EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000089886 (Gene tree)
Gene ID: 570260
Gene Symbol: si:dkey-19e4.5
Alias: fb82g02|wu:fb82g02
Full Name: si:dkey-19e4.5
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 12180 bases
Position: chr6:21861087-21873266
Accession: ZDB-GENE-030131-1852
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000125974	PTH2	PF01981.16	5.7e-35	1	1
ENSDARP00000126273	PTH2	PF01981.16	1.2e-34	1	1
ENSDARP00000126135	PTH2	PF01981.16	5.8e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000151152	-	2295	-	ENSDARP00000126135	167 (aa)	-	I3IT77
ENSDART00000151179	-	2107	-	ENSDARP00000126273	189 (aa)	-	I3ITK3
ENSDART00000151658	-	2319	-	ENSDARP00000125974	175 (aa)	-	E7F4Q9

Gene Model

Click here to download ENSDARG00000089886's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000089886's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000089886	si:dkey-19e4.5	66	46.552	ENSDARG00000077339	ptrh2	65	46.552

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000089886	si:dkey-19e4.5	98	92.398	ENSAPOG00000018297	si:dkey-19e4.5	93	92.398	Acanthochromis_polyacanthus
ENSDARG00000089886	si:dkey-19e4.5	98	91.228	ENSACIG00000001450	si:dkey-19e4.5	97	91.228	Amphilophus_citrinellus
ENSDARG00000089886	si:dkey-19e4.5	100	91.429	ENSAOCG00000000622	si:dkey-19e4.5	100	91.429	Amphiprion_ocellaris
ENSDARG00000089886	si:dkey-19e4.5	100	91.429	ENSAPEG00000017071	si:dkey-19e4.5	100	91.429	Amphiprion_percula
ENSDARG00000089886	si:dkey-19e4.5	98	88.304	ENSATEG00000003450	si:dkey-19e4.5	93	88.304	Anabas_testudineus
ENSDARG00000089886	si:dkey-19e4.5	65	71.930	ENSACAG00000028513	-	99	71.930	Anolis_carolinensis
ENSDARG00000089886	si:dkey-19e4.5	98	90.058	ENSACLG00000026360	si:dkey-19e4.5	95	88.953	Astatotilapia_calliptera
ENSDARG00000089886	si:dkey-19e4.5	98	95.906	ENSAMXG00000016302	si:dkey-19e4.5	93	95.906	Astyanax_mexicanus
ENSDARG00000089886	si:dkey-19e4.5	97	38.947	WBGene00016062	C24G6.8	60	39.267	Caenorhabditis_elegans
ENSDARG00000089886	si:dkey-19e4.5	100	88.068	ENSCVAG00000018623	si:dkey-19e4.5	100	88.636	Cyprinodon_variegatus
ENSDARG00000089886	si:dkey-19e4.5	99	90.230	ENSELUG00000012877	si:dkey-19e4.5	94	90.230	Esox_lucius
ENSDARG00000089886	si:dkey-19e4.5	98	88.304	ENSFHEG00000017879	si:dkey-19e4.5	98	88.304	Fundulus_heteroclitus
ENSDARG00000089886	si:dkey-19e4.5	77	90.299	ENSGMOG00000018615	si:dkey-19e4.5	100	90.299	Gadus_morhua
ENSDARG00000089886	si:dkey-19e4.5	98	90.058	ENSGAFG00000008238	si:dkey-19e4.5	88	90.058	Gambusia_affinis
ENSDARG00000089886	si:dkey-19e4.5	77	90.299	ENSGACG00000011371	si:dkey-19e4.5	100	90.299	Gasterosteus_aculeatus
ENSDARG00000089886	si:dkey-19e4.5	98	90.058	ENSHBUG00000003898	si:dkey-19e4.5	95	88.953	Haplochromis_burtoni
ENSDARG00000089886	si:dkey-19e4.5	98	84.795	ENSHCOG00000011175	si:dkey-19e4.5	92	84.795	Hippocampus_comes
ENSDARG00000089886	si:dkey-19e4.5	99	93.642	ENSIPUG00000023250	si:dkey-19e4.5	97	93.567	Ictalurus_punctatus
ENSDARG00000089886	si:dkey-19e4.5	98	85.380	ENSKMAG00000018142	si:dkey-19e4.5	93	85.380	Kryptolebias_marmoratus
ENSDARG00000089886	si:dkey-19e4.5	99	90.230	ENSLBEG00000028494	si:dkey-19e4.5	99	90.230	Labrus_bergylta
ENSDARG00000089886	si:dkey-19e4.5	98	71.345	ENSLACG00000003702	si:dkey-19e4.5	93	71.345	Latimeria_chalumnae
