EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000089836 (Gene tree)
Gene ID: 793878
Gene Symbol: MRPS12
Alias: RPMS12|RPS12|RPSM12
Full Name: si:dkey-17e16.10
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 4145 bases
Position: chr21:25561284-25565428
Accession: ZDB-GENE-091204-48
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000116443	Ribosom_S12_S23	PF00164.25	8.5e-24	1	1
ENSDARP00000152506	Ribosom_S12_S23	PF00164.25	8.5e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000144917	MRPS12-202	770	XM_009295434	ENSDARP00000116443	143 (aa)	XP_009293709	E7F8G8
ENSDART00000180102	MRPS12-201	923	-	ENSDARP00000152506	143 (aa)	-	E7F8G8

Gene Model

Click here to download ENSDARG00000089836's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000089836's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000089836	MRPS12	52	36.585	ENSDARG00000021838	rps23	57	36.585

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000089836	MRPS12	83	69.748	ENSG00000128626	MRPS12	83	69.748	Homo_sapiens
ENSDARG00000089836	MRPS12	100	79.720	ENSAPOG00000005047	si:dkey-17e16.10	100	79.720	Acanthochromis_polyacanthus
ENSDARG00000089836	MRPS12	99	63.194	ENSAMEG00000008722	MRPS12	100	63.265	Ailuropoda_melanoleuca
ENSDARG00000089836	MRPS12	100	79.720	ENSACIG00000016095	si:dkey-17e16.10	100	79.720	Amphilophus_citrinellus
ENSDARG00000089836	MRPS12	100	76.923	ENSAOCG00000018530	si:dkey-17e16.10	100	76.923	Amphiprion_ocellaris
ENSDARG00000089836	MRPS12	100	76.224	ENSAPEG00000019785	si:dkey-17e16.10	100	76.224	Amphiprion_percula
ENSDARG00000089836	MRPS12	100	79.720	ENSATEG00000018924	si:dkey-17e16.10	100	79.720	Anabas_testudineus
ENSDARG00000089836	MRPS12	76	70.642	ENSAPLG00000014350	-	73	70.642	Anas_platyrhynchos
ENSDARG00000089836	MRPS12	77	76.364	ENSAPLG00000011925	-	79	76.364	Anas_platyrhynchos
ENSDARG00000089836	MRPS12	77	79.646	ENSACAG00000003829	MRPS12	76	79.646	Anolis_carolinensis
ENSDARG00000089836	MRPS12	99	63.194	ENSANAG00000033654	MRPS12	100	63.194	Aotus_nancymaae
ENSDARG00000089836	MRPS12	100	80.420	ENSACLG00000013979	si:dkey-17e16.10	95	80.420	Astatotilapia_calliptera
ENSDARG00000089836	MRPS12	100	76.027	ENSAMXG00000025945	si:dkey-17e16.10	100	76.027	Astyanax_mexicanus
ENSDARG00000089836	MRPS12	99	63.380	ENSBTAG00000001782	MRPS12	100	63.380	Bos_taurus
ENSDARG00000089836	MRPS12	94	46.207	WBGene00011391	mrps-12	92	46.207	Caenorhabditis_elegans
ENSDARG00000089836	MRPS12	84	70.000	ENSCJAG00000043176	MRPS12	83	70.000	Callithrix_jacchus
ENSDARG00000089836	MRPS12	99	63.636	ENSCAFG00000005623	MRPS12	100	63.636	Canis_familiaris
ENSDARG00000089836	MRPS12	99	63.636	ENSCAFG00020016784	MRPS12	100	63.636	Canis_lupus_dingo
ENSDARG00000089836	MRPS12	99	63.380	ENSCHIG00000013852	MRPS12	100	63.380	Capra_hircus
ENSDARG00000089836	MRPS12	99	65.517	ENSTSYG00000009568	MRPS12	100	65.517	Carlito_syrichta
ENSDARG00000089836	MRPS12	84	70.833	ENSCAPG00000009543	MRPS12	85	70.833	Cavia_aperea
