EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000091931 (Gene tree)
Gene ID: 555692
Gene Symbol: gpatch4
Alias: im:7138553|si:dkey-202i12.4
Full Name: G patch domain containing 4
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 5383 bases
Position: chr16:29025292-29030674
Accession: ZDB-GENE-041008-158
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000124386	G-patch	PF01585.23	8.8e-09	1	1
ENSDARP00000124189	G-patch	PF01585.23	1.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000149454	-	438	-	-	- (aa)	-	-
ENSDART00000150184	-	2172	XM_021466691	ENSDARP00000124189	438 (aa)	XP_021322366	F8W4H1
ENSDART00000148976	-	2152	-	-	- (aa)	-	-
ENSDART00000148865	-	767	-	ENSDARP00000124386	192 (aa)	-	F8W3J6

Gene Model

Click here to download ENSDARG00000091931's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000091931's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000091931	gpatch4	78	45.638	ENSG00000160818	GPATCH4	98	46.400	Homo_sapiens
ENSDARG00000091931	gpatch4	82	75.316	ENSAPOG00000008436	gpatch4	52	77.404	Acanthochromis_polyacanthus
ENSDARG00000091931	gpatch4	59	67.257	ENSACIG00000017309	-	91	67.568	Amphilophus_citrinellus
ENSDARG00000091931	gpatch4	82	76.250	ENSAOCG00000015494	gpatch4	53	77.619	Amphiprion_ocellaris
ENSDARG00000091931	gpatch4	82	75.949	ENSACLG00000010456	gpatch4	51	86.905	Astatotilapia_calliptera
ENSDARG00000091931	gpatch4	98	69.149	ENSAMXG00000034049	gpatch4	100	69.149	Astyanax_mexicanus
ENSDARG00000091931	gpatch4	69	47.761	ENSCJAG00000006048	GPATCH4	91	46.218	Callithrix_jacchus
ENSDARG00000091931	gpatch4	66	43.307	ENSCJAG00000001883	-	96	43.307	Callithrix_jacchus
ENSDARG00000091931	gpatch4	67	45.736	ENSCJAG00000031662	-	84	45.736	Callithrix_jacchus
ENSDARG00000091931	gpatch4	63	46.667	ENSCAFG00020005274	-	87	47.059	Canis_lupus_dingo
ENSDARG00000091931	gpatch4	65	45.600	ENSCAFG00020006707	-	95	45.600	Canis_lupus_dingo
ENSDARG00000091931	gpatch4	75	43.750	ENSTSYG00000026904	-	78	47.899	Carlito_syrichta
ENSDARG00000091931	gpatch4	61	45.763	ENSCPOG00000013701	-	92	45.763	Cavia_porcellus
ENSDARG00000091931	gpatch4	71	45.985	ENSCCAG00000036114	GPATCH4	91	46.218	Cebus_capucinus
ENSDARG00000091931	gpatch4	78	44.966	ENSCATG00000042152	GPATCH4	78	46.218	Cercocebus_atys
ENSDARG00000091931	gpatch4	82	58.228	ENSCPBG00000025803	GPATCH4	65	61.765	Chrysemys_picta_bellii
ENSDARG00000091931	gpatch4	70	47.015	ENSCING00000004717	-	68	45.304	Ciona_intestinalis
ENSDARG00000091931	gpatch4	56	43.519	ENSCSAVG00000003297	-	64	44.886	Ciona_savignyi
ENSDARG00000091931	gpatch4	78	45.638	ENSCANG00000030031	GPATCH4	78	47.059	Colobus_angolensis_palliatus
ENSDARG00000091931	gpatch4	84	58.025	ENSCSEG00000012030	gpatch4	60	61.611	Cynoglossus_semilaevis
ENSDARG00000091931	gpatch4	76	45.517	ENSDORG00000011332	-	75	48.739	Dipodomys_ordii
ENSDARG00000091931	gpatch4	56	31.579	ENSEBUG00000006498	-	55	36.872	Eptatretus_burgeri
ENSDARG00000091931	gpatch4	78	44.966	ENSECAG00000011135	GPATCH4	54	46.465	Equus_caballus
ENSDARG00000091931	gpatch4	82	74.843	ENSFHEG00000003097	gpatch4	55	75.943	Fundulus_heteroclitus
ENSDARG00000091931	gpatch4	81	45.860	ENSGALG00000048365	GPATCH4	51	54.255	Gallus_gallus