ENSDARG00000089886	si:dkey-19e4.5	98	92.398	ENSLOCG00000013652	si:dkey-19e4.5	93	92.398	Lepisosteus_oculatus
ENSDARG00000089886	si:dkey-19e4.5	98	91.228	ENSMAMG00000023661	si:dkey-19e4.5	97	91.228	Mastacembelus_armatus
ENSDARG00000089886	si:dkey-19e4.5	100	89.143	ENSMZEG00005006058	si:dkey-19e4.5	100	89.143	Maylandia_zebra
ENSDARG00000089886	si:dkey-19e4.5	98	90.058	ENSMMOG00000009678	si:dkey-19e4.5	94	90.058	Mola_mola
ENSDARG00000089886	si:dkey-19e4.5	100	89.714	ENSMALG00000021083	si:dkey-19e4.5	100	89.714	Monopterus_albus
ENSDARG00000089886	si:dkey-19e4.5	83	71.812	ENSNBRG00000018523	si:dkey-19e4.5	72	71.812	Neolamprologus_brichardi
ENSDARG00000089886	si:dkey-19e4.5	97	84.706	ENSORLG00000010093	si:dkey-19e4.5	92	84.706	Oryzias_latipes
ENSDARG00000089886	si:dkey-19e4.5	97	84.706	ENSORLG00020005940	si:dkey-19e4.5	92	84.706	Oryzias_latipes_hni
ENSDARG00000089886	si:dkey-19e4.5	97	84.706	ENSORLG00015002105	si:dkey-19e4.5	92	84.706	Oryzias_latipes_hsok
ENSDARG00000089886	si:dkey-19e4.5	99	85.632	ENSOMEG00000001615	si:dkey-19e4.5	99	85.632	Oryzias_melastigma
ENSDARG00000089886	si:dkey-19e4.5	98	90.643	ENSPKIG00000018613	-	100	87.079	Paramormyrops_kingsleyae
ENSDARG00000089886	si:dkey-19e4.5	100	79.429	ENSPKIG00000016249	-	98	79.545	Paramormyrops_kingsleyae
ENSDARG00000089886	si:dkey-19e4.5	99	87.356	ENSPFOG00000011934	si:dkey-19e4.5	94	89.080	Poecilia_formosa
ENSDARG00000089886	si:dkey-19e4.5	99	89.017	ENSPLAG00000012878	si:dkey-19e4.5	94	89.017	Poecilia_latipinna
ENSDARG00000089886	si:dkey-19e4.5	99	87.356	ENSPMEG00000015916	si:dkey-19e4.5	94	89.080	Poecilia_mexicana
ENSDARG00000089886	si:dkey-19e4.5	99	89.017	ENSPREG00000021009	si:dkey-19e4.5	94	89.017	Poecilia_reticulata
ENSDARG00000089886	si:dkey-19e4.5	98	90.058	ENSPNYG00000007117	si:dkey-19e4.5	93	90.058	Pundamilia_nyererei
ENSDARG00000089886	si:dkey-19e4.5	98	95.322	ENSPNAG00000009107	si:dkey-19e4.5	97	94.220	Pygocentrus_nattereri
ENSDARG00000089886	si:dkey-19e4.5	98	85.965	ENSSFOG00015015536	-	98	84.091	Scleropages_formosus
ENSDARG00000089886	si:dkey-19e4.5	98	91.228	ENSSFOG00015018940	-	79	91.228	Scleropages_formosus
ENSDARG00000089886	si:dkey-19e4.5	98	91.813	ENSSMAG00000004082	si:dkey-19e4.5	93	91.813	Scophthalmus_maximus
ENSDARG00000089886	si:dkey-19e4.5	98	91.813	ENSSDUG00000008513	si:dkey-19e4.5	97	91.813	Seriola_dumerili
ENSDARG00000089886	si:dkey-19e4.5	98	78.363	ENSSLDG00000017403	si:dkey-19e4.5	98	77.011	Seriola_lalandi_dorsalis
ENSDARG00000089886	si:dkey-19e4.5	73	70.866	ENSSPUG00000009492	-	81	70.866	Sphenodon_punctatus
ENSDARG00000089886	si:dkey-19e4.5	99	91.908	ENSSPAG00000008798	si:dkey-19e4.5	98	91.908	Stegastes_partitus
ENSDARG00000089886	si:dkey-19e4.5	98	86.550	ENSTRUG00000020025	si:dkey-19e4.5	94	86.550	Takifugu_rubripes
ENSDARG00000089886	si:dkey-19e4.5	99	89.595	ENSXCOG00000002547	si:dkey-19e4.5	94	89.595	Xiphophorus_couchianus
ENSDARG00000089886	si:dkey-19e4.5	99	89.595	ENSXMAG00000025389	si:dkey-19e4.5	94	89.595	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0004045	aminoacyl-tRNA hydrolase activity	21873635.	IBA	Function
GO:0004045	aminoacyl-tRNA hydrolase activity	-	IEA	Function
GO:0005829	cytosol	21873635.	IBA	Component