LGF9

Gene Model

Click here to download ENSDARG00000089637's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03030	DNA replication	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000089637's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000089637	rnaseh2c	100	67.883	ENSAPOG00000012901	rnaseh2c	100	67.883	Acanthochromis_polyacanthus
ENSDARG00000089637	rnaseh2c	99	66.176	ENSACIG00000022433	rnaseh2c	100	66.176	Amphilophus_citrinellus
ENSDARG00000089637	rnaseh2c	99	67.647	ENSAOCG00000016855	rnaseh2c	100	67.647	Amphiprion_ocellaris
ENSDARG00000089637	rnaseh2c	99	68.382	ENSAPEG00000009850	rnaseh2c	100	68.382	Amphiprion_percula
ENSDARG00000089637	rnaseh2c	99	69.118	ENSATEG00000014395	rnaseh2c	100	69.118	Anabas_testudineus
ENSDARG00000089637	rnaseh2c	99	63.971	ENSACLG00000016950	rnaseh2c	100	63.971	Astatotilapia_calliptera
ENSDARG00000089637	rnaseh2c	99	74.815	ENSAMXG00000001210	rnaseh2c	100	74.815	Astyanax_mexicanus
ENSDARG00000089637	rnaseh2c	99	48.148	ENSCPBG00000023408	-	97	48.148	Chrysemys_picta_bellii
ENSDARG00000089637	rnaseh2c	100	64.964	ENSCSEG00000005808	rnaseh2c	99	64.964	Cynoglossus_semilaevis
ENSDARG00000089637	rnaseh2c	99	66.176	ENSCVAG00000006337	rnaseh2c	100	66.176	Cyprinodon_variegatus
ENSDARG00000089637	rnaseh2c	77	45.370	ENSEBUG00000014939	rnaseh2c	69	45.370	Eptatretus_burgeri
ENSDARG00000089637	rnaseh2c	100	70.073	ENSELUG00000007345	rnaseh2c	100	70.073	Esox_lucius
ENSDARG00000089637	rnaseh2c	95	66.154	ENSFHEG00000002419	rnaseh2c	95	66.154	Fundulus_heteroclitus
ENSDARG00000089637	rnaseh2c	65	56.180	ENSGMOG00000008727	rnaseh2c	99	56.180	Gadus_morhua
ENSDARG00000089637	rnaseh2c	99	65.441	ENSGAFG00000016755	rnaseh2c	83	65.441	Gambusia_affinis
ENSDARG00000089637	rnaseh2c	98	48.507	ENSGAGG00000008193	-	96	48.507	Gopherus_agassizii
ENSDARG00000089637	rnaseh2c	99	63.971	ENSHBUG00000012806	rnaseh2c	100	63.971	Haplochromis_burtoni
ENSDARG00000089637	rnaseh2c	99	64.706	ENSHCOG00000007177	rnaseh2c	100	64.706	Hippocampus_comes
ENSDARG00000089637	rnaseh2c	99	72.794	ENSIPUG00000018044	rnaseh2c	100	72.794	Ictalurus_punctatus
ENSDARG00000089637	rnaseh2c	99	63.235	ENSKMAG00000004184	rnaseh2c	100	63.235	Kryptolebias_marmoratus
ENSDARG00000089637	rnaseh2c	99	64.234	ENSLBEG00000005742	rnaseh2c	100	64.234	Labrus_bergylta
ENSDARG00000089637	rnaseh2c	94	56.589	ENSLACG00000010120	-	94	55.639	Latimeria_chalumnae
ENSDARG00000089637	rnaseh2c	99	68.382	ENSMAMG00000021610	rnaseh2c	100	68.382	Mastacembelus_armatus
ENSDARG00000089637	rnaseh2c	99	64.706	ENSMZEG00005004796	rnaseh2c	100	64.706	Maylandia_zebra