ENSDARG00000089836	MRPS12	84	70.833	ENSCPOG00000035217	MRPS12	83	70.833	Cavia_porcellus
ENSDARG00000089836	MRPS12	83	69.748	ENSCCAG00000035388	MRPS12	83	69.748	Cebus_capucinus
ENSDARG00000089836	MRPS12	84	70.000	ENSCATG00000038438	MRPS12	83	70.000	Cercocebus_atys
ENSDARG00000089836	MRPS12	92	67.164	ENSCLAG00000013286	MRPS12	96	67.164	Chinchilla_lanigera
ENSDARG00000089836	MRPS12	84	70.833	ENSCSAG00000003929	MRPS12	83	70.833	Chlorocebus_sabaeus
ENSDARG00000089836	MRPS12	60	81.395	ENSCHOG00000008451	MRPS12	62	81.395	Choloepus_hoffmanni
ENSDARG00000089836	MRPS12	80	78.261	ENSCPBG00000018941	MRPS12	74	78.261	Chrysemys_picta_bellii
ENSDARG00000089836	MRPS12	59	68.235	ENSCING00000014236	-	66	52.344	Ciona_intestinalis
ENSDARG00000089836	MRPS12	84	70.000	ENSCANG00000003652	MRPS12	83	70.000	Colobus_angolensis_palliatus
ENSDARG00000089836	MRPS12	84	69.167	ENSCGRG00001018968	Mrps12	83	69.167	Cricetulus_griseus_chok1gshd
ENSDARG00000089836	MRPS12	84	69.167	ENSCGRG00000007113	Mrps12	83	69.167	Cricetulus_griseus_crigri
ENSDARG00000089836	MRPS12	100	77.622	ENSCSEG00000001174	si:dkey-17e16.10	100	77.622	Cynoglossus_semilaevis
ENSDARG00000089836	MRPS12	100	77.622	ENSCVAG00000003253	si:dkey-17e16.10	100	77.622	Cyprinodon_variegatus
ENSDARG00000089836	MRPS12	87	72.000	ENSDNOG00000003918	MRPS12	90	72.000	Dasypus_novemcinctus
ENSDARG00000089836	MRPS12	94	66.176	ENSDORG00000001544	Mrps12	98	66.176	Dipodomys_ordii
ENSDARG00000089836	MRPS12	98	56.643	FBgn0003714	tko	95	56.643	Drosophila_melanogaster
ENSDARG00000089836	MRPS12	92	70.896	ENSETEG00000017985	MRPS12	96	70.896	Echinops_telfairi
ENSDARG00000089836	MRPS12	78	80.357	ENSEBUG00000003529	si:dkey-17e16.10	64	80.357	Eptatretus_burgeri
ENSDARG00000089836	MRPS12	84	73.333	ENSEASG00005019736	MRPS12	83	73.333	Equus_asinus_asinus
ENSDARG00000089836	MRPS12	84	73.333	ENSECAG00000013794	MRPS12	83	73.333	Equus_caballus
ENSDARG00000089836	MRPS12	67	54.167	ENSEEUG00000013868	MRPS12	100	54.167	Erinaceus_europaeus
ENSDARG00000089836	MRPS12	99	83.099	ENSELUG00000014973	si:dkey-17e16.10	99	83.099	Esox_lucius
ENSDARG00000089836	MRPS12	79	72.566	ENSFCAG00000014573	MRPS12	81	72.566	Felis_catus
ENSDARG00000089836	MRPS12	76	71.560	ENSFALG00000015276	MRPS12	95	71.560	Ficedula_albicollis
ENSDARG00000089836	MRPS12	98	65.000	ENSFDAG00000008482	MRPS12	99	65.000	Fukomys_damarensis
ENSDARG00000089836	MRPS12	100	78.322	ENSFHEG00000004575	si:dkey-17e16.10	100	78.322	Fundulus_heteroclitus
ENSDARG00000089836	MRPS12	78	88.288	ENSGMOG00000020611	si:dkey-17e16.10	100	88.288	Gadus_morhua
ENSDARG00000089836	MRPS12	96	67.153	ENSGALG00000038667	MRPS12	90	70.968	Gallus_gallus
ENSDARG00000089836	MRPS12	98	79.286	ENSGAFG00000007521	si:dkey-17e16.10	99	79.286	Gambusia_affinis
ENSDARG00000089836	MRPS12	99	73.050	ENSGACG00000003011	si:dkey-17e16.10	100	88.288	Gasterosteus_aculeatus
ENSDARG00000089836	MRPS12	80	79.825	ENSGAGG00000009748	MRPS12	73	79.825	Gopherus_agassizii
