EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000091198 (Gene tree)
Gene ID: 558120
Gene Symbol: urm1
Alias: si:dkeyp-68f6.2
Full Name: ubiquitin related modifier 1
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 13002 bases
Position: chr10:10313024-10326025
Accession: ZDB-GENE-091204-300
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000120675	Urm1	PF09138.11	1.4e-38	1	1
ENSDARP00000108653	Urm1	PF09138.11	1.4e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000142895	-	962	-	ENSDARP00000120675	101 (aa)	-	F2Z4T6
ENSDART00000129952	-	858	XM_021479180	ENSDARP00000108653	100 (aa)	XP_021334855	E7F6T4

Gene Model

Click here to download ENSDARG00000091198's gene model file

Pathways

Pathway ID	Pathway Name	Source
dre04122	Sulfur relay system	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000091198's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000091198	urm1	100	77.228	ENSG00000167118	URM1	100	77.228	Homo_sapiens
ENSDARG00000091198	urm1	100	84.158	ENSAPOG00000009382	urm1	100	84.158	Acanthochromis_polyacanthus
ENSDARG00000091198	urm1	100	76.238	ENSAMEG00000015446	URM1	100	76.238	Ailuropoda_melanoleuca
ENSDARG00000091198	urm1	100	64.078	ENSACIG00000005345	urm1	100	64.078	Amphilophus_citrinellus
ENSDARG00000091198	urm1	100	85.149	ENSAPEG00000007448	urm1	100	85.149	Amphiprion_percula
ENSDARG00000091198	urm1	100	83.168	ENSATEG00000019659	urm1	100	83.168	Anabas_testudineus
ENSDARG00000091198	urm1	90	80.220	ENSAPLG00000008603	URM1	100	80.220	Anas_platyrhynchos
ENSDARG00000091198	urm1	100	79.208	ENSACAG00000010428	-	100	79.208	Anolis_carolinensis
ENSDARG00000091198	urm1	100	77.228	ENSANAG00000036717	URM1	100	77.228	Aotus_nancymaae
ENSDARG00000091198	urm1	100	85.149	ENSACLG00000022484	urm1	100	85.149	Astatotilapia_calliptera
ENSDARG00000091198	urm1	89	73.333	ENSAMXG00000042562	urm1	89	73.333	Astyanax_mexicanus
ENSDARG00000091198	urm1	100	77.228	ENSBTAG00000025612	URM1	100	77.228	Bos_taurus
ENSDARG00000091198	urm1	98	32.039	WBGene00185048	urm-1	99	32.039	Caenorhabditis_elegans
ENSDARG00000091198	urm1	100	78.218	ENSCJAG00000020036	URM1	100	78.218	Callithrix_jacchus
ENSDARG00000091198	urm1	100	76.238	ENSCAFG00000023618	URM1	100	76.238	Canis_familiaris
ENSDARG00000091198	urm1	98	62.000	ENSCHIG00000012547	-	99	62.000	Capra_hircus
ENSDARG00000091198	urm1	100	74.257	ENSTSYG00000028376	URM1	100	74.257	Carlito_syrichta
ENSDARG00000091198	urm1	64	80.000	ENSCAPG00000002189	-	100	80.000	Cavia_aperea
ENSDARG00000091198	urm1	100	78.218	ENSCPOG00000039069	URM1	100	78.218	Cavia_porcellus
ENSDARG00000091198	urm1	100	78.218	ENSCCAG00000032510	URM1	100	78.218	Cebus_capucinus
ENSDARG00000091198	urm1	100	77.228	ENSCATG00000033068	URM1	100	77.228	Cercocebus_atys
ENSDARG00000091198	urm1	100	78.218	ENSCLAG00000001791	URM1	100	78.218	Chinchilla_lanigera
ENSDARG00000091198	urm1	78	74.684	ENSCSAG00000014200	URM1	54	74.684	Chlorocebus_sabaeus
ENSDARG00000091198	urm1	100	81.188	ENSCPBG00000025196	URM1	100	81.188	Chrysemys_picta_bellii
ENSDARG00000091198	urm1	100	77.228	ENSCANG00000012760	URM1	100	77.228	Colobus_angolensis_palliatus
ENSDARG00000091198	urm1	100	75.248	ENSCGRG00001023888	Urm1	100	75.248	Cricetulus_griseus_chok1gshd
