EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000090292 (Gene tree)
Gene ID: 100148343
Gene Symbol: ralyl
Alias: wu:fq32h04
Full Name: RALY RNA binding protein like
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 34854 bases
Position: chr2:31719439-31754292
Accession: ZDB-GENE-060607-5
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000147262	RRM_1	PF00076.22	2.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000192498	-	930	-	ENSDARP00000147262	198 (aa)	-	A0A2R8Q0R8
ENSDART00000130903	-	724	XM_002660835	ENSDARP00000105963	206 (aa)	XP_002660881	E7F3E5

Gene Model

Click here to download ENSDARG00000090292's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000090292's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000090292	ralyl	73	71.034	ENSDARG00000059972	raly	62	65.116
ENSDARG00000090292	ralyl	76	56.604	ENSDARG00000053810	hnrnpc	51	56.790
ENSDARG00000090292	ralyl	78	56.875	ENSDARG00000103845	zgc:55733	67	56.322

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000090292	ralyl	81	79.630	ENSAPOG00000008744	-	59	76.608	Acanthochromis_polyacanthus
ENSDARG00000090292	ralyl	81	74.706	ENSACIG00000007143	-	62	74.706	Amphilophus_citrinellus
ENSDARG00000090292	ralyl	81	77.160	ENSAOCG00000001605	-	59	75.439	Amphiprion_ocellaris
ENSDARG00000090292	ralyl	81	80.247	ENSAOCG00000023599	-	63	73.224	Amphiprion_ocellaris
ENSDARG00000090292	ralyl	81	78.395	ENSATEG00000023356	-	66	76.608	Anabas_testudineus
ENSDARG00000090292	ralyl	81	72.989	ENSATEG00000022219	-	58	70.492	Anabas_testudineus
ENSDARG00000090292	ralyl	81	78.395	ENSACLG00000006949	-	59	76.608	Astatotilapia_calliptera
ENSDARG00000090292	ralyl	81	79.012	ENSACLG00000011720	-	59	76.023	Astatotilapia_calliptera
ENSDARG00000090292	ralyl	80	78.616	ENSAMXG00000032617	-	61	73.034	Astyanax_mexicanus
ENSDARG00000090292	ralyl	81	78.395	ENSAMXG00000019031	-	59	76.608	Astyanax_mexicanus
ENSDARG00000090292	ralyl	81	75.926	ENSCSEG00000014237	-	64	70.109	Cynoglossus_semilaevis
ENSDARG00000090292	ralyl	81	79.012	ENSCVAG00000013624	-	60	74.719	Cyprinodon_variegatus
ENSDARG00000090292	ralyl	81	79.012	ENSCVAG00000018104	-	58	77.193	Cyprinodon_variegatus
ENSDARG00000090292	ralyl	78	66.038	ENSELUG00000001702	-	63	66.071	Esox_lucius
ENSDARG00000090292	ralyl	83	67.273	ENSGMOG00000005914	-	100	67.273	Gadus_morhua
ENSDARG00000090292	ralyl	94	70.370	ENSGACG00000004991	-	97	70.370	Gasterosteus_aculeatus
ENSDARG00000090292	ralyl	81	79.012	ENSHBUG00000010040	-	63	72.131	Haplochromis_burtoni
ENSDARG00000090292	ralyl	81	78.395	ENSHBUG00000015412	-	59	76.608	Haplochromis_burtoni
ENSDARG00000090292	ralyl	80	77.987	ENSIPUG00000000507	ralyl	59	76.608	Ictalurus_punctatus
ENSDARG00000090292	ralyl	81	77.778	ENSKMAG00000018155	-	59	76.023	Kryptolebias_marmoratus
ENSDARG00000090292	ralyl	81	79.012	ENSKMAG00000022093	-	60	76.023	Kryptolebias_marmoratus
ENSDARG00000090292	ralyl	81	80.247	ENSLBEG00000012873	-	63	73.224	Labrus_bergylta
ENSDARG00000090292	ralyl	81	79.012	ENSLBEG00000011011	-	59	77.193	Labrus_bergylta
ENSDARG00000090292	ralyl	90	73.889	ENSLOCG00000012787	ralyl	62	73.889	Lepisosteus_oculatus
ENSDARG00000090292	ralyl	81	78.659	ENSMAMG00000001723	-	60	75.723	Mastacembelus_armatus
ENSDARG00000090292	ralyl	81	79.012	ENSMZEG00005024447	-	59	76.023	Maylandia_zebra
ENSDARG00000090292	ralyl	81	78.395	ENSMZEG00005018748	-	59	76.608	Maylandia_zebra
ENSDARG00000090292	ralyl	81	69.143	ENSMMOG00000020441	-	57	65.306	Mola_mola
