EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSDARG00000092027 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-20i20.9
Alias: -
Full Name: si:dkey-20i20.9
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 3878 bases
Position: chr22:2778600-2782477
Accession: ZDB-GENE-060503-152
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000120893	zf-C2H2	PF00096.26	4.5e-15	1	3
ENSDARP00000120893	zf-C2H2	PF00096.26	4.5e-15	2	3
ENSDARP00000120893	zf-C2H2	PF00096.26	4.5e-15	3	3
ENSDARP00000120893	zf-met	PF12874.7	8.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000134028	-	672	-	ENSDARP00000120893	224 (aa)	-	F1QKW6

Gene Model

Click here to download ENSDARG00000092027's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000092027's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000092027	si:dkey-20i20.9	72	72.807	ENSDARG00000094736	znf1157	95	72.807
ENSDARG00000092027	si:dkey-20i20.9	75	64.103	ENSDARG00000094309	si:ch73-92e7.6	95	70.732
ENSDARG00000092027	si:dkey-20i20.9	61	65.217	ENSDARG00000095704	si:dkey-4c15.13	97	69.231
ENSDARG00000092027	si:dkey-20i20.9	81	69.061	ENSDARG00000092246	si:dkey-20i20.3	87	70.930
ENSDARG00000092027	si:dkey-20i20.9	99	76.471	ENSDARG00000093562	si:dkey-20i20.7	99	83.333
ENSDARG00000092027	si:dkey-20i20.9	90	85.572	ENSDARG00000094343	si:dkey-20i20.8	94	85.641
ENSDARG00000092027	si:dkey-20i20.9	73	57.000	ENSDARG00000100587	zgc:113886	100	53.191
ENSDARG00000092027	si:dkey-20i20.9	69	51.299	ENSDARG00000077712	zgc:113886	96	51.020
ENSDARG00000092027	si:dkey-20i20.9	72	70.988	ENSDARG00000095455	si:dkey-20i20.10	90	70.988
ENSDARG00000092027	si:dkey-20i20.9	72	70.988	ENSDARG00000101885	si:dkey-20i20.11	98	70.122
ENSDARG00000092027	si:dkey-20i20.9	75	51.190	ENSDARG00000014775	zgc:113220	73	53.571
ENSDARG00000092027	si:dkey-20i20.9	94	60.377	ENSDARG00000101425	si:dkey-1b17.5	98	60.914
ENSDARG00000092027	si:dkey-20i20.9	72	61.350	ENSDARG00000092088	si:dkey-4c15.8	99	65.789
ENSDARG00000092027	si:dkey-20i20.9	95	59.901	ENSDARG00000102053	znf1164	100	68.908
ENSDARG00000092027	si:dkey-20i20.9	74	67.857	ENSDARG00000071725	znf1167	99	67.857
ENSDARG00000092027	si:dkey-20i20.9	75	58.621	ENSDARG00000071833	znf1162	100	65.132
ENSDARG00000092027	si:dkey-20i20.9	75	61.111	ENSDARG00000077085	zgc:110821	72	49.153
ENSDARG00000092027	si:dkey-20i20.9	66	65.101	ENSDARG00000093875	zgc:174224	85	61.250
ENSDARG00000092027	si:dkey-20i20.9	75	72.840	ENSDARG00000071714	znf983	97	71.951
ENSDARG00000092027	si:dkey-20i20.9	78	51.705	ENSDARG00000098898	si:ch211-255f4.2	99	50.000
ENSDARG00000092027	si:dkey-20i20.9	73	64.957	ENSDARG00000093672	zgc:171435	100	58.974

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000092027	si:dkey-20i20.9	73	54.878	ENSMZEG00005027943	-	59	51.250	Maylandia_zebra