EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000090462 (Gene tree)
Gene ID: 751640
Gene Symbol: mrpl20
Alias: wu:fa27e09|zgc:153312
Full Name: mitochondrial ribosomal protein L20
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 1662 bases
Position: chr22:9165-10826
Accession: ZDB-GENE-030131-5299
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000111625	Ribosomal_L20	PF00453.18	3.9e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000125700	-	650	-	ENSDARP00000111625	149 (aa)	-	F1QKE9

Gene Model

Click here to download ENSDARG00000090462's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000090462's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000090462	mrpl20	100	61.745	ENSG00000242485	MRPL20	100	61.745	Homo_sapiens
ENSDARG00000090462	mrpl20	100	78.523	ENSAPOG00000011835	mrpl20	100	78.523	Acanthochromis_polyacanthus
ENSDARG00000090462	mrpl20	90	64.179	ENSAMEG00000013932	MRPL20	90	64.179	Ailuropoda_melanoleuca
ENSDARG00000090462	mrpl20	99	80.405	ENSACIG00000019179	mrpl20	99	80.405	Amphilophus_citrinellus
ENSDARG00000090462	mrpl20	100	79.866	ENSAOCG00000007734	mrpl20	100	79.866	Amphiprion_ocellaris
ENSDARG00000090462	mrpl20	100	79.195	ENSAPEG00000014049	mrpl20	100	79.195	Amphiprion_percula
ENSDARG00000090462	mrpl20	100	77.181	ENSATEG00000007369	mrpl20	100	77.181	Anabas_testudineus
ENSDARG00000090462	mrpl20	99	58.108	ENSACAG00000009143	MRPL20	99	58.108	Anolis_carolinensis
ENSDARG00000090462	mrpl20	88	61.832	ENSANAG00000021078	-	86	61.832	Aotus_nancymaae
ENSDARG00000090462	mrpl20	93	76.087	ENSACLG00000021726	mrpl20	88	76.087	Astatotilapia_calliptera
ENSDARG00000090462	mrpl20	99	67.568	ENSAMXG00000035403	mrpl20	99	67.568	Astyanax_mexicanus
ENSDARG00000090462	mrpl20	100	61.074	ENSBTAG00000004872	MRPL20	75	61.074	Bos_taurus
ENSDARG00000090462	mrpl20	100	63.087	ENSCJAG00000039231	-	100	63.087	Callithrix_jacchus
ENSDARG00000090462	mrpl20	100	61.745	ENSCAFG00000019259	MRPL20	100	61.745	Canis_familiaris
ENSDARG00000090462	mrpl20	98	51.370	ENSCAFG00020025880	-	78	51.370	Canis_lupus_dingo
ENSDARG00000090462	mrpl20	100	60.403	ENSCHIG00000010545	MRPL20	100	60.403	Capra_hircus
ENSDARG00000090462	mrpl20	100	64.430	ENSTSYG00000033620	MRPL20	100	64.430	Carlito_syrichta
ENSDARG00000090462	mrpl20	100	61.074	ENSCPOG00000023001	MRPL20	100	61.074	Cavia_porcellus
ENSDARG00000090462	mrpl20	100	63.758	ENSCCAG00000032768	-	100	63.758	Cebus_capucinus
ENSDARG00000090462	mrpl20	84	53.600	ENSCATG00000040437	-	65	53.600	Cercocebus_atys
ENSDARG00000090462	mrpl20	100	62.416	ENSCATG00000033927	MRPL20	100	62.416	Cercocebus_atys
ENSDARG00000090462	mrpl20	100	61.745	ENSCLAG00000009757	-	100	61.745	Chinchilla_lanigera
ENSDARG00000090462	mrpl20	100	42.953	ENSCLAG00000011866	-	100	42.953	Chinchilla_lanigera