ENSDARG00000091198	urm1	100	75.248	ENSCGRG00000005358	Urm1	100	75.248	Cricetulus_griseus_crigri
ENSDARG00000091198	urm1	100	80.198	ENSCSEG00000016193	urm1	100	80.198	Cynoglossus_semilaevis
ENSDARG00000091198	urm1	84	71.591	ENSCVAG00000011864	urm1	77	71.591	Cyprinodon_variegatus
ENSDARG00000091198	urm1	79	75.000	ENSDNOG00000039086	URM1	56	74.684	Dasypus_novemcinctus
ENSDARG00000091198	urm1	100	74.257	ENSDORG00000028424	Urm1	100	74.257	Dipodomys_ordii
ENSDARG00000091198	urm1	100	62.745	FBgn0053276	Urm1	100	62.745	Drosophila_melanogaster
ENSDARG00000091198	urm1	100	75.248	ENSETEG00000000039	-	100	75.248	Echinops_telfairi
ENSDARG00000091198	urm1	64	78.462	ENSEASG00005016204	-	60	78.462	Equus_asinus_asinus
ENSDARG00000091198	urm1	100	73.267	ENSEEUG00000012945	URM1	100	73.267	Erinaceus_europaeus
ENSDARG00000091198	urm1	100	88.119	ENSELUG00000006757	URM1	100	88.119	Esox_lucius
ENSDARG00000091198	urm1	100	76.238	ENSFCAG00000005842	URM1	100	76.238	Felis_catus
ENSDARG00000091198	urm1	90	79.121	ENSFALG00000001360	URM1	100	79.121	Ficedula_albicollis
ENSDARG00000091198	urm1	100	78.218	ENSFDAG00000013113	URM1	100	78.218	Fukomys_damarensis
ENSDARG00000091198	urm1	100	85.149	ENSGMOG00000006245	urm1	100	85.149	Gadus_morhua
ENSDARG00000091198	urm1	100	79.208	ENSGALG00000004971	URM1	100	79.208	Gallus_gallus
ENSDARG00000091198	urm1	100	86.139	ENSGAFG00000007518	urm1	100	86.139	Gambusia_affinis
ENSDARG00000091198	urm1	100	83.168	ENSGACG00000017389	urm1	100	83.168	Gasterosteus_aculeatus
ENSDARG00000091198	urm1	100	81.188	ENSGAGG00000022865	URM1	100	81.188	Gopherus_agassizii
ENSDARG00000091198	urm1	100	77.228	ENSGGOG00000014806	URM1	100	77.228	Gorilla_gorilla
ENSDARG00000091198	urm1	100	84.158	ENSHBUG00000001440	urm1	100	84.158	Haplochromis_burtoni
ENSDARG00000091198	urm1	100	76.238	ENSHGLG00000016662	URM1	100	76.238	Heterocephalus_glaber_female
ENSDARG00000091198	urm1	100	76.238	ENSHGLG00100019392	URM1	100	76.238	Heterocephalus_glaber_male
ENSDARG00000091198	urm1	100	82.178	ENSHCOG00000002828	urm1	100	82.178	Hippocampus_comes
ENSDARG00000091198	urm1	100	83.168	ENSIPUG00000020621	urm1	55	83.168	Ictalurus_punctatus
ENSDARG00000091198	urm1	100	78.218	ENSSTOG00000025351	URM1	100	78.218	Ictidomys_tridecemlineatus
ENSDARG00000091198	urm1	100	68.317	ENSJJAG00000011074	-	100	68.317	Jaculus_jaculus
ENSDARG00000091198	urm1	100	75.248	ENSJJAG00000014799	-	100	75.248	Jaculus_jaculus
ENSDARG00000091198	urm1	100	86.139	ENSKMAG00000011433	urm1	100	86.139	Kryptolebias_marmoratus
ENSDARG00000091198	urm1	99	70.000	ENSLBEG00000004555	urm1	85	70.000	Labrus_bergylta
ENSDARG00000091198	urm1	100	80.198	ENSLACG00000016968	URM1	100	80.198	Latimeria_chalumnae
ENSDARG00000091198	urm1	100	87.129	ENSLOCG00000002768	urm1	100	87.129	Lepisosteus_oculatus
ENSDARG00000091198	urm1	100	75.728	ENSLAFG00000002178	URM1	100	75.728	Loxodonta_africana
ENSDARG00000091198	urm1	100	77.228	ENSMFAG00000035214	URM1	100	77.228	Macaca_fascicularis
ENSDARG00000091198	urm1	97	73.469	ENSMMUG00000018612	URM1	99	73.469	Macaca_mulatta
ENSDARG00000091198	urm1	100	77.228	ENSMLEG00000028542	URM1	100	77.228	Mandrillus_leucophaeus
ENSDARG00000091198	urm1	100	85.149	ENSMAMG00000008703	urm1	100	85.149	Mastacembelus_armatus
ENSDARG00000091198	urm1	100	85.149	ENSMZEG00005017191	urm1	100	85.149	Maylandia_zebra
