EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Gene Ontology

Description

Ensembl ID: ENSDARG00000090160 (Gene tree)
Gene ID: 100002234
Gene Symbol: zgc:173709
Alias: -
Full Name: zgc:173709
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 131403 bases
Position: chr4:49821234-49952636
Accession: ZDB-GENE-080208-5
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000131578	zf-C2H2	PF00096.26	1.3e-55	1	8
ENSDARP00000131578	zf-C2H2	PF00096.26	1.3e-55	2	8
ENSDARP00000131578	zf-C2H2	PF00096.26	1.3e-55	3	8
ENSDARP00000131578	zf-C2H2	PF00096.26	1.3e-55	4	8
ENSDARP00000131578	zf-C2H2	PF00096.26	1.3e-55	5	8
ENSDARP00000131578	zf-C2H2	PF00096.26	1.3e-55	6	8
ENSDARP00000131578	zf-C2H2	PF00096.26	1.3e-55	7	8
ENSDARP00000131578	zf-C2H2	PF00096.26	1.3e-55	8	8
ENSDARP00000131578	zf-met	PF12874.7	0.00024	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000157941	-	1784	XM_017355673	ENSDARP00000131578	383 (aa)	XP_017211162	A8KBM3
ENSDART00000185921	-	2810	-	ENSDARP00000156631	693 (aa)	-	A0A2R8QT56
ENSDART00000190248	-	2425	XM_021475599	ENSDARP00000146475	759 (aa)	XP_021331274	A0A2R8PZ39
ENSDART00000190750	-	2221	-	ENSDARP00000153506	693 (aa)	-	A0A2R8QT56
ENSDART00000150746	-	4412	-	ENSDARP00000125566	1310 (aa)	-	H0WFD4
ENSDART00000183761	-	5172	-	ENSDARP00000154589	228 (aa)	-	A0A2R8RWG0