ENSDARG00000089836	MRPS12	83	69.748	ENSGGOG00000002500	MRPS12	83	69.748	Gorilla_gorilla
ENSDARG00000089836	MRPS12	100	79.720	ENSHBUG00000014480	si:dkey-17e16.10	100	79.720	Haplochromis_burtoni
ENSDARG00000089836	MRPS12	100	60.839	ENSHGLG00000014942	MRPS12	100	60.839	Heterocephalus_glaber_female
ENSDARG00000089836	MRPS12	100	60.839	ENSHGLG00100017710	MRPS12	100	60.839	Heterocephalus_glaber_male
ENSDARG00000089836	MRPS12	100	73.611	ENSHCOG00000010444	si:dkey-17e16.10	96	73.611	Hippocampus_comes
ENSDARG00000089836	MRPS12	100	84.615	ENSIPUG00000024651	MRPS12	100	84.615	Ictalurus_punctatus
ENSDARG00000089836	MRPS12	90	69.531	ENSSTOG00000009006	MRPS12	92	69.531	Ictidomys_tridecemlineatus
ENSDARG00000089836	MRPS12	94	65.441	ENSJJAG00000017837	Mrps12	98	65.441	Jaculus_jaculus
ENSDARG00000089836	MRPS12	100	76.224	ENSKMAG00000007949	si:dkey-17e16.10	91	76.224	Kryptolebias_marmoratus
ENSDARG00000089836	MRPS12	84	85.000	ENSLBEG00000001112	si:dkey-17e16.10	86	85.000	Labrus_bergylta
ENSDARG00000089836	MRPS12	79	82.301	ENSLACG00000018393	MRPS12	71	82.301	Latimeria_chalumnae
ENSDARG00000089836	MRPS12	100	69.388	ENSLOCG00000000535	si:dkey-17e16.10	100	69.388	Lepisosteus_oculatus
ENSDARG00000089836	MRPS12	92	67.910	ENSLAFG00000022140	MRPS12	96	67.910	Loxodonta_africana
ENSDARG00000089836	MRPS12	84	70.833	ENSMFAG00000044563	MRPS12	83	70.833	Macaca_fascicularis
ENSDARG00000089836	MRPS12	84	70.000	ENSMNEG00000040379	MRPS12	83	70.000	Macaca_nemestrina
ENSDARG00000089836	MRPS12	84	70.000	ENSMLEG00000036963	MRPS12	83	70.000	Mandrillus_leucophaeus
ENSDARG00000089836	MRPS12	98	76.429	ENSMAMG00000017962	si:dkey-17e16.10	100	76.429	Mastacembelus_armatus
ENSDARG00000089836	MRPS12	100	79.720	ENSMZEG00005017336	si:dkey-17e16.10	100	79.720	Maylandia_zebra
ENSDARG00000089836	MRPS12	85	71.311	ENSMGAG00000005414	MRPS12	85	71.311	Meleagris_gallopavo
ENSDARG00000089836	MRPS12	74	56.604	ENSMAUG00000019146	Mrps12	100	56.604	Mesocricetus_auratus
ENSDARG00000089836	MRPS12	99	65.248	ENSMICG00000045111	MRPS12	97	65.248	Microcebus_murinus
ENSDARG00000089836	MRPS12	99	63.121	ENSMOCG00000012666	Mrps12	100	63.121	Microtus_ochrogaster
ENSDARG00000089836	MRPS12	100	72.028	ENSMMOG00000010803	si:dkey-17e16.10	95	72.028	Mola_mola
ENSDARG00000089836	MRPS12	96	66.423	ENSMODG00000013431	MRPS12	92	66.423	Monodelphis_domestica
ENSDARG00000089836	MRPS12	100	79.720	ENSMALG00000004190	si:dkey-17e16.10	100	79.720	Monopterus_albus
ENSDARG00000089836	MRPS12	94	66.176	MGP_CAROLIEiJ_G0029457	Mrps12	98	66.176	Mus_caroli
ENSDARG00000089836	MRPS12	94	66.176	ENSMUSG00000045948	Mrps12	98	66.176	Mus_musculus
ENSDARG00000089836	MRPS12	92	64.179	MGP_PahariEiJ_G0012691	Mrps12	94	64.179	Mus_pahari
ENSDARG00000089836	MRPS12	94	66.176	MGP_SPRETEiJ_G0030553	Mrps12	98	66.176	Mus_spretus
ENSDARG00000089836	MRPS12	93	67.910	ENSMPUG00000017750	MRPS12	100	67.883	Mustela_putorius_furo
ENSDARG00000089836	MRPS12	99	64.085	ENSMLUG00000006076	MRPS12	100	64.085	Myotis_lucifugus