ENSDARG00000090462	mrpl20	100	62.416	ENSCSAG00000000688	-	100	62.416	Chlorocebus_sabaeus
ENSDARG00000090462	mrpl20	100	61.074	ENSCSAG00000019479	-	100	61.074	Chlorocebus_sabaeus
ENSDARG00000090462	mrpl20	99	63.265	ENSCPBG00000022905	MRPL20	99	63.265	Chrysemys_picta_bellii
ENSDARG00000090462	mrpl20	100	50.336	ENSCANG00000039625	MRPL20	100	50.336	Colobus_angolensis_palliatus
ENSDARG00000090462	mrpl20	100	61.745	ENSCGRG00001024028	Mrpl20	100	61.745	Cricetulus_griseus_chok1gshd
ENSDARG00000090462	mrpl20	100	61.745	ENSCGRG00000007447	Mrpl20	100	61.745	Cricetulus_griseus_crigri
ENSDARG00000090462	mrpl20	98	77.397	ENSCSEG00000002016	mrpl20	85	77.397	Cynoglossus_semilaevis
ENSDARG00000090462	mrpl20	97	75.862	ENSCVAG00000022768	mrpl20	98	75.862	Cyprinodon_variegatus
ENSDARG00000090462	mrpl20	99	63.265	ENSDNOG00000044958	MRPL20	99	63.265	Dasypus_novemcinctus
ENSDARG00000090462	mrpl20	56	59.036	ENSDORG00000028591	Mrpl20	100	59.036	Dipodomys_ordii
ENSDARG00000090462	mrpl20	86	42.636	FBgn0036335	mRpL20	86	42.636	Drosophila_melanogaster
ENSDARG00000090462	mrpl20	99	51.701	ENSETEG00000012315	MRPL20	99	51.701	Echinops_telfairi
ENSDARG00000090462	mrpl20	99	61.905	ENSEBUG00000002214	mrpl20	99	61.905	Eptatretus_burgeri
ENSDARG00000090462	mrpl20	100	63.758	ENSEASG00005014515	MRPL20	100	63.758	Equus_asinus_asinus
ENSDARG00000090462	mrpl20	100	63.758	ENSECAG00000018364	MRPL20	100	63.758	Equus_caballus
ENSDARG00000090462	mrpl20	81	46.667	ENSEEUG00000004596	-	100	46.667	Erinaceus_europaeus
ENSDARG00000090462	mrpl20	100	77.852	ENSELUG00000013398	mrpl20	100	77.852	Esox_lucius
ENSDARG00000090462	mrpl20	99	61.905	ENSFCAG00000033203	MRPL20	99	61.905	Felis_catus
ENSDARG00000090462	mrpl20	100	59.060	ENSFALG00000009334	MRPL20	100	59.060	Ficedula_albicollis
ENSDARG00000090462	mrpl20	100	61.074	ENSFDAG00000013320	MRPL20	100	61.074	Fukomys_damarensis
ENSDARG00000090462	mrpl20	97	77.241	ENSFHEG00000004769	mrpl20	98	77.241	Fundulus_heteroclitus
ENSDARG00000090462	mrpl20	97	75.694	ENSGMOG00000008125	mrpl20	100	75.694	Gadus_morhua
ENSDARG00000090462	mrpl20	99	59.864	ENSGALG00000001542	MRPL20	99	59.864	Gallus_gallus
ENSDARG00000090462	mrpl20	97	79.310	ENSGAFG00000021580	mrpl20	98	79.310	Gambusia_affinis
ENSDARG00000090462	mrpl20	100	77.181	ENSGACG00000001134	mrpl20	100	77.181	Gasterosteus_aculeatus
ENSDARG00000090462	mrpl20	99	61.905	ENSGAGG00000001945	MRPL20	99	61.905	Gopherus_agassizii
ENSDARG00000090462	mrpl20	100	61.745	ENSGGOG00000027251	-	100	61.745	Gorilla_gorilla
ENSDARG00000090462	mrpl20	100	77.852	ENSHBUG00000023626	mrpl20	100	77.852	Haplochromis_burtoni
ENSDARG00000090462	mrpl20	100	59.732	ENSHGLG00000017538	MRPL20	100	59.732	Heterocephalus_glaber_female
ENSDARG00000090462	mrpl20	100	59.732	ENSHGLG00100012816	MRPL20	100	59.732	Heterocephalus_glaber_male
ENSDARG00000090462	mrpl20	98	72.603	ENSHCOG00000005830	mrpl20	98	72.603	Hippocampus_comes