ENSDARG00000090292	ralyl	81	77.778	ENSMALG00000012952	-	59	76.023	Monopterus_albus
ENSDARG00000090292	ralyl	81	78.395	ENSNBRG00000011376	-	58	76.608	Neolamprologus_brichardi
ENSDARG00000090292	ralyl	81	74.118	ENSNBRG00000011206	-	62	74.118	Neolamprologus_brichardi
ENSDARG00000090292	ralyl	81	78.395	ENSORLG00000017934	-	63	71.585	Oryzias_latipes
ENSDARG00000090292	ralyl	81	79.012	ENSORLG00000012719	-	59	77.193	Oryzias_latipes
ENSDARG00000090292	ralyl	81	79.012	ENSORLG00020004438	-	59	77.193	Oryzias_latipes_hni
ENSDARG00000090292	ralyl	81	77.778	ENSORLG00020000082	-	63	71.038	Oryzias_latipes_hni
ENSDARG00000090292	ralyl	81	79.012	ENSORLG00015004727	-	59	77.193	Oryzias_latipes_hsok
ENSDARG00000090292	ralyl	81	78.395	ENSORLG00015004280	-	63	71.585	Oryzias_latipes_hsok
ENSDARG00000090292	ralyl	81	77.778	ENSOMEG00000011821	-	63	71.038	Oryzias_melastigma
ENSDARG00000090292	ralyl	81	78.395	ENSOMEG00000001170	-	88	71.296	Oryzias_melastigma
ENSDARG00000090292	ralyl	83	77.844	ENSPKIG00000015926	-	60	76.744	Paramormyrops_kingsleyae
ENSDARG00000090292	ralyl	81	71.257	ENSPMGG00000009532	-	64	68.132	Periophthalmus_magnuspinnatus
ENSDARG00000090292	ralyl	81	68.485	ENSPMGG00000014481	-	73	67.241	Periophthalmus_magnuspinnatus
ENSDARG00000090292	ralyl	81	72.832	ENSPFOG00000006120	-	65	67.010	Poecilia_formosa
ENSDARG00000090292	ralyl	81	76.364	ENSPLAG00000011323	ralyl	61	74.713	Poecilia_latipinna
ENSDARG00000090292	ralyl	81	76.364	ENSPMEG00000023847	ralyl	61	74.713	Poecilia_mexicana
ENSDARG00000090292	ralyl	81	76.364	ENSPREG00000001956	ralyl	61	74.713	Poecilia_reticulata
ENSDARG00000090292	ralyl	81	78.395	ENSPREG00000013805	-	59	71.038	Poecilia_reticulata
ENSDARG00000090292	ralyl	81	78.395	ENSPNYG00000003548	-	59	76.608	Pundamilia_nyererei
ENSDARG00000090292	ralyl	81	74.118	ENSPNYG00000008772	-	62	74.118	Pundamilia_nyererei
ENSDARG00000090292	ralyl	84	77.381	ENSPNAG00000000498	-	52	77.059	Pygocentrus_nattereri
ENSDARG00000090292	ralyl	89	76.404	ENSPNAG00000026098	-	62	76.404	Pygocentrus_nattereri
ENSDARG00000090292	ralyl	81	79.012	ENSSFOG00015009401	-	58	77.193	Scleropages_formosus
ENSDARG00000090292	ralyl	81	69.136	ENSSFOG00015004575	-	57	67.836	Scleropages_formosus
ENSDARG00000090292	ralyl	81	77.778	ENSSMAG00000005608	-	59	76.023	Scophthalmus_maximus
ENSDARG00000090292	ralyl	81	78.659	ENSSMAG00000015907	-	56	78.659	Scophthalmus_maximus
ENSDARG00000090292	ralyl	81	78.395	ENSSDUG00000007587	-	59	76.608	Seriola_dumerili
ENSDARG00000090292	ralyl	81	80.247	ENSSDUG00000012473	-	59	77.193	Seriola_dumerili
ENSDARG00000090292	ralyl	81	78.395	ENSSLDG00000020603	-	58	76.608	Seriola_lalandi_dorsalis
ENSDARG00000090292	ralyl	81	80.247	ENSSLDG00000011534	-	59	77.193	Seriola_lalandi_dorsalis
ENSDARG00000090292	ralyl	88	69.143	ENSSPAG00000013858	-	60	69.143	Stegastes_partitus
ENSDARG00000090292	ralyl	81	79.012	ENSTRUG00000003829	-	60	76.023	Takifugu_rubripes
ENSDARG00000090292	ralyl	81	65.934	ENSTNIG00000005594	-	61	74.566	Tetraodon_nigroviridis
ENSDARG00000090292	ralyl	81	69.939	ENSXETG00000017729	ralyl	62	65.556	Xenopus_tropicalis
ENSDARG00000090292	ralyl	81	72.832	ENSXCOG00000015156	-	57	71.429	Xiphophorus_couchianus
ENSDARG00000090292	ralyl	81	79.630	ENSXMAG00000007614	-	59	76.608	Xiphophorus_maculatus
ENSDARG00000090292	ralyl	81	78.395	ENSXMAG00000008396	-	59	76.608	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003723	RNA binding	-	IEA	Function