ENSDARG00000089836	MRPS12	84	72.500	ENSNGAG00000022099	Mrps12	99	66.197	Nannospalax_galili
ENSDARG00000089836	MRPS12	100	80.420	ENSNBRG00000007244	si:dkey-17e16.10	100	80.420	Neolamprologus_brichardi
ENSDARG00000089836	MRPS12	78	71.171	ENSMEUG00000005688	MRPS12	99	71.171	Notamacropus_eugenii
ENSDARG00000089836	MRPS12	84	71.667	ENSODEG00000016161	MRPS12	88	71.667	Octodon_degus
ENSDARG00000089836	MRPS12	100	80.420	ENSONIG00000002022	si:dkey-17e16.10	100	80.420	Oreochromis_niloticus
ENSDARG00000089836	MRPS12	99	64.539	ENSOCUG00000000689	MRPS12	100	64.539	Oryctolagus_cuniculus
ENSDARG00000089836	MRPS12	100	76.923	ENSORLG00000007040	si:dkey-17e16.10	100	76.923	Oryzias_latipes
ENSDARG00000089836	MRPS12	100	76.923	ENSORLG00020011268	MRPS12	100	76.923	Oryzias_latipes_hni
ENSDARG00000089836	MRPS12	100	76.923	ENSORLG00015009378	MRPS12	100	76.923	Oryzias_latipes_hsok
ENSDARG00000089836	MRPS12	100	77.622	ENSOMEG00000001427	si:dkey-17e16.10	100	77.622	Oryzias_melastigma
ENSDARG00000089836	MRPS12	87	70.161	ENSOGAG00000008295	-	86	70.161	Otolemur_garnettii
ENSDARG00000089836	MRPS12	99	58.333	ENSOGAG00000025634	-	100	58.333	Otolemur_garnettii
ENSDARG00000089836	MRPS12	99	63.380	ENSOARG00000005927	MRPS12	100	63.380	Ovis_aries
ENSDARG00000089836	MRPS12	83	69.748	ENSPPAG00000041637	MRPS12	83	69.748	Pan_paniscus
ENSDARG00000089836	MRPS12	79	72.566	ENSPPRG00000011742	MRPS12	81	72.566	Panthera_pardus
ENSDARG00000089836	MRPS12	62	78.409	ENSPTIG00000008427	MRPS12	72	78.409	Panthera_tigris_altaica
ENSDARG00000089836	MRPS12	83	69.748	ENSPTRG00000010948	MRPS12	83	69.748	Pan_troglodytes
ENSDARG00000089836	MRPS12	99	62.238	ENSPANG00000021673	MRPS12	100	62.238	Papio_anubis
ENSDARG00000089836	MRPS12	100	79.021	ENSPKIG00000006716	si:dkey-17e16.10	100	79.021	Paramormyrops_kingsleyae
ENSDARG00000089836	MRPS12	80	80.000	ENSPSIG00000014383	MRPS12	75	80.000	Pelodiscus_sinensis
ENSDARG00000089836	MRPS12	100	75.694	ENSPMGG00000009631	si:dkey-17e16.10	100	75.694	Periophthalmus_magnuspinnatus
ENSDARG00000089836	MRPS12	99	62.676	ENSPEMG00000016700	Mrps12	100	62.676	Peromyscus_maniculatus_bairdii
ENSDARG00000089836	MRPS12	85	66.929	ENSPMAG00000008051	si:dkey-17e16.10	81	66.929	Petromyzon_marinus
ENSDARG00000089836	MRPS12	77	74.545	ENSPCIG00000010531	-	78	74.545	Phascolarctos_cinereus
ENSDARG00000089836	MRPS12	100	76.923	ENSPFOG00000018863	si:dkey-17e16.10	100	76.923	Poecilia_formosa
ENSDARG00000089836	MRPS12	100	76.923	ENSPLAG00000008933	si:dkey-17e16.10	100	76.923	Poecilia_latipinna
ENSDARG00000089836	MRPS12	100	76.224	ENSPMEG00000005155	si:dkey-17e16.10	95	76.224	Poecilia_mexicana
ENSDARG00000089836	MRPS12	98	78.571	ENSPREG00000014123	si:dkey-17e16.10	95	78.571	Poecilia_reticulata
ENSDARG00000089836	MRPS12	83	69.748	ENSPPYG00000009950	MRPS12	83	69.748	Pongo_abelii
ENSDARG00000089836	MRPS12	92	67.910	ENSPCAG00000010853	MRPS12	97	67.910	Procavia_capensis