ENSDARG00000090462	mrpl20	100	82.550	ENSIPUG00000018055	mrpl20	100	82.550	Ictalurus_punctatus
ENSDARG00000090462	mrpl20	100	62.416	ENSJJAG00000020728	Mrpl20	100	62.416	Jaculus_jaculus
ENSDARG00000090462	mrpl20	99	73.649	ENSKMAG00000021650	mrpl20	99	73.649	Kryptolebias_marmoratus
ENSDARG00000090462	mrpl20	100	77.181	ENSLBEG00000021562	mrpl20	100	77.181	Labrus_bergylta
ENSDARG00000090462	mrpl20	100	68.456	ENSLACG00000019149	MRPL20	100	68.456	Latimeria_chalumnae
ENSDARG00000090462	mrpl20	99	63.265	ENSLAFG00000010706	MRPL20	99	63.265	Loxodonta_africana
ENSDARG00000090462	mrpl20	100	62.416	ENSMFAG00000043214	MRPL20	100	62.416	Macaca_fascicularis
ENSDARG00000090462	mrpl20	94	51.429	ENSMFAG00000046195	-	83	51.429	Macaca_fascicularis
ENSDARG00000090462	mrpl20	64	65.263	ENSMMUG00000038877	MRPL20	73	65.263	Macaca_mulatta
ENSDARG00000090462	mrpl20	100	62.416	ENSMNEG00000041891	MRPL20	100	62.416	Macaca_nemestrina
ENSDARG00000090462	mrpl20	89	52.632	ENSMNEG00000000027	-	68	52.632	Macaca_nemestrina
ENSDARG00000090462	mrpl20	89	52.273	ENSMLEG00000037605	-	81	52.273	Mandrillus_leucophaeus
ENSDARG00000090462	mrpl20	81	62.500	ENSMLEG00000037086	MRPL20	100	62.500	Mandrillus_leucophaeus
ENSDARG00000090462	mrpl20	100	78.523	ENSMAMG00000023884	mrpl20	100	78.523	Mastacembelus_armatus
ENSDARG00000090462	mrpl20	100	77.852	ENSMZEG00005011376	mrpl20	100	77.852	Maylandia_zebra
ENSDARG00000090462	mrpl20	80	61.345	ENSMGAG00000002774	MRPL20	80	61.345	Meleagris_gallopavo
ENSDARG00000090462	mrpl20	100	61.074	ENSMAUG00000013299	Mrpl20	100	61.074	Mesocricetus_auratus
ENSDARG00000090462	mrpl20	100	63.087	ENSMICG00000041892	MRPL20	100	63.087	Microcebus_murinus
ENSDARG00000090462	mrpl20	100	58.389	ENSMOCG00000009545	-	100	58.389	Microtus_ochrogaster
ENSDARG00000090462	mrpl20	100	62.416	ENSMOCG00000000404	-	100	62.416	Microtus_ochrogaster
ENSDARG00000090462	mrpl20	100	58.389	ENSMMOG00000021753	mrpl20	100	58.389	Mola_mola
ENSDARG00000090462	mrpl20	99	55.102	ENSMODG00000006562	MRPL20	99	55.102	Monodelphis_domestica
ENSDARG00000090462	mrpl20	100	76.510	ENSMALG00000018593	mrpl20	100	76.510	Monopterus_albus
ENSDARG00000090462	mrpl20	100	63.087	MGP_CAROLIEiJ_G0026904	Mrpl20	100	63.087	Mus_caroli
ENSDARG00000090462	mrpl20	100	63.758	ENSMUSG00000029066	Mrpl20	100	63.758	Mus_musculus
ENSDARG00000090462	mrpl20	100	60.403	MGP_PahariEiJ_G0029252	Mrpl20	100	60.403	Mus_pahari
ENSDARG00000090462	mrpl20	100	63.758	MGP_SPRETEiJ_G0027898	Mrpl20	100	63.758	Mus_spretus
ENSDARG00000090462	mrpl20	100	62.416	ENSMLUG00000011857	MRPL20	100	62.416	Myotis_lucifugus
ENSDARG00000090462	mrpl20	100	61.745	ENSNGAG00000021688	Mrpl20	100	61.745	Nannospalax_galili
ENSDARG00000090462	mrpl20	100	77.852	ENSNBRG00000006018	mrpl20	100	77.852	Neolamprologus_brichardi