Gene Model

Click here to download ENSDARG00000090160's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000090160's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000090160	zgc:173709	100	56.010	ENSDARG00000101327	znf1076	100	64.194
ENSDARG00000090160	zgc:173709	99	51.546	ENSDARG00000074365	zgc:171901	100	57.831
ENSDARG00000090160	zgc:173709	100	65.476	ENSDARG00000096210	znf1050	100	63.571
ENSDARG00000090160	zgc:173709	88	76.812	ENSDARG00000112606	BX248128.2	99	76.812
ENSDARG00000090160	zgc:173709	100	68.622	ENSDARG00000100961	zgc:174653	93	68.622
ENSDARG00000090160	zgc:173709	99	61.836	ENSDARG00000093994	znf1058	100	60.386
ENSDARG00000090160	zgc:173709	99	45.956	ENSDARG00000090942	CABZ01054394.1	97	45.780
ENSDARG00000090160	zgc:173709	100	61.667	ENSDARG00000086449	znf1055	100	60.000
ENSDARG00000090160	zgc:173709	87	59.712	ENSDARG00000100653	si:dkeyp-82b4.6	96	56.928
ENSDARG00000090160	zgc:173709	99	53.398	ENSDARG00000109255	si:ch211-234c11.2	99	53.398
ENSDARG00000090160	zgc:173709	99	51.958	ENSDARG00000111550	CABZ01002702.1	99	68.037
ENSDARG00000090160	zgc:173709	99	67.876	ENSDARG00000105137	zgc:173705	99	68.394
ENSDARG00000090160	zgc:173709	100	64.048	ENSDARG00000116216	znf1046	95	65.722
ENSDARG00000090160	zgc:173709	99	52.926	ENSDARG00000093041	si:ch211-234c11.2	95	52.926
ENSDARG00000090160	zgc:173709	100	96.867	ENSDARG00000094558	si:dkeyp-53e4.1	100	96.867
ENSDARG00000090160	zgc:173709	99	51.538	ENSDARG00000092507	znf1013	98	52.564
ENSDARG00000090160	zgc:173709	100	61.499	ENSDARG00000110658	zgc:174696	100	66.841
ENSDARG00000090160	zgc:173709	99	67.293	ENSDARG00000089814	znf1042	99	67.293
ENSDARG00000090160	zgc:173709	99	46.891	ENSDARG00000089598	si:cabz01054396.2	100	50.867
ENSDARG00000090160	zgc:173709	99	62.156	ENSDARG00000091477	znf1066	100	62.730
ENSDARG00000090160	zgc:173709	99	58.613	ENSDARG00000098270	znf1053	99	58.549
ENSDARG00000090160	zgc:173709	100	62.537	ENSDARG00000088000	znf1057	100	62.113
ENSDARG00000090160	zgc:173709	100	55.754	ENSDARG00000099736	CABZ01075078.1	100	63.427
ENSDARG00000090160	zgc:173709	99	54.491	ENSDARG00000097812	si:ch73-144d13.5	100	54.491
ENSDARG00000090160	zgc:173709	100	64.524	ENSDARG00000102600	CABZ01003344.1	99	59.173
ENSDARG00000090160	zgc:173709	99	57.407	ENSDARG00000114396	znf1017	100	51.046
ENSDARG00000090160	zgc:173709	99	47.607	ENSDARG00000086223	si:ch73-144d13.4	100	47.607
ENSDARG00000090160	zgc:173709	100	97.389	ENSDARG00000096041	si:ch211-162i8.2	100	97.389
ENSDARG00000090160	zgc:173709	99	57.436	ENSDARG00000114947	BX465848.1	99	64.872
ENSDARG00000090160	zgc:173709	99	48.364	ENSDARG00000074298	znf1015	100	50.000
ENSDARG00000090160	zgc:173709	99	55.411	ENSDARG00000102027	si:dkey-172k15.11	97	55.411
ENSDARG00000090160	zgc:173709	99	64.249	ENSDARG00000114437	zgc:173705	99	68.325
ENSDARG00000090160	zgc:173709	100	97.128	ENSDARG00000102673	si:dkey-26i24.1	100	97.128
ENSDARG00000090160	zgc:173709	100	66.408	ENSDARG00000098087	si:dkey-30f3.2	100	72.846
ENSDARG00000090160	zgc:173709	100	63.810	ENSDARG00000091994	znf1048	100	61.667
ENSDARG00000090160	zgc:173709	99	60.417	ENSDARG00000100509	si:dkey-82i20.2	99	60.417
ENSDARG00000090160	zgc:173709	99	68.444	ENSDARG00000113808	si:dkeyp-82b4.6	89	68.444
ENSDARG00000090160	zgc:173709	99	48.276	ENSDARG00000102800	CABZ01081752.2	99	49.383
ENSDARG00000090160	zgc:173709	100	97.911	ENSDARG00000103471	si:dkey-199m13.4	100	97.911
ENSDARG00000090160	zgc:173709	99	70.320	ENSDARG00000102008	si:dkey-72l17.6	99	61.214