ENSDARG00000089637	rnaseh2c	99	63.235	ENSMMOG00000002869	rnaseh2c	96	67.480	Mola_mola
ENSDARG00000089637	rnaseh2c	99	67.883	ENSMALG00000012198	rnaseh2c	100	67.883	Monopterus_albus
ENSDARG00000089637	rnaseh2c	99	63.971	ENSNBRG00000001462	rnaseh2c	100	63.971	Neolamprologus_brichardi
ENSDARG00000089637	rnaseh2c	99	63.235	ENSONIG00000005338	rnaseh2c	99	63.235	Oreochromis_niloticus
ENSDARG00000089637	rnaseh2c	99	61.765	ENSORLG00000023473	rnaseh2c	100	61.765	Oryzias_latipes
ENSDARG00000089637	rnaseh2c	99	61.765	ENSORLG00020019053	rnaseh2c	91	61.765	Oryzias_latipes_hni
ENSDARG00000089637	rnaseh2c	99	62.500	ENSORLG00015017067	rnaseh2c	91	62.500	Oryzias_latipes_hsok
ENSDARG00000089637	rnaseh2c	99	61.765	ENSOMEG00000018607	rnaseh2c	100	61.765	Oryzias_melastigma
ENSDARG00000089637	rnaseh2c	99	61.029	ENSPKIG00000019331	rnaseh2c	100	61.029	Paramormyrops_kingsleyae
ENSDARG00000089637	rnaseh2c	99	64.706	ENSPFOG00000009415	rnaseh2c	100	64.706	Poecilia_formosa
ENSDARG00000089637	rnaseh2c	99	65.441	ENSPLAG00000023330	rnaseh2c	100	65.441	Poecilia_latipinna
ENSDARG00000089637	rnaseh2c	99	64.706	ENSPMEG00000003696	rnaseh2c	100	64.706	Poecilia_mexicana
ENSDARG00000089637	rnaseh2c	99	60.544	ENSPREG00000015384	rnaseh2c	73	60.544	Poecilia_reticulata
ENSDARG00000089637	rnaseh2c	99	63.971	ENSPNYG00000014766	rnaseh2c	100	63.971	Pundamilia_nyererei
ENSDARG00000089637	rnaseh2c	99	77.037	ENSPNAG00000019111	rnaseh2c	99	77.037	Pygocentrus_nattereri
ENSDARG00000089637	rnaseh2c	99	71.852	ENSSFOG00015005760	rnaseh2c	99	71.852	Scleropages_formosus
ENSDARG00000089637	rnaseh2c	99	67.647	ENSSMAG00000017738	rnaseh2c	100	67.647	Scophthalmus_maximus
ENSDARG00000089637	rnaseh2c	99	66.912	ENSSDUG00000017285	rnaseh2c	100	66.912	Seriola_dumerili
ENSDARG00000089637	rnaseh2c	99	68.382	ENSSLDG00000016030	rnaseh2c	100	68.382	Seriola_lalandi_dorsalis
ENSDARG00000089637	rnaseh2c	88	50.000	ENSSPUG00000000842	-	82	50.000	Sphenodon_punctatus
ENSDARG00000089637	rnaseh2c	99	66.176	ENSSPAG00000007536	rnaseh2c	100	66.176	Stegastes_partitus
ENSDARG00000089637	rnaseh2c	99	62.500	ENSTRUG00000021845	rnaseh2c	100	62.500	Takifugu_rubripes
ENSDARG00000089637	rnaseh2c	99	64.706	ENSTNIG00000000431	rnaseh2c	100	64.706	Tetraodon_nigroviridis
ENSDARG00000089637	rnaseh2c	97	51.880	ENSXETG00000032466	-	96	51.880	Xenopus_tropicalis
ENSDARG00000089637	rnaseh2c	95	68.462	ENSXCOG00000001611	rnaseh2c	96	68.462	Xiphophorus_couchianus
ENSDARG00000089637	rnaseh2c	99	66.912	ENSXMAG00000003147	rnaseh2c	83	66.912	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0006401	RNA catabolic process	-	IEA	Process
GO:0032299	ribonuclease H2 complex	-	IEA	Component