EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSDARG00000090656 (Gene tree)
Gene ID: 100537923
Gene Symbol: tomm20a
Alias: arid4b|ch1073-321c8.1|wu:fk47b11
Full Name: translocase of outer mitochondrial membrane 20
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 110628 bases
Position: chr13:49597258-49707885
Accession: ZDB-GENE-040426-1976
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000107839	Tudor-knot	PF11717.8	2.7e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000148083	-	1161	-	ENSDARP00000112863	387 (aa)	-	B8JMI8
ENSDART00000128415	-	3774	XM_005173032	ENSDARP00000107839	1239 (aa)	XP_005173089	F1R2N8
ENSDART00000189805	-	3591	XM_003199758	ENSDARP00000157304	1178 (aa)	XP_003199806	A0A2R8QUS2

Gene Model

Click here to download ENSDARG00000090656's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000090656's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000090656	tomm20a	87	73.634	ENSG00000054267	ARID4B	91	73.397	Homo_sapiens
ENSDARG00000090656	tomm20a	99	66.846	ENSAPOG00000010823	tomm20a	100	65.758	Acanthochromis_polyacanthus
ENSDARG00000090656	tomm20a	90	84.597	ENSACIG00000006313	tomm20a	99	84.597	Amphilophus_citrinellus
ENSDARG00000090656	tomm20a	99	66.232	ENSAOCG00000003330	tomm20a	100	65.530	Amphiprion_ocellaris
ENSDARG00000090656	tomm20a	99	66.002	ENSAPEG00000024018	tomm20a	100	65.379	Amphiprion_percula
ENSDARG00000090656	tomm20a	99	66.154	ENSATEG00000014930	tomm20a	100	66.138	Anabas_testudineus
ENSDARG00000090656	tomm20a	99	50.112	ENSACAG00000001289	ARID4B	99	51.412	Anolis_carolinensis
ENSDARG00000090656	tomm20a	90	75.476	ENSACLG00000023521	tomm20a	99	73.810	Astatotilapia_calliptera
ENSDARG00000090656	tomm20a	95	62.510	ENSAMXG00000003657	tomm20a	92	76.082	Astyanax_mexicanus
ENSDARG00000090656	tomm20a	65	93.651	ENSCHOG00000001152	ARID4B	62	93.651	Choloepus_hoffmanni
ENSDARG00000090656	tomm20a	99	64.706	ENSCVAG00000003244	tomm20a	100	64.809	Cyprinodon_variegatus
ENSDARG00000090656	tomm20a	56	45.466	ENSDNOG00000005711	ARID4B	100	45.256	Dasypus_novemcinctus
ENSDARG00000090656	tomm20a	87	61.111	ENSETEG00000005596	ARID4B	90	60.800	Echinops_telfairi
ENSDARG00000090656	tomm20a	53	82.927	ENSEEUG00000005378	ARID4B	76	82.927	Erinaceus_europaeus
ENSDARG00000090656	tomm20a	66	48.546	ENSELUG00000018441	tomm20a	79	55.634	Esox_lucius
ENSDARG00000090656	tomm20a	99	65.197	ENSFHEG00000003798	tomm20a	100	65.042	Fundulus_heteroclitus
ENSDARG00000090656	tomm20a	91	63.763	ENSGMOG00000018747	tomm20a	93	64.509	Gadus_morhua
ENSDARG00000090656	tomm20a	99	63.728	ENSGACG00000004298	tomm20a	100	63.574	Gasterosteus_aculeatus
ENSDARG00000090656	tomm20a	56	44.757	ENSGAGG00000020544	ARID4B	98	50.416	Gopherus_agassizii
ENSDARG00000090656	tomm20a	99	65.509	ENSHBUG00000020369	tomm20a	100	65.504	Haplochromis_burtoni
ENSDARG00000090656	tomm20a	98	54.581	ENSHCOG00000010376	tomm20a	99	56.552	Hippocampus_comes
ENSDARG00000090656	tomm20a	100	64.335	ENSIPUG00000014234	arid4b	100	64.134	Ictalurus_punctatus