ENSDARG00000090160	zgc:173709	99	62.154	ENSDARG00000112103	si:dkey-16p19.1	99	59.894
ENSDARG00000090160	zgc:173709	100	64.524	ENSDARG00000101137	znf999	100	73.333
ENSDARG00000090160	zgc:173709	99	57.391	ENSDARG00000111465	znf1104	100	57.391
ENSDARG00000090160	zgc:173709	92	67.787	ENSDARG00000116177	znf1127	92	67.787
ENSDARG00000090160	zgc:173709	100	64.286	ENSDARG00000098986	znf1040	100	61.190
ENSDARG00000090160	zgc:173709	99	51.980	ENSDARG00000103346	si:dkeyp-85d8.5	100	51.980
ENSDARG00000090160	zgc:173709	99	63.397	ENSDARG00000098071	znf1049	100	61.244
ENSDARG00000090160	zgc:173709	99	53.525	ENSDARG00000098604	si:dkey-14o6.4	100	53.525
ENSDARG00000090160	zgc:173709	99	49.383	ENSDARG00000103244	CABZ01081752.3	98	48.571
ENSDARG00000090160	zgc:173709	100	97.650	ENSDARG00000103636	zgc:173702	100	97.650
ENSDARG00000090160	zgc:173709	99	50.510	ENSDARG00000089715	si:cabz01054394.7	96	46.296
ENSDARG00000090160	zgc:173709	100	68.810	ENSDARG00000105067	znf1043	100	68.810
ENSDARG00000090160	zgc:173709	99	53.097	ENSDARG00000098991	znf1095	98	53.501
ENSDARG00000090160	zgc:173709	93	64.444	ENSDARG00000116920	BX465848.2	91	64.444
ENSDARG00000090160	zgc:173709	99	68.653	ENSDARG00000100001	znf1096	99	68.912
ENSDARG00000090160	zgc:173709	99	54.444	ENSDARG00000110852	znf1111	100	54.444
ENSDARG00000090160	zgc:173709	99	60.119	ENSDARG00000098536	si:dkey-25i10.1	99	60.119
ENSDARG00000090160	zgc:173709	99	62.154	ENSDARG00000102561	AL645691.1	98	60.582
ENSDARG00000090160	zgc:173709	99	52.882	ENSDARG00000094443	znf1036	100	53.071
ENSDARG00000090160	zgc:173709	99	65.837	ENSDARG00000076272	znf1041	99	58.145
ENSDARG00000090160	zgc:173709	100	65.238	ENSDARG00000104074	znf1052	100	61.905
ENSDARG00000090160	zgc:173709	99	62.462	ENSDARG00000114793	CU182823.4	98	60.000
ENSDARG00000090160	zgc:173709	100	95.561	ENSDARG00000100842	si:ch211-223a21.4	100	95.561
ENSDARG00000090160	zgc:173709	100	67.700	ENSDARG00000102791	zgc:174704	100	74.674
ENSDARG00000090160	zgc:173709	99	69.430	ENSDARG00000109381	CU457778.2	99	69.689
ENSDARG00000090160	zgc:173709	99	68.135	ENSDARG00000096189	si:dkey-54j5.2	99	68.394
ENSDARG00000090160	zgc:173709	100	66.582	ENSDARG00000104407	BX649453.1	100	66.582
ENSDARG00000090160	zgc:173709	99	47.807	ENSDARG00000096856	znf1012	100	51.852
ENSDARG00000090160	zgc:173709	99	62.467	ENSDARG00000098901	CABZ01002768.1	100	62.467
ENSDARG00000090160	zgc:173709	92	60.615	ENSDARG00000103495	zgc:173714	99	65.819
ENSDARG00000090160	zgc:173709	100	56.266	ENSDARG00000098196	znf1077	100	63.939
ENSDARG00000090160	zgc:173709	99	67.876	ENSDARG00000115450	CABZ01012382.1	99	68.135
ENSDARG00000090160	zgc:173709	100	56.010	ENSDARG00000098430	znf1078	100	64.194
ENSDARG00000090160	zgc:173709	92	54.722	ENSDARG00000095605	CR846087.3	99	62.500
ENSDARG00000090160	zgc:173709	99	59.955	ENSDARG00000103310	znf1053	99	66.129
ENSDARG00000090160	zgc:173709	99	62.462	ENSDARG00000103721	si:dkey-122c11.7	99	59.631
ENSDARG00000090160	zgc:173709	100	97.650	ENSDARG00000105306	si:dkeyp-44b5.5	100	97.650
ENSDARG00000090160	zgc:173709	99	68.394	ENSDARG00000112725	si:dkey-22h13.2	99	69.110
ENSDARG00000090160	zgc:173709	100	64.048	ENSDARG00000092938	znf1047	99	58.656
ENSDARG00000090160	zgc:173709	100	96.345	ENSDARG00000110229	zgc:173702	100	96.345
ENSDARG00000090160	zgc:173709	100	56.777	ENSDARG00000115655	znf1078	100	64.194

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0008150	biological_process	-	ND	Process
GO:0046872	metal ion binding	-	IEA	Function