ENSDARG00000091198	urm1	90	80.220	ENSMGAG00000003812	URM1	100	80.220	Meleagris_gallopavo
ENSDARG00000091198	urm1	100	74.257	ENSMAUG00000000479	Urm1	100	74.257	Mesocricetus_auratus
ENSDARG00000091198	urm1	100	79.208	ENSMICG00000042967	URM1	100	79.208	Microcebus_murinus
ENSDARG00000091198	urm1	100	75.248	ENSMOCG00000007365	Urm1	100	75.248	Microtus_ochrogaster
ENSDARG00000091198	urm1	100	83.168	ENSMMOG00000021296	urm1	100	83.168	Mola_mola
ENSDARG00000091198	urm1	100	77.228	ENSMODG00000023353	URM1	100	77.228	Monodelphis_domestica
ENSDARG00000091198	urm1	100	84.158	ENSMALG00000018227	urm1	100	84.158	Monopterus_albus
ENSDARG00000091198	urm1	100	76.238	MGP_CAROLIEiJ_G0023372	Urm1	100	76.238	Mus_caroli
ENSDARG00000091198	urm1	100	76.238	ENSMUSG00000069020	Urm1	100	76.238	Mus_musculus
ENSDARG00000091198	urm1	100	77.228	MGP_PahariEiJ_G0024829	Urm1	100	77.228	Mus_pahari
ENSDARG00000091198	urm1	100	77.228	MGP_SPRETEiJ_G0024289	Urm1	100	77.228	Mus_spretus
ENSDARG00000091198	urm1	100	76.238	ENSMPUG00000013184	URM1	100	76.238	Mustela_putorius_furo
ENSDARG00000091198	urm1	78	75.949	ENSMLUG00000007275	URM1	100	75.949	Myotis_lucifugus
ENSDARG00000091198	urm1	100	77.228	ENSNGAG00000007112	Urm1	100	77.228	Nannospalax_galili
ENSDARG00000091198	urm1	100	84.158	ENSNBRG00000009012	urm1	100	84.158	Neolamprologus_brichardi
ENSDARG00000091198	urm1	100	77.228	ENSNLEG00000031211	URM1	100	77.228	Nomascus_leucogenys
ENSDARG00000091198	urm1	100	78.218	ENSMEUG00000014147	-	100	78.218	Notamacropus_eugenii
ENSDARG00000091198	urm1	100	78.218	ENSOPRG00000002058	URM1	100	78.218	Ochotona_princeps
ENSDARG00000091198	urm1	100	76.238	ENSODEG00000017296	URM1	100	76.238	Octodon_degus
ENSDARG00000091198	urm1	100	84.158	ENSONIG00000003910	urm1	100	84.158	Oreochromis_niloticus
ENSDARG00000091198	urm1	96	73.196	ENSOANG00000003949	-	100	73.196	Ornithorhynchus_anatinus
ENSDARG00000091198	urm1	97	76.531	ENSOCUG00000008848	URM1	100	76.531	Oryctolagus_cuniculus
ENSDARG00000091198	urm1	100	84.158	ENSORLG00000024432	urm1	100	84.158	Oryzias_latipes
ENSDARG00000091198	urm1	100	83.168	ENSORLG00020000333	urm1	100	83.168	Oryzias_latipes_hni
ENSDARG00000091198	urm1	92	80.645	ENSORLG00015001370	urm1	68	80.645	Oryzias_latipes_hsok
ENSDARG00000091198	urm1	100	84.158	ENSOMEG00000023257	urm1	100	84.158	Oryzias_melastigma
ENSDARG00000091198	urm1	100	77.228	ENSOGAG00000001445	URM1	100	77.228	Otolemur_garnettii
ENSDARG00000091198	urm1	100	77.228	ENSOARG00000010218	URM1	100	77.228	Ovis_aries
ENSDARG00000091198	urm1	100	77.228	ENSPPAG00000030946	URM1	100	77.228	Pan_paniscus
ENSDARG00000091198	urm1	100	75.248	ENSPPRG00000008861	URM1	100	75.248	Panthera_pardus
ENSDARG00000091198	urm1	100	74.257	ENSPTIG00000012500	URM1	100	74.257	Panthera_tigris_altaica
ENSDARG00000091198	urm1	100	77.228	ENSPTRG00000021427	URM1	100	77.228	Pan_troglodytes
ENSDARG00000091198	urm1	100	77.228	ENSPANG00000025883	URM1	100	77.228	Papio_anubis
ENSDARG00000091198	urm1	100	83.168	ENSPKIG00000021455	urm1	100	83.168	Paramormyrops_kingsleyae
ENSDARG00000091198	urm1	100	79.208	ENSPSIG00000014442	URM1	100	79.208	Pelodiscus_sinensis
ENSDARG00000091198	urm1	78	82.278	ENSPMGG00000023974	urm1	67	82.278	Periophthalmus_magnuspinnatus