ENSDARG00000090656	tomm20a	91	61.176	ENSKMAG00000010987	tomm20a	100	57.439	Kryptolebias_marmoratus
ENSDARG00000090656	tomm20a	100	60.764	ENSLOCG00000015899	tomm20a	100	61.270	Lepisosteus_oculatus
ENSDARG00000090656	tomm20a	99	51.320	ENSLAFG00000014295	ARID4B	99	51.473	Loxodonta_africana
ENSDARG00000090656	tomm20a	93	63.902	ENSMAMG00000017134	tomm20a	99	64.513	Mastacembelus_armatus
ENSDARG00000090656	tomm20a	99	65.509	ENSMZEG00005009879	tomm20a	100	65.504	Maylandia_zebra
ENSDARG00000090656	tomm20a	90	83.099	ENSMMOG00000000561	tomm20a	98	82.394	Mola_mola
ENSDARG00000090656	tomm20a	99	65.325	ENSMALG00000005205	tomm20a	100	66.009	Monopterus_albus
ENSDARG00000090656	tomm20a	90	82.033	ENSNBRG00000019684	tomm20a	99	82.742	Neolamprologus_brichardi
ENSDARG00000090656	tomm20a	100	63.374	ENSORLG00000012510	tomm20a	100	63.921	Oryzias_latipes
ENSDARG00000090656	tomm20a	91	80.872	ENSORLG00020013988	tomm20a	100	79.206	Oryzias_latipes_hni
ENSDARG00000090656	tomm20a	91	81.022	ENSORLG00015022835	tomm20a	100	79.812	Oryzias_latipes_hsok
ENSDARG00000090656	tomm20a	100	64.747	ENSOMEG00000000521	tomm20a	100	64.828	Oryzias_melastigma
ENSDARG00000090656	tomm20a	100	52.158	ENSPCIG00000029756	ARID4B	100	51.852	Phascolarctos_cinereus
ENSDARG00000090656	tomm20a	99	65.349	ENSPFOG00000019430	tomm20a	100	66.081	Poecilia_formosa
ENSDARG00000090656	tomm20a	99	65.426	ENSPLAG00000010554	tomm20a	100	65.930	Poecilia_latipinna
ENSDARG00000090656	tomm20a	99	63.781	ENSPMEG00000003093	tomm20a	100	60.238	Poecilia_mexicana
ENSDARG00000090656	tomm20a	99	66.096	ENSPREG00000007996	tomm20a	100	66.182	Poecilia_reticulata
ENSDARG00000090656	tomm20a	99	62.908	ENSPNYG00000013988	tomm20a	100	62.605	Pundamilia_nyererei
ENSDARG00000090656	tomm20a	100	70.084	ENSPNAG00000000523	tomm20a	93	68.953	Pygocentrus_nattereri
ENSDARG00000090656	tomm20a	90	70.960	ENSRBIG00000042029	ARID4B	93	48.731	Rhinopithecus_bieti
ENSDARG00000090656	tomm20a	100	51.282	ENSSHAG00000015214	ARID4B	100	50.111	Sarcophilus_harrisii
ENSDARG00000090656	tomm20a	100	58.757	ENSSFOG00015000132	arid4b	100	59.545	Scleropages_formosus
ENSDARG00000090656	tomm20a	74	49.641	ENSSFOG00015008923	tomm20a	100	49.643	Scleropages_formosus
ENSDARG00000090656	tomm20a	99	63.958	ENSSMAG00000010430	tomm20a	100	64.345	Scophthalmus_maximus
ENSDARG00000090656	tomm20a	99	66.049	ENSSDUG00000003019	tomm20a	100	64.643	Seriola_dumerili
ENSDARG00000090656	tomm20a	99	66.178	ENSSPAG00000007358	tomm20a	100	65.099	Stegastes_partitus
ENSDARG00000090656	tomm20a	66	51.848	ENSTRUG00000002893	tomm20a	100	50.491	Takifugu_rubripes
ENSDARG00000090656	tomm20a	72	66.346	ENSTBEG00000003961	ARID4B	68	66.106	Tupaia_belangeri
ENSDARG00000090656	tomm20a	50	73.397	ENSVPAG00000006841	ARID4B	69	58.587	Vicugna_pacos
ENSDARG00000090656	tomm20a	56	45.409	ENSVVUG00000008154	ARID4B	99	50.075	Vulpes_vulpes
ENSDARG00000090656	tomm20a	100	49.437	ENSXETG00000024651	arid4b	100	48.498	Xenopus_tropicalis
ENSDARG00000090656	tomm20a	99	65.757	ENSXMAG00000006538	tomm20a	100	66.692	Xiphophorus_maculatus