EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000089883 (Gene tree)
Gene ID: 100003238
Gene Symbol: si:dkey-210j14.3
Alias: -
Full Name: si:dkey-210j14.3
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 3001 bases
Position: chr3:52641737-52644737
Accession: ZDB-GENE-131121-88
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000104735	zf-C2H2	PF00096.26	1.5e-19	1	3
ENSDARP00000104735	zf-C2H2	PF00096.26	1.5e-19	2	3
ENSDARP00000104735	zf-C2H2	PF00096.26	1.5e-19	3	3
ENSDARP00000104735	zf-met	PF12874.7	1.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000126180	-	1249	XM_001342814	ENSDARP00000104735	350 (aa)	XP_001342850	E7EY17

Gene Model

Click here to download ENSDARG00000089883's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000089883's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000089883	si:dkey-210j14.3	99	40.992	ENSPKIG00000014111	si:dkey-210j14.4	97	40.731	Paramormyrops_kingsleyae
ENSDARG00000089883	si:dkey-210j14.3	59	49.519	ENSXCOG00000010950	si:dkey-210j14.3	56	69.828	Xiphophorus_couchianus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003677	DNA binding	21873635.	IBA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0046872	metal ion binding	-	IEA	Function