ENSDARG00000089836	MRPS12	99	64.539	ENSPCOG00000020370	MRPS12	97	64.539	Propithecus_coquereli
ENSDARG00000089836	MRPS12	99	63.830	ENSPVAG00000011605	MRPS12	97	63.830	Pteropus_vampyrus
ENSDARG00000089836	MRPS12	100	80.420	ENSPNYG00000015506	si:dkey-17e16.10	95	80.420	Pundamilia_nyererei
ENSDARG00000089836	MRPS12	92	74.436	ENSPNAG00000016315	si:dkey-17e16.10	89	74.436	Pygocentrus_nattereri
ENSDARG00000089836	MRPS12	94	66.912	ENSRNOG00000019949	Mrps12	98	66.912	Rattus_norvegicus
ENSDARG00000089836	MRPS12	84	70.000	ENSRBIG00000029741	MRPS12	83	70.000	Rhinopithecus_bieti
ENSDARG00000089836	MRPS12	93	63.309	ENSRROG00000030787	MRPS12	100	63.309	Rhinopithecus_roxellana
ENSDARG00000089836	MRPS12	84	70.833	ENSSBOG00000025707	MRPS12	83	70.833	Saimiri_boliviensis_boliviensis
ENSDARG00000089836	MRPS12	100	77.622	ENSSFOG00015018102	mrps12	100	77.622	Scleropages_formosus
ENSDARG00000089836	MRPS12	100	77.622	ENSSMAG00000004249	si:dkey-17e16.10	100	77.622	Scophthalmus_maximus
ENSDARG00000089836	MRPS12	100	77.622	ENSSDUG00000020424	si:dkey-17e16.10	99	77.622	Seriola_dumerili
ENSDARG00000089836	MRPS12	100	77.622	ENSSLDG00000016320	si:dkey-17e16.10	99	77.622	Seriola_lalandi_dorsalis
ENSDARG00000089836	MRPS12	99	63.699	ENSSARG00000006985	MRPS12	100	63.699	Sorex_araneus
ENSDARG00000089836	MRPS12	99	63.399	ENSSPUG00000004675	MRPS12	99	63.399	Sphenodon_punctatus
ENSDARG00000089836	MRPS12	100	75.524	ENSSPAG00000012951	si:dkey-17e16.10	100	75.524	Stegastes_partitus
ENSDARG00000089836	MRPS12	99	64.789	ENSSSCG00000031860	MRPS12	97	70.732	Sus_scrofa
ENSDARG00000089836	MRPS12	77	72.727	ENSTGUG00000016491	MRPS12	100	72.727	Taeniopygia_guttata
ENSDARG00000089836	MRPS12	100	74.825	ENSTRUG00000017342	si:dkey-17e16.10	98	74.825	Takifugu_rubripes
ENSDARG00000089836	MRPS12	90	80.469	ENSTNIG00000004898	si:dkey-17e16.10	93	80.469	Tetraodon_nigroviridis
ENSDARG00000089836	MRPS12	84	71.667	ENSTBEG00000001288	MRPS12	83	71.667	Tupaia_belangeri
ENSDARG00000089836	MRPS12	99	63.380	ENSTTRG00000011794	MRPS12	100	63.380	Tursiops_truncatus
ENSDARG00000089836	MRPS12	92	67.164	ENSUAMG00000011626	MRPS12	96	67.164	Ursus_americanus
ENSDARG00000089836	MRPS12	92	67.910	ENSUMAG00000019235	MRPS12	96	67.910	Ursus_maritimus
ENSDARG00000089836	MRPS12	99	62.937	ENSVVUG00000006433	MRPS12	71	62.937	Vulpes_vulpes
ENSDARG00000089836	MRPS12	92	70.370	ENSXETG00000005326	mrps12	91	70.370	Xenopus_tropicalis
ENSDARG00000089836	MRPS12	98	79.286	ENSXCOG00000020766	si:dkey-17e16.10	95	79.286	Xiphophorus_couchianus
ENSDARG00000089836	MRPS12	98	79.286	ENSXMAG00000027119	si:dkey-17e16.10	99	79.286	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003735	structural constituent of ribosome	21873635.	IBA	Function
GO:0003735	structural constituent of ribosome	-	IEA	Function
GO:0005840	ribosome	-	IEA	Component
GO:0006412	translation	21873635.	IBA	Process
GO:0006412	translation	-	IEA	Process
GO:0015935	small ribosomal subunit	-	IEA	Component