EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000091851 (Gene tree)
Gene ID: 767713
Gene Symbol: tsen2
Alias: zgc:154067
Full Name: TSEN2 tRNA splicing endonuclease subunit
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 8489 bases
Position: chr11:588017-596505
Accession: ZDB-GENE-060929-918
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000095278	tRNA_int_endo	PF01974.17	4.8e-19	1	1
ENSDARP00000095278	tRNA_int_endo_N	PF02778.14	1.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000104505	-	769	-	ENSDARP00000095278	187 (aa)	-	F1QLQ4

Gene Model

Click here to download ENSDARG00000091851's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000091851's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000091851	tsen2	99	63.441	ENSG00000154743	TSEN2	98	56.962	Homo_sapiens
ENSDARG00000091851	tsen2	98	63.243	ENSACIG00000022861	tsen2	99	58.046	Amphilophus_citrinellus
ENSDARG00000091851	tsen2	99	63.978	ENSCJAG00000039013	TSEN2	57	63.978	Callithrix_jacchus
ENSDARG00000091851	tsen2	66	46.154	ENSCING00000013311	-	93	46.154	Ciona_intestinalis
ENSDARG00000091851	tsen2	78	67.347	ENSCVAG00000014431	tsen2	99	67.347	Cyprinodon_variegatus
ENSDARG00000091851	tsen2	98	54.595	ENSEBUG00000014614	TSEN2	51	54.595	Eptatretus_burgeri
ENSDARG00000091851	tsen2	94	55.682	ENSGMOG00000000443	-	68	55.682	Gadus_morhua
ENSDARG00000091851	tsen2	96	64.088	ENSHCOG00000014632	-	64	64.088	Hippocampus_comes
ENSDARG00000091851	tsen2	96	67.403	ENSMZEG00005012081	-	65	67.403	Maylandia_zebra
ENSDARG00000091851	tsen2	91	60.920	ENSNBRG00000007105	tsen2	99	60.920	Neolamprologus_brichardi
ENSDARG00000091851	tsen2	98	61.413	ENSXETG00000025146	tsen2	51	61.413	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000213	tRNA-intron endonuclease activity	21873635.	IBA	Function
GO:0000213	tRNA-intron endonuclease activity	-	IEA	Function
GO:0000214	tRNA-intron endonuclease complex	21873635.	IBA	Component
GO:0000214	tRNA-intron endonuclease complex	-	IEA	Component
GO:0000379	tRNA-type intron splice site recognition and cleavage	21873635.	IBA	Process
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0004518	nuclease activity	-	IEA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0006388	tRNA splicing, via endonucleolytic cleavage and ligation	-	IEA	Process
GO:0008033	tRNA processing	-	IEA	Process
GO:0016829	lyase activity	-	IEA	Function