ENSDARG00000091931	gpatch4	82	71.519	ENSGAFG00000021732	gpatch4	67	73.810	Gambusia_affinis
ENSDARG00000091931	gpatch4	82	71.250	ENSGACG00000013318	gpatch4	68	69.737	Gasterosteus_aculeatus
ENSDARG00000091931	gpatch4	82	57.233	ENSGAGG00000020710	GPATCH4	63	64.796	Gopherus_agassizii
ENSDARG00000091931	gpatch4	74	46.479	ENSGGOG00000000753	GPATCH4	78	46.218	Gorilla_gorilla
ENSDARG00000091931	gpatch4	82	76.582	ENSHBUG00000009675	gpatch4	50	86.905	Haplochromis_burtoni
ENSDARG00000091931	gpatch4	65	44.000	ENSHGLG00000011346	-	88	45.378	Heterocephalus_glaber_female
ENSDARG00000091931	gpatch4	65	44.000	ENSHGLG00100018277	-	81	44.000	Heterocephalus_glaber_male
ENSDARG00000091931	gpatch4	82	66.456	ENSHCOG00000007016	gpatch4	57	69.118	Hippocampus_comes
ENSDARG00000091931	gpatch4	83	71.250	ENSIPUG00000006348	gpatch4	68	67.143	Ictalurus_punctatus
ENSDARG00000091931	gpatch4	73	48.592	ENSSTOG00000020510	GPATCH4	89	48.800	Ictidomys_tridecemlineatus
ENSDARG00000091931	gpatch4	84	74.390	ENSKMAG00000015765	gpatch4	57	75.701	Kryptolebias_marmoratus
ENSDARG00000091931	gpatch4	81	73.125	ENSLBEG00000016296	gpatch4	92	49.286	Labrus_bergylta
ENSDARG00000091931	gpatch4	81	73.125	ENSLBEG00000009364	-	61	71.707	Labrus_bergylta
ENSDARG00000091931	gpatch4	82	57.595	ENSLACG00000009700	GPATCH4	57	62.562	Latimeria_chalumnae
ENSDARG00000091931	gpatch4	82	57.317	ENSLOCG00000008820	gpatch4	59	62.857	Lepisosteus_oculatus
ENSDARG00000091931	gpatch4	74	45.070	ENSMFAG00000030965	GPATCH4	78	45.378	Macaca_fascicularis
ENSDARG00000091931	gpatch4	78	44.966	ENSMMUG00000002624	GPATCH4	78	46.218	Macaca_mulatta
ENSDARG00000091931	gpatch4	74	45.775	ENSMNEG00000028844	GPATCH4	78	46.218	Macaca_nemestrina
ENSDARG00000091931	gpatch4	74	45.070	ENSMLEG00000037909	GPATCH4	78	45.378	Mandrillus_leucophaeus
ENSDARG00000091931	gpatch4	81	74.684	ENSMAMG00000010151	gpatch4	52	73.303	Mastacembelus_armatus
ENSDARG00000091931	gpatch4	82	75.949	ENSMZEG00005017452	gpatch4	54	77.404	Maylandia_zebra
ENSDARG00000091931	gpatch4	70	41.045	ENSMAUG00000008406	-	92	44.538	Mesocricetus_auratus
ENSDARG00000091931	gpatch4	78	40.667	ENSMICG00000034025	-	93	42.017	Microcebus_murinus
ENSDARG00000091931	gpatch4	65	40.800	ENSMICG00000038615	-	88	39.815	Microcebus_murinus
ENSDARG00000091931	gpatch4	62	44.538	ENSMOCG00000008875	-	97	44.538	Microtus_ochrogaster
ENSDARG00000091931	gpatch4	82	76.101	ENSMMOG00000017095	gpatch4	76	81.707	Mola_mola
ENSDARG00000091931	gpatch4	70	50.735	ENSMODG00000014154	-	92	49.010	Monodelphis_domestica
ENSDARG00000091931	gpatch4	77	50.676	ENSMODG00000016818	-	66	49.505	Monodelphis_domestica
ENSDARG00000091931	gpatch4	82	72.500	ENSMALG00000003793	gpatch4	50	75.117	Monopterus_albus
ENSDARG00000091931	gpatch4	69	47.727	MGP_CAROLIEiJ_G0025152	Gpatch4	77	46.269	Mus_caroli
ENSDARG00000091931	gpatch4	69	47.727	ENSMUSG00000028069	Gpatch4	76	46.465	Mus_musculus
ENSDARG00000091931	gpatch4	69	47.727	MGP_PahariEiJ_G0026595	-	77	46.269	Mus_pahari
ENSDARG00000091931	gpatch4	69	47.727	MGP_SPRETEiJ_G0026093	Gpatch4	77	45.771	Mus_spretus
ENSDARG00000091931	gpatch4	62	43.697	ENSNGAG00000019958	-	92	42.308	Nannospalax_galili
ENSDARG00000091931	gpatch4	62	46.667	ENSMEUG00000006861	-	68	42.574	Notamacropus_eugenii
