EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000090740 (Gene tree)
Gene ID: -
Gene Symbol: zmp:0000001003
Alias: -
Full Name: zmp:0000001003
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 1008 bases
Position: chr3:7545733-7546740
Accession: ZDB-GENE-130530-1006
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000111406	zf-C2H2	PF00096.26	6.2e-41	1	7
ENSDARP00000111406	zf-C2H2	PF00096.26	6.2e-41	2	7
ENSDARP00000111406	zf-C2H2	PF00096.26	6.2e-41	3	7
ENSDARP00000111406	zf-C2H2	PF00096.26	6.2e-41	4	7
ENSDARP00000111406	zf-C2H2	PF00096.26	6.2e-41	5	7
ENSDARP00000111406	zf-C2H2	PF00096.26	6.2e-41	6	7
ENSDARP00000111406	zf-C2H2	PF00096.26	6.2e-41	7	7
ENSDARP00000111406	zf-met	PF12874.7	2e-05	1	2
ENSDARP00000111406	zf-met	PF12874.7	2e-05	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000128960	-	1008	-	ENSDARP00000111406	246 (aa)	-	E7F0W4

Gene Model

Click here to download ENSDARG00000090740's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000090740's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000090740	zmp:0000001003	100	65.854	ENSDARG00000093378	si:ch211-235i11.5	84	65.854
ENSDARG00000090740	zmp:0000001003	100	51.737	ENSDARG00000098898	si:ch211-255f4.2	99	51.737
ENSDARG00000090740	zmp:0000001003	100	60.000	ENSDARG00000101044	si:ch73-138e16.6	88	60.664
ENSDARG00000090740	zmp:0000001003	100	51.626	ENSDARG00000099986	si:ch211-207i20.2	60	51.626
ENSDARG00000090740	zmp:0000001003	100	65.447	ENSDARG00000097521	si:dkey-111k8.5	86	65.447
ENSDARG00000090740	zmp:0000001003	100	59.420	ENSDARG00000116814	CU570894.2	99	59.420
ENSDARG00000090740	zmp:0000001003	100	62.705	ENSDARG00000106565	CABZ01066720.1	93	62.705
ENSDARG00000090740	zmp:0000001003	100	61.828	ENSDARG00000069869	zgc:113030	98	61.828
ENSDARG00000090740	zmp:0000001003	100	69.291	ENSDARG00000102411	CR847850.1	90	69.291
ENSDARG00000090740	zmp:0000001003	100	62.810	ENSDARG00000105074	BX000701.2	99	62.810
ENSDARG00000090740	zmp:0000001003	100	62.097	ENSDARG00000088051	AL935044.1	99	62.097
ENSDARG00000090740	zmp:0000001003	100	68.718	ENSDARG00000115857	znf1001	93	68.718
ENSDARG00000090740	zmp:0000001003	100	63.713	ENSDARG00000099890	CU207221.2	99	63.713
ENSDARG00000090740	zmp:0000001003	92	67.401	ENSDARG00000098923	zgc:173577	91	67.401
ENSDARG00000090740	zmp:0000001003	100	67.401	ENSDARG00000113011	zgc:113102	93	67.401
ENSDARG00000090740	zmp:0000001003	100	59.406	ENSDARG00000111899	zgc:171435	74	55.507
ENSDARG00000090740	zmp:0000001003	100	57.604	ENSDARG00000115737	AL954741.2	99	57.604
ENSDARG00000090740	zmp:0000001003	100	47.436	ENSDARG00000104904	si:ch73-221f6.1	61	47.436
ENSDARG00000090740	zmp:0000001003	100	72.321	ENSDARG00000077712	zgc:113886	98	72.321
ENSDARG00000090740	zmp:0000001003	100	56.769	ENSDARG00000104065	znf1154	89	56.769
ENSDARG00000090740	zmp:0000001003	99	71.707	ENSDARG00000103777	znf1001	99	71.707
ENSDARG00000090740	zmp:0000001003	100	60.606	ENSDARG00000088507	znf982	77	65.854
ENSDARG00000090740	zmp:0000001003	100	58.537	ENSDARG00000094736	znf1157	86	58.537
ENSDARG00000090740	zmp:0000001003	100	67.480	ENSDARG00000098248	CABZ01081730.1	88	67.480
ENSDARG00000090740	zmp:0000001003	100	65.041	ENSDARG00000091679	FO704858.1	96	65.041
ENSDARG00000090740	zmp:0000001003	91	61.644	ENSDARG00000078814	si:dkey-34m19.3	76	61.644
ENSDARG00000090740	zmp:0000001003	92	69.163	ENSDARG00000103530	zgc:113102	91	69.163
ENSDARG00000090740	zmp:0000001003	100	49.780	ENSDARG00000015482	zgc:113518	75	49.780
ENSDARG00000090740	zmp:0000001003	100	66.964	ENSDARG00000109703	FO834825.1	82	66.964
ENSDARG00000090740	zmp:0000001003	100	54.545	ENSDARG00000092605	znf1003	78	54.545
ENSDARG00000090740	zmp:0000001003	100	67.890	ENSDARG00000099917	znf1005	95	67.890
ENSDARG00000090740	zmp:0000001003	100	61.633	ENSDARG00000053165	zgc:113377	80	61.633
ENSDARG00000090740	zmp:0000001003	100	65.198	ENSDARG00000099172	BX000701.1	92	65.198
ENSDARG00000090740	zmp:0000001003	100	58.367	ENSDARG00000098021	si:dkey-111k8.2	85	56.735
ENSDARG00000090740	zmp:0000001003	100	65.854	ENSDARG00000100587	zgc:113886	90	65.823
ENSDARG00000090740	zmp:0000001003	100	69.106	ENSDARG00000100803	zgc:173517	90	69.106
ENSDARG00000090740	zmp:0000001003	100	69.231	ENSDARG00000102401	znf1001	93	69.231
ENSDARG00000090740	zmp:0000001003	100	70.325	ENSDARG00000099731	CABZ01066719.1	92	70.325
ENSDARG00000090740	zmp:0000001003	100	57.277	ENSDARG00000073821	znf1177	82	54.585
ENSDARG00000090740	zmp:0000001003	100	57.205	ENSDARG00000100361	znf1174	72	57.205
ENSDARG00000090740	zmp:0000001003	100	66.667	ENSDARG00000105056	znf45l	81	66.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000090740	zmp:0000001003	100	48.815	ENSACIG00000009809	si:dkey-77f5.14	78	48.815	Amphilophus_citrinellus
ENSDARG00000090740	zmp:0000001003	100	50.820	ENSACLG00000020260	-	99	50.820	Astatotilapia_calliptera
ENSDARG00000090740	zmp:0000001003	100	45.992	ENSACLG00000020339	-	62	45.992	Astatotilapia_calliptera
ENSDARG00000090740	zmp:0000001003	100	44.292	ENSAMXG00000041862	-	95	44.292	Astyanax_mexicanus
ENSDARG00000090740	zmp:0000001003	100	44.340	ENSCVAG00000004382	-	87	44.340	Cyprinodon_variegatus
ENSDARG00000090740	zmp:0000001003	100	51.055	ENSEBUG00000013528	-	78	51.055	Eptatretus_burgeri
ENSDARG00000090740	zmp:0000001003	100	45.714	ENSEBUG00000001219	-	71	45.714	Eptatretus_burgeri
ENSDARG00000090740	zmp:0000001003	100	50.000	ENSFHEG00000005973	-	90	50.000	Fundulus_heteroclitus
ENSDARG00000090740	zmp:0000001003	100	46.535	ENSFHEG00000015748	-	99	46.535	Fundulus_heteroclitus
ENSDARG00000090740	zmp:0000001003	100	49.761	ENSGMOG00000020149	si:dkeyp-113d7.1	100	49.761	Gadus_morhua
ENSDARG00000090740	zmp:0000001003	100	48.815	ENSHBUG00000002533	-	51	48.815	Haplochromis_burtoni
ENSDARG00000090740	zmp:0000001003	100	48.387	ENSHBUG00000022063	-	63	48.387	Haplochromis_burtoni
ENSDARG00000090740	zmp:0000001003	100	53.623	ENSKMAG00000002583	-	88	46.789	Kryptolebias_marmoratus
ENSDARG00000090740	zmp:0000001003	100	47.030	ENSKMAG00000018656	si:dkey-77f5.14	99	47.030	Kryptolebias_marmoratus
ENSDARG00000090740	zmp:0000001003	100	45.249	ENSLOCG00000004661	-	99	45.249	Lepisosteus_oculatus
ENSDARG00000090740	zmp:0000001003	100	49.655	ENSMZEG00005010521	-	92	45.382	Maylandia_zebra
ENSDARG00000090740	zmp:0000001003	100	48.544	ENSMMOG00000005446	-	81	48.544	Mola_mola
ENSDARG00000090740	zmp:0000001003	100	49.160	ENSNBRG00000024054	-	58	49.160	Neolamprologus_brichardi
ENSDARG00000090740	zmp:0000001003	100	53.608	ENSORLG00000029343	-	72	43.956	Oryzias_latipes
ENSDARG00000090740	zmp:0000001003	99	50.000	ENSORLG00020016754	-	88	47.312	Oryzias_latipes_hni
ENSDARG00000090740	zmp:0000001003	100	49.727	ENSOMEG00000023820	-	85	49.524	Oryzias_melastigma
ENSDARG00000090740	zmp:0000001003	100	50.233	ENSPMEG00000022786	si:dkey-77f5.14	70	50.233	Poecilia_mexicana
ENSDARG00000090740	zmp:0000001003	99	60.938	ENSPMEG00000023866	-	90	60.938	Poecilia_mexicana
ENSDARG00000090740	zmp:0000001003	97	63.492	ENSPMEG00000023840	-	99	63.492	Poecilia_mexicana
ENSDARG00000090740	zmp:0000001003	100	38.380	ENSPREG00000019990	-	87	38.596	Poecilia_reticulata
ENSDARG00000090740	zmp:0000001003	100	49.718	ENSPNAG00000007266	-	100	49.718	Pygocentrus_nattereri
ENSDARG00000090740	zmp:0000001003	100	44.162	ENSXMAG00000026601	-	81	44.162	Xiphophorus_maculatus