ENSDARG00000090462	mrpl20	56	60.714	ENSNLEG00000013868	-	82	60.714	Nomascus_leucogenys
ENSDARG00000090462	mrpl20	100	61.074	ENSODEG00000010734	MRPL20	100	61.074	Octodon_degus
ENSDARG00000090462	mrpl20	100	78.523	ENSONIG00000018914	mrpl20	100	78.523	Oreochromis_niloticus
ENSDARG00000090462	mrpl20	100	75.168	ENSORLG00000018304	mrpl20	100	75.168	Oryzias_latipes
ENSDARG00000090462	mrpl20	100	75.168	ENSORLG00020009128	mrpl20	100	75.168	Oryzias_latipes_hni
ENSDARG00000090462	mrpl20	100	75.168	ENSORLG00015005156	mrpl20	100	75.168	Oryzias_latipes_hsok
ENSDARG00000090462	mrpl20	100	75.839	ENSOMEG00000015654	mrpl20	100	75.839	Oryzias_melastigma
ENSDARG00000090462	mrpl20	100	62.416	ENSOGAG00000005968	MRPL20	100	62.416	Otolemur_garnettii
ENSDARG00000090462	mrpl20	100	60.403	ENSOARG00000003529	MRPL20	100	60.403	Ovis_aries
ENSDARG00000090462	mrpl20	100	61.745	ENSPPAG00000042350	-	100	61.745	Pan_paniscus
ENSDARG00000090462	mrpl20	99	62.585	ENSPPRG00000009188	MRPL20	99	62.585	Panthera_pardus
ENSDARG00000090462	mrpl20	55	62.195	ENSPTIG00000020769	MRPL20	90	60.976	Panthera_tigris_altaica
ENSDARG00000090462	mrpl20	100	61.745	ENSPTRG00000000029	MRPL20	100	61.745	Pan_troglodytes
ENSDARG00000090462	mrpl20	100	62.416	ENSPANG00000015802	MRPL20	100	62.416	Papio_anubis
ENSDARG00000090462	mrpl20	94	50.000	ENSPANG00000036197	-	100	50.000	Papio_anubis
ENSDARG00000090462	mrpl20	100	71.141	ENSPKIG00000002248	mrpl20	100	71.141	Paramormyrops_kingsleyae
ENSDARG00000090462	mrpl20	93	55.396	ENSPSIG00000003939	MRPL20	98	55.396	Pelodiscus_sinensis
ENSDARG00000090462	mrpl20	100	77.852	ENSPMGG00000003966	mrpl20	100	77.852	Periophthalmus_magnuspinnatus
ENSDARG00000090462	mrpl20	50	37.662	ENSPMGG00000022271	-	73	30.769	Periophthalmus_magnuspinnatus
ENSDARG00000090462	mrpl20	100	49.664	ENSPEMG00000009458	-	85	49.664	Peromyscus_maniculatus_bairdii
ENSDARG00000090462	mrpl20	58	41.860	ENSPMAG00000009990	-	68	41.860	Petromyzon_marinus
ENSDARG00000090462	mrpl20	99	59.184	ENSPCIG00000007747	MRPL20	99	59.184	Phascolarctos_cinereus
ENSDARG00000090462	mrpl20	97	77.931	ENSPFOG00000018163	mrpl20	98	77.931	Poecilia_formosa
ENSDARG00000090462	mrpl20	97	77.931	ENSPLAG00000016451	mrpl20	98	77.931	Poecilia_latipinna
ENSDARG00000090462	mrpl20	97	78.621	ENSPMEG00000002561	mrpl20	98	78.621	Poecilia_mexicana
ENSDARG00000090462	mrpl20	97	71.918	ENSPREG00000004925	mrpl20	98	71.918	Poecilia_reticulata
ENSDARG00000090462	mrpl20	99	63.265	ENSPCAG00000001425	MRPL20	99	63.265	Procavia_capensis
ENSDARG00000090462	mrpl20	99	58.503	ENSPCOG00000004450	-	99	58.503	Propithecus_coquereli
ENSDARG00000090462	mrpl20	100	62.416	ENSPCOG00000025653	-	100	62.416	Propithecus_coquereli
ENSDARG00000090462	mrpl20	100	77.852	ENSPNYG00000008626	mrpl20	100	77.852	Pundamilia_nyererei
ENSDARG00000090462	mrpl20	100	79.866	ENSPNAG00000016694	mrpl20	100	79.866	Pygocentrus_nattereri