ENSDARG00000091931	gpatch4	65	45.600	ENSODEG00000010437	-	98	45.600	Octodon_degus
ENSDARG00000091931	gpatch4	82	77.215	ENSONIG00000002261	gpatch4	53	78.365	Oreochromis_niloticus
ENSDARG00000091931	gpatch4	80	69.872	ENSORLG00020013892	gpatch4	56	73.267	Oryzias_latipes_hni
ENSDARG00000091931	gpatch4	80	69.231	ENSORLG00015019725	gpatch4	56	72.772	Oryzias_latipes_hsok
ENSDARG00000091931	gpatch4	61	44.964	ENSOMEG00000000529	gpatch4	75	44.964	Oryzias_melastigma
ENSDARG00000091931	gpatch4	74	46.479	ENSPPAG00000028364	-	78	46.218	Pan_paniscus
ENSDARG00000091931	gpatch4	74	48.276	ENSPTIG00000006717	GPATCH4	84	45.600	Panthera_tigris_altaica
ENSDARG00000091931	gpatch4	74	46.479	ENSPTRG00000001464	GPATCH4	78	46.218	Pan_troglodytes
ENSDARG00000091931	gpatch4	74	45.775	ENSPANG00000018543	GPATCH4	78	46.218	Papio_anubis
ENSDARG00000091931	gpatch4	82	60.759	ENSPSIG00000011317	GPATCH4	74	60.648	Pelodiscus_sinensis
ENSDARG00000091931	gpatch4	65	69.600	ENSPMGG00000019375	-	87	69.600	Periophthalmus_magnuspinnatus
ENSDARG00000091931	gpatch4	84	53.892	ENSPMAG00000009175	gpatch4	73	56.279	Petromyzon_marinus
ENSDARG00000091931	gpatch4	82	71.429	ENSPFOG00000011835	gpatch4	54	74.408	Poecilia_formosa
ENSDARG00000091931	gpatch4	82	70.807	ENSPLAG00000019504	gpatch4	54	73.934	Poecilia_latipinna
ENSDARG00000091931	gpatch4	82	71.429	ENSPMEG00000001375	gpatch4	55	74.408	Poecilia_mexicana
ENSDARG00000091931	gpatch4	82	70.186	ENSPREG00000017029	gpatch4	57	73.460	Poecilia_reticulata
ENSDARG00000091931	gpatch4	78	37.333	ENSPCOG00000013948	-	87	39.394	Propithecus_coquereli
ENSDARG00000091931	gpatch4	69	46.212	ENSPCOG00000023130	-	76	46.218	Propithecus_coquereli
ENSDARG00000091931	gpatch4	82	76.582	ENSPNYG00000018461	gpatch4	53	77.885	Pundamilia_nyererei
ENSDARG00000091931	gpatch4	78	44.966	ENSRBIG00000005742	GPATCH4	78	46.218	Rhinopithecus_bieti
ENSDARG00000091931	gpatch4	78	44.966	ENSRROG00000044157	GPATCH4	78	46.218	Rhinopithecus_roxellana
ENSDARG00000091931	gpatch4	64	50.806	ENSSHAG00000015436	-	67	49.010	Sarcophilus_harrisii
ENSDARG00000091931	gpatch4	82	77.019	ENSSDUG00000006583	gpatch4	55	76.126	Seriola_dumerili
ENSDARG00000091931	gpatch4	82	77.019	ENSSLDG00000012365	gpatch4	55	76.126	Seriola_lalandi_dorsalis
ENSDARG00000091931	gpatch4	82	55.696	ENSSPUG00000002674	GPATCH4	66	59.701	Sphenodon_punctatus
ENSDARG00000091931	gpatch4	82	74.691	ENSSPAG00000011683	gpatch4	52	77.885	Stegastes_partitus
ENSDARG00000091931	gpatch4	62	71.901	ENSTRUG00000020638	-	86	71.901	Takifugu_rubripes
ENSDARG00000091931	gpatch4	78	70.130	ENSTNIG00000005156	gpatch4	96	56.835	Tetraodon_nigroviridis
ENSDARG00000091931	gpatch4	65	44.000	ENSVVUG00000019904	-	95	44.000	Vulpes_vulpes
ENSDARG00000091931	gpatch4	78	38.764	ENSVVUG00000006004	-	82	47.059	Vulpes_vulpes
ENSDARG00000091931	gpatch4	86	58.182	ENSXETG00000020397	gpatch4	67	63.415	Xenopus_tropicalis
ENSDARG00000091931	gpatch4	82	71.875	ENSXCOG00000003911	gpatch4	55	74.762	Xiphophorus_couchianus
ENSDARG00000091931	gpatch4	82	71.429	ENSXMAG00000024520	gpatch4	55	74.408	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0005575	cellular_component	-	ND	Component
GO:0008150	biological_process	-	ND	Process