ENSDARG00000091198	urm1	100	75.248	ENSPMAG00000007668	urm1	100	75.248	Petromyzon_marinus
ENSDARG00000091198	urm1	87	78.409	ENSPCIG00000026786	-	84	78.409	Phascolarctos_cinereus
ENSDARG00000091198	urm1	100	86.139	ENSPFOG00000019694	urm1	100	86.139	Poecilia_formosa
ENSDARG00000091198	urm1	100	86.139	ENSPLAG00000021729	urm1	100	86.139	Poecilia_latipinna
ENSDARG00000091198	urm1	100	86.139	ENSPMEG00000009764	urm1	100	86.139	Poecilia_mexicana
ENSDARG00000091198	urm1	100	86.139	ENSPREG00000008611	urm1	100	86.139	Poecilia_reticulata
ENSDARG00000091198	urm1	100	77.228	ENSPPYG00000019649	-	100	77.228	Pongo_abelii
ENSDARG00000091198	urm1	78	74.684	ENSPCAG00000015239	URM1	100	74.684	Procavia_capensis
ENSDARG00000091198	urm1	100	79.208	ENSPCOG00000021449	URM1	100	79.208	Propithecus_coquereli
ENSDARG00000091198	urm1	100	77.228	ENSPVAG00000001227	URM1	100	77.228	Pteropus_vampyrus
ENSDARG00000091198	urm1	100	85.149	ENSPNYG00000012446	urm1	100	85.149	Pundamilia_nyererei
ENSDARG00000091198	urm1	100	91.089	ENSPNAG00000017145	urm1	100	91.089	Pygocentrus_nattereri
ENSDARG00000091198	urm1	100	77.228	ENSRNOG00000026636	Urm1	100	77.228	Rattus_norvegicus
ENSDARG00000091198	urm1	100	77.228	ENSRBIG00000041054	URM1	100	77.228	Rhinopithecus_bieti
ENSDARG00000091198	urm1	100	77.228	ENSRROG00000038638	URM1	100	77.228	Rhinopithecus_roxellana
ENSDARG00000091198	urm1	96	39.394	YIL008W	-	99	39.394	Saccharomyces_cerevisiae
ENSDARG00000091198	urm1	100	78.218	ENSSBOG00000030293	URM1	100	78.218	Saimiri_boliviensis_boliviensis
ENSDARG00000091198	urm1	100	87.129	ENSSFOG00015000673	urm1	56	87.129	Scleropages_formosus
ENSDARG00000091198	urm1	100	84.158	ENSSMAG00000019927	urm1	100	84.158	Scophthalmus_maximus
ENSDARG00000091198	urm1	100	86.139	ENSSDUG00000000566	urm1	100	86.139	Seriola_dumerili
ENSDARG00000091198	urm1	100	86.139	ENSSLDG00000012250	urm1	100	86.139	Seriola_lalandi_dorsalis
ENSDARG00000091198	urm1	100	77.228	ENSSPUG00000015548	URM1	100	77.228	Sphenodon_punctatus
ENSDARG00000091198	urm1	100	85.149	ENSSPAG00000001097	urm1	100	85.149	Stegastes_partitus
ENSDARG00000091198	urm1	100	77.228	ENSSSCG00000005649	URM1	100	77.228	Sus_scrofa
ENSDARG00000091198	urm1	90	78.022	ENSTGUG00000003654	URM1	100	78.022	Taeniopygia_guttata
ENSDARG00000091198	urm1	100	83.168	ENSTRUG00000008530	urm1	100	83.168	Takifugu_rubripes
ENSDARG00000091198	urm1	100	82.353	ENSTNIG00000013204	urm1	100	82.353	Tetraodon_nigroviridis
ENSDARG00000091198	urm1	100	59.406	ENSTBEG00000002675	-	100	59.406	Tupaia_belangeri
ENSDARG00000091198	urm1	100	74.257	ENSTTRG00000016490	URM1	100	74.257	Tursiops_truncatus
ENSDARG00000091198	urm1	100	75.248	ENSUAMG00000020279	URM1	100	75.248	Ursus_americanus
ENSDARG00000091198	urm1	78	72.152	ENSUMAG00000022029	-	78	72.152	Ursus_maritimus
ENSDARG00000091198	urm1	64	87.692	ENSXCOG00000004982	urm1	80	87.692	Xiphophorus_couchianus
ENSDARG00000091198	urm1	100	86.139	ENSXMAG00000001680	urm1	100	86.139	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0002098	tRNA wobble uridine modification	-	IEA	Process
GO:0005737	cytoplasm	-	IEA	Component
GO:0005829	cytosol	-	IEA	Component
GO:0008033	tRNA processing	-	IEA	Process
GO:0032447	protein urmylation	-	IEA	Process
GO:0034227	tRNA thio-modification	-	IEA	Process