ENSDARG00000090462	mrpl20	100	61.745	ENSRNOG00000018647	Mrpl20	100	61.745	Rattus_norvegicus
ENSDARG00000090462	mrpl20	100	61.745	ENSRBIG00000042278	MRPL20	100	61.745	Rhinopithecus_bieti
ENSDARG00000090462	mrpl20	100	61.745	ENSRROG00000003574	MRPL20	100	61.745	Rhinopithecus_roxellana
ENSDARG00000090462	mrpl20	56	60.241	ENSSBOG00000035454	-	100	60.241	Saimiri_boliviensis_boliviensis
ENSDARG00000090462	mrpl20	99	53.595	ENSSHAG00000008197	MRPL20	99	53.595	Sarcophilus_harrisii
ENSDARG00000090462	mrpl20	100	74.497	ENSSFOG00015016009	mrpl20	100	74.497	Scleropages_formosus
ENSDARG00000090462	mrpl20	100	76.510	ENSSMAG00000000214	mrpl20	100	76.510	Scophthalmus_maximus
ENSDARG00000090462	mrpl20	100	77.181	ENSSDUG00000008646	mrpl20	100	77.181	Seriola_dumerili
ENSDARG00000090462	mrpl20	100	77.852	ENSSLDG00000023171	mrpl20	100	77.852	Seriola_lalandi_dorsalis
ENSDARG00000090462	mrpl20	100	61.074	ENSSPUG00000016911	MRPL20	100	61.074	Sphenodon_punctatus
ENSDARG00000090462	mrpl20	100	79.195	ENSSPAG00000012887	mrpl20	100	79.195	Stegastes_partitus
ENSDARG00000090462	mrpl20	99	62.585	ENSSSCG00000033374	MRPL20	99	62.585	Sus_scrofa
ENSDARG00000090462	mrpl20	81	55.372	ENSTGUG00000003113	MRPL20	98	55.372	Taeniopygia_guttata
ENSDARG00000090462	mrpl20	97	75.172	ENSTRUG00000021410	mrpl20	97	75.172	Takifugu_rubripes
ENSDARG00000090462	mrpl20	100	75.168	ENSTNIG00000014657	mrpl20	100	75.168	Tetraodon_nigroviridis
ENSDARG00000090462	mrpl20	100	63.087	ENSTBEG00000008735	MRPL20	100	63.087	Tupaia_belangeri
ENSDARG00000090462	mrpl20	79	60.169	ENSTTRG00000017046	MRPL20	98	60.169	Tursiops_truncatus
ENSDARG00000090462	mrpl20	100	63.087	ENSUAMG00000012829	-	100	63.087	Ursus_americanus
ENSDARG00000090462	mrpl20	80	47.059	ENSUAMG00000028406	-	76	47.059	Ursus_americanus
ENSDARG00000090462	mrpl20	56	60.714	ENSUMAG00000001917	-	74	60.714	Ursus_maritimus
ENSDARG00000090462	mrpl20	80	46.218	ENSUMAG00000003240	-	76	46.218	Ursus_maritimus
ENSDARG00000090462	mrpl20	56	59.036	ENSVPAG00000001846	-	100	59.036	Vicugna_pacos
ENSDARG00000090462	mrpl20	100	62.416	ENSVVUG00000004455	MRPL20	100	62.416	Vulpes_vulpes
ENSDARG00000090462	mrpl20	100	65.772	ENSXETG00000011118	mrpl20	100	65.772	Xenopus_tropicalis
ENSDARG00000090462	mrpl20	97	77.931	ENSXCOG00000004220	mrpl20	98	77.931	Xiphophorus_couchianus
ENSDARG00000090462	mrpl20	97	77.931	ENSXMAG00000016652	mrpl20	98	77.931	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000027	ribosomal large subunit assembly	21873635.	IBA	Process
GO:0003735	structural constituent of ribosome	21873635.	IBA	Function
GO:0003735	structural constituent of ribosome	-	IEA	Function
GO:0005761	mitochondrial ribosome	21873635.	IBA	Component
GO:0005840	ribosome	-	IEA	Component
GO:0006412	translation	-	IEA	Process
GO:0019843	rRNA binding	-